Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G851.23 Capsicum annuum HOM05D005370 ORTHO05D006659 1.9e-129 466.1 272 100.0
Sopen04g034560 Solanum pennellii HOM05D005370 ORTHO05D006659 7.7e-99 364.4 256 83.2
Solyc04g080950.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 2.1e-96 356.3 254 82.3
PGSC0003DMG400003760 Solanum tuberosum HOM05D005370 ORTHO05D006659 4.8e-93 345.1 247 85.4
Peaxi162Scf00434g00622 Petunia axillaris HOM05D005370 ORTHO05D006659 1.4e-84 317.0 256 73.4
CSS0021022 Camellia sinensis var. sinensis HOM05D005370 ORTHO05D006659 6.8e-71 271.6 257 59.5
Cc01_g08030 Coffea canephora HOM05D005370 ORTHO05D006659 1.8e-68 263.5 252 60.7
Migut.D00369 Erythranthe guttata HOM05D005370 ORTHO05D006659 5.4e-68 261.9 255 58.0
TWI18G0973 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 3.8e-66 255.8 257 57.2
SGA_v2.0_scaffold3169G54286 Striga asiatica HOM05D005370 ORTHO05D006659 8.6e-66 254.6 255 57.3
SalBow4G0733 Salvia bowleyana HOM05D005370 ORTHO05D006659 1.5e-65 253.8 258 54.3
Nitab4.5_0001423g0070 Nicotiana tabacum HOM05D005370 ORTHO05D006659 4.7e-64 248.8 283 59.0
AUR62032263 Chenopodium quinoa HOM05D005370 ORTHO05D006659 8.0e-64 248.1 261 56.3
CiPaw.02G117200 Carya illinoinensis HOM05D005370 ORTHO05D006659 1.0e-63 247.7 265 55.1
SGA_v2.0_scaffold580G53040 Striga asiatica HOM05D005370 ORTHO05D006659 1.0e-63 247.7 253 55.7
Sabra02G0036500 Salix brachista HOM05D005370 ORTHO05D006659 1.4e-63 247.3 260 55.0
HanXRQChr02g0032381 Helianthus annuus HOM05D005370 ORTHO05D006659 1.8e-63 246.9 269 57.2
Lsat_1_v5_gn_8_94841 Lactuca sativa HOM05D005370 ORTHO05D006659 1.5e-62 243.8 253 55.7
TWI12G0023 Tripterygium wilfordii HOM05D005370 ORTHO05D006659 1.5e-62 243.8 257 54.1
ECA236G0510 Erigeron canadensis HOM05D005370 ORTHO05D006659 4.4e-62 242.3 254 54.7
COL.COLO4_15774 Corchorus olitorius HOM05D005370 ORTHO05D006659 7.5e-62 241.5 255 53.3
Manes.01G202000 Manihot esculenta HOM05D005370 ORTHO05D006659 1.3e-61 240.7 261 53.3
AUR62011949 Chenopodium quinoa HOM05D005370 ORTHO05D006659 1.7e-61 240.4 261 55.2
EL10Ac5g10469 Beta vulgaris HOM05D005370 ORTHO05D006659 2.2e-61 240.0 259 58.3
Potri.002G045500 Populus trichocarpa HOM05D005370 ORTHO05D006659 2.9e-61 239.6 259 53.7
Ah.11g050020 Amaranthus hybridus HOM05D005370 ORTHO05D006659 4.9e-61 238.8 260 54.2
Nn3g19501 Nelumbo nucifera HOM05D005370 ORTHO05D006659 8.3e-61 238.0 261 54.0
GSVIVG01018102001 Vitis vinifera HOM05D005370 ORTHO05D006659 8.3e-61 238.0 255 53.7
Prupe.1G175900 Prunus persica HOM05D005370 ORTHO05D006659 9.2e-60 234.6 255 51.8
Gorai.005G046600 Gossypium raimondii HOM05D005370 ORTHO05D006659 2.0e-59 233.4 259 52.9
Cfa018256 Carpinus fangiana HOM05D005370 ORTHO05D006659 3.5e-59 232.6 273 50.9
Thecc.04G244800 Theobroma cacao HOM05D005370 ORTHO05D006659 3.5e-59 232.6 258 52.7
Gohir.D02G042266 Gossypium hirsutum HOM05D005370 ORTHO05D006659 7.8e-59 231.5 259 52.5
Ciclev10006717m.g Citrus clementina HOM05D005370 ORTHO05D006659 3.0e-58 229.6 256 50.0
MBI15_g19756_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 6.6e-58 228.4 257 52.9
CANSAT11G0223 Cannabis sativa HOM05D005370 ORTHO05D006659 1.9e-57 226.9 256 53.1
DCAR_023471 Daucus carota HOM05D005370 ORTHO05D006659 1.9e-57 226.9 268 50.0
Gohir.A02G035301 Gossypium hirsutum HOM05D005370 ORTHO05D006659 1.9e-57 226.9 259 51.4
DCAR_028371 Daucus carota HOM05D005370 ORTHO05D006659 3.3e-57 226.1 268 49.6
RcHm_v2.0_Chr4g0389631 Rosa chinensis HOM05D005370 ORTHO05D006659 4.3e-57 225.7 256 48.8
Aqoxy3G04193 Aquilegia oxysepala HOM05D005370 ORTHO05D006659 9.5e-57 224.6 257 50.2
CANSAT11G2293 Cannabis sativa HOM05D005370 ORTHO05D006659 1.2e-56 224.2 260 52.7
Lalb_Chr02g0142451 Lupinus albus HOM05D005370 ORTHO05D006659 2.1e-56 223.4 255 53.3
Phvul.007G177000 Phaseolus vulgaris HOM05D005370 ORTHO05D006659 2.1e-56 223.4 255 52.9
QL06p015215 Quercus lobata HOM05D005370 ORTHO05D006659 2.1e-56 223.4 255 49.8
Ca_24537_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 2.8e-56 223.0 253 53.8
Actinidia27521 Actinidia chinensis HOM05D005370 ORTHO05D006659 3.6e-56 222.6 264 52.3
Ca_14753_v3 Cicer arietinum L. HOM05D005370 ORTHO05D006659 3.6e-56 222.6 253 53.4
FvH4_4g02310 Fragaria vesca HOM05D005370 ORTHO05D006659 6.2e-56 221.9 258 48.1
FAN22G1699 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.4e-55 220.7 256 47.7
FAN17G2982 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.8e-55 220.3 256 48.0
MELO3C005475.2 Cucumis melo HOM05D005370 ORTHO05D006659 2.3e-55 219.9 265 51.3
Oeu025788.2 Olea europaea HOM05D005370 ORTHO05D006659 5.2e-55 218.8 220 59.5
Lj5g0014373 Lotus japonicus HOM05D005370 ORTHO05D006659 1.5e-54 217.2 255 52.9
Duzib052G0322 Durio zibethinus HOM05D005370 ORTHO05D006659 2.0e-54 216.9 299 44.8
Sed0023556 Sechium edule HOM05D005370 ORTHO05D006659 2.6e-54 216.5 260 49.2
VMungo0720G0865 Vigna mungo HOM05D005370 ORTHO05D006659 2.6e-54 216.5 254 52.8
CsaV3_5G004690 Cucumis sativus L. HOM05D005370 ORTHO05D006659 2.9e-53 213.0 265 50.6
Nitab4.5_0002156g0030 Nicotiana tabacum HOM05D005370 ORTHO05D006659 8.3e-53 211.5 123 89.4
Nitab4.5_0001840g0120 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.1e-52 211.1 123 89.4
PSO238G0055 Papaver somniferum HOM05D005370 ORTHO05D006659 1.6e-51 207.2 258 48.1
TAR362G0430 Trochodendron aralioides HOM05D005370 ORTHO05D006659 2.7e-51 206.5 252 50.8
HPP92_015262 Vanilla planifolia HOM05D005370 ORTHO05D006659 4.6e-51 205.7 254 50.4
Medtr1g070900 Medicago truncatula HOM05D005370 ORTHO05D006659 1.0e-50 204.5 254 50.4
PSO210G0029 Papaver somniferum HOM05D005370 ORTHO05D006659 1.0e-50 204.5 261 49.4
Sopen01g042090 Solanum pennellii HOM05D005370 ORTHO05D006659 1.0e-50 204.5 187 61.5
PGSC0003DMG400017885 Solanum tuberosum HOM05D005370 ORTHO05D006659 1.7e-50 203.8 123 87.0
CDE07G1268 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 2.3e-50 203.4 257 48.2
Dinv22486 Davidia involucrata HOM05D005370 ORTHO05D006659 3.0e-50 203.0 219 54.8
Nn1g02548 Nelumbo nucifera HOM05D005370 ORTHO05D000069 2.5e-49 199.9 220 53.2
ATR0665G285 Amborella trichopoda HOM05D005370 ORTHO05D006659 1.2e-48 197.6 265 46.8
Glyma.10G031500 Glycine max HOM05D005370 ORTHO05D006659 4.7e-48 195.7 253 48.6
FAN12G2588 Fragaria x ananassa HOM05D005370 ORTHO05D006659 1.1e-47 194.5 241 46.5
Prupe.2G050700 Prunus persica HOM05D005370 ORTHO05D006659 2.3e-47 193.4 255 45.5
Haze_11274 Corylus avellana HOM05D005370 ORTHO05D006659 1.2e-46 191.0 230 51.7
arahy.Tifrunner.gnm1.ann1.XNPI4G Arachis hypogaea HOM05D005370 ORTHO05D006659 4.4e-46 189.1 254 47.2
Sc24g0004270 Simmondsia chinensis HOM05D005370 ORTHO05D006659 9.8e-46 188.0 227 49.8
arahy.Tifrunner.gnm1.ann1.T9F7M4 Arachis hypogaea HOM05D005370 ORTHO05D006659 1.3e-45 187.6 231 50.6
MD04G1026200 Malus domestica HOM05D005370 ORTHO05D006659 1.4e-44 184.1 223 48.9
ClCG01G004480 Citrullus lanatus HOM05D005370 ORTHO05D006659 5.4e-44 182.2 228 49.6
arahy.Tifrunner.gnm1.ann1.7J2YFM Arachis hypogaea HOM05D005370 ORTHO05D006659 2.1e-43 180.3 252 46.0
Cpa.g.sc58.39 Carica papaya HOM05D005370 ORTHO05D006659 1.0e-42 177.9 225 48.4
MSTRG.18281 Avicennia marina HOM05D005370 ORTHO05D006659 1.5e-41 174.1 121 74.4
Hund02875 Selenicereus undatus HOM05D005370 ORTHO05D006659 1.2e-40 171.0 253 42.3
SGA_v2.0_scaffold138G35287 Striga asiatica HOM05D005370 ORTHO05D006659 3.6e-40 169.5 99 86.9
Nitab4.5_0001903g0040 Nicotiana tabacum HOM05D005370 ORTHO05D006659 3.1e-39 166.4 95 89.5
Haze_21184 Corylus avellana HOM05D005370 ORTHO05D006659 7.6e-38 161.8 311 38.9
Zm00001eb201750 Zea mays HOM05D005370 ORTHO05D006659 1.1e-36 157.9 263 37.6
AT5G43680 Arabidopsis thaliana HOM05D005370 ORTHO05D006659 2.4e-36 156.8 265 40.8
CDE03G0266 Ceratophyllum demersum HOM05D005370 ORTHO05D006659 4.1e-36 156.0 221 44.8
Glyma.02G142900 Glycine max HOM05D005370 ORTHO05D006659 5.4e-36 155.6 103 77.7
AL8G16570 Arabidopsis lyrata HOM05D005370 ORTHO05D006659 7.1e-36 155.2 265 42.6
BcaC06g34636 Brassica carinata HOM05D005370 ORTHO05D006659 7.1e-36 155.2 250 40.8
C07p26250 Brassica napus HOM05D005370 ORTHO05D006659 7.1e-36 155.2 250 40.8
BolC7t43153H Brassica oleracea HOM05D005370 ORTHO05D006659 7.1e-36 155.2 250 40.8
BcaC06g31683 Brassica carinata HOM05D005370 ORTHO05D006659 9.2e-36 154.8 252 43.7
BraA06t27643Z Brassica rapa HOM05D005370 ORTHO05D006659 3.5e-35 152.9 252 42.5
Thhalv10017901m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 3.5e-35 152.9 258 39.5
A06p47750 Brassica napus HOM05D005370 ORTHO05D006659 6.0e-35 152.1 250 42.4
Sp2g08480 Schrenkiella parvula HOM05D005370 ORTHO05D006659 7.8e-35 151.8 251 39.4
TPR.G39035 Trifolium pratense HOM05D005370 ORTHO05D000069 1.7e-34 150.6 95 81.1
CARHR179930 Cardamine hirsuta HOM05D005370 ORTHO05D006659 2.3e-34 150.2 253 39.9
Carub.0008s0497 Capsella rubella HOM05D005370 ORTHO05D006659 6.6e-34 148.7 264 39.4
Eucgr.G02606 Eucalyptus grandis HOM05D005370 ORTHO05D006659 2.5e-33 146.7 198 47.5
Mapoly0029s0143 Marchantia polymorpha HOM05D005370 ORTHO05D006659 2.5e-33 146.7 254 38.6
Psat5g092160 Pisum sativum HOM05D009633 ORTHO05D011907 3.6e-32 142.9 100 73.0
Psat3g119240 Pisum sativum HOM05D005370 ORTHO05D006659 6.2e-32 142.1 241 42.3
SGA_v2.0_scaffold1G00551 Striga asiatica HOM05D006471 ORTHO05D008157 1.1e-31 141.4 100 74.0
Prupe.1G027700 Prunus persica HOM05D005370 ORTHO05D006659 1.2e-30 137.9 202 44.1
Aa31LG5G3560 Aethionema arabicum HOM05D005370 ORTHO05D006659 6.4e-29 132.1 249 36.5
Pp3c17_23420 Physcomitrium patens HOM05D005370 ORTHO05D006659 3.5e-27 126.3 247 35.6
Nn8g40523 Nelumbo nucifera HOM05D005370 ORTHO05D006659 2.1e-24 117.1 103 62.1
Actinidia19979 Actinidia chinensis HOM05D005370 ORTHO05D006659 4.5e-22 109.4 96 60.4
AagrBONN_evm.TU.Sc2ySwM_228.5248 Anthoceros agrestis HOM05D005370 ORTHO05D006659 9.9e-22 108.2 228 33.3
Cc01_g05520 Coffea canephora HOM05D005370 ORTHO05D006659 1.7e-21 107.5 168 44.0
Psat1g083920 Pisum sativum HOM05D005370 ORTHO05D006659 4.9e-21 105.9 184 39.1
CBR_g32014 Chara braunii HOM05D005370 ORTHO05D006659 6.4e-21 105.5 278 30.6
Psat0s8363g0040 Pisum sativum HOM05D005370 ORTHO05D006659 6.4e-21 105.5 184 39.1
Os11g0550900 Oryza sativa ssp. japonica HOM05D005370 ORTHO05D006659 1.4e-20 104.4 256 30.5
Nitab4.5_0004235g0010 Nicotiana tabacum HOM05D005370 ORTHO05D006659 1.9e-20 104.0 62 85.5
Cc01_g05510 Coffea canephora HOM05D005370 ORTHO05D006659 1.9e-17 94.0 62 77.4
Psat3g119160 Pisum sativum HOM05D005370 ORTHO05D006659 8.1e-16 88.6 149 38.3
SEGI_11901 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 1.1e-15 88.2 66 68.2
Duzib212G0616 Durio zibethinus HOM05D005370 ORTHO05D006659 4.0e-15 86.3 199 35.7
MBI11_g15920_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.0e-14 84.0 160 37.5
Solyc01g098540.3 Solanum lycopersicum HOM05D005370 ORTHO05D006659 5.8e-14 82.4 62 75.8
Psat3g119360 Pisum sativum HOM05D005370 ORTHO05D006659 9.9e-14 81.6 53 77.4
CAN.G257.103 Capsicum annuum HOM05D005370 ORTHO05D006659 1.3e-13 81.3 54 74.1
MBI16_g44196_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 1.3e-13 81.3 168 37.5
MBI18_g19775_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 4.2e-12 76.3 186 33.3
MBI02_g40862_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 2.7e-11 73.6 53 67.9
Thhalv10003352m.g Eutrema salsugineum HOM05D005370 ORTHO05D006659 1.8e-10 70.9 118 39.8
SEGI_21191 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.3e-10 70.5 110 41.8
MBI16_g45671_MAGBIO Magnolia biondii HOM05D005370 ORTHO05D006659 5.1e-10 69.3 199 31.2
Psat1g084080 Pisum sativum HOM05D005370 ORTHO05D006659 7.4e-09 65.5 150 32.7
SMO116G0410 Selaginella moellendorffii HOM05D005370 ORTHO05D006659 2.8e-08 63.5 219 28.3
SEGI_37606 Sequoiadendron giganteum HOM05D005370 ORTHO05D006659 2.6e-06 57.0 57 47.4
MCO01G785 Micromonas commoda HOM05D005370 ORTHO05D006659 4.5e-06 56.2 80 32.5


User provided reference genes

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