Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G85.9 Capsicum annuum HOM05D006205 ORTHO05D007703 4.7e-213 744.2 361 100.0
PGSC0003DMG400012937 Solanum tuberosum HOM05D006205 ORTHO05D007703 6.4e-202 707.2 361 94.2
Nitab4.5_0006846g0010 Nicotiana tabacum HOM05D006205 ORTHO05D007703 1.2e-200 703.0 361 92.2
Sopen03g017680 Solanum pennellii HOM05D006205 ORTHO05D007703 8.1e-197 690.3 361 92.2
Solyc03g064030.3 Solanum lycopersicum HOM05D006205 ORTHO05D007703 1.1e-196 689.9 361 92.2
Prupe.7G072500 Prunus persica HOM05D006205 ORTHO05D007703 2.4e-193 678.7 361 88.9
Dinv24098 Davidia involucrata HOM05D006205 ORTHO05D007703 1.7e-191 672.5 361 87.5
Gohir.A01G194800 Gossypium hirsutum HOM05D006205 ORTHO05D007703 5.1e-191 671.0 361 87.0
Actinidia17259 Actinidia chinensis HOM05D006205 ORTHO05D007703 8.7e-191 670.2 361 87.0
CSS0013544 Camellia sinensis var. sinensis HOM05D006205 ORTHO05D007703 8.7e-191 670.2 361 87.8
Gorai.002G228500 Gossypium raimondii HOM05D006205 ORTHO05D007703 1.5e-190 669.5 361 86.7
Manes.09G031300 Manihot esculenta HOM05D006205 ORTHO05D007703 1.9e-190 669.1 361 86.1
Ciclev10031918m.g Citrus clementina HOM05D006205 ORTHO05D007703 3.3e-190 668.3 359 87.2
Duzib106G0917 Durio zibethinus HOM05D006205 ORTHO05D007703 2.8e-189 665.2 361 86.4
Gohir.D01G185000 Gossypium hirsutum HOM05D006205 ORTHO05D007703 4.8e-189 664.5 361 86.4
Thecc.05G167100 Theobroma cacao HOM05D006205 ORTHO05D007703 4.8e-189 664.5 361 86.7
PGR142G1368 Punica granatum HOM05D006205 ORTHO05D007703 1.4e-188 662.9 361 85.6
MSTRG.26097 Avicennia marina HOM05D006205 ORTHO05D007703 1.8e-188 662.5 361 86.7
Hund19180 Selenicereus undatus HOM05D006205 ORTHO05D007703 6.9e-188 660.6 361 86.4
Ca_08497_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 85.9
Ca_29722_v3 Cicer arietinum L. HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 85.9
Lju124A32T75 Lonicera japonica HOM05D006205 ORTHO05D007703 9.0e-188 660.2 361 86.4
Haze_19942 Corylus avellana HOM05D006205 ORTHO05D007703 1.2e-187 659.8 357 87.4
Duzib093G1988 Durio zibethinus HOM05D006205 ORTHO05D007703 2.6e-187 658.7 361 85.6
Hma1.2p1_1575F.1_g291620 Hydrangea macrophylla HOM05D006205 ORTHO05D007703 3.4e-187 658.3 359 85.2
Lsat_1_v5_gn_8_79241 Lactuca sativa HOM05D006205 ORTHO05D007703 4.5e-187 657.9 361 85.6
TPR.G4691 Trifolium pratense HOM05D006205 ORTHO05D007703 5.8e-187 657.5 361 85.9
TAR623G1003 Trochodendron aralioides HOM05D006205 ORTHO05D007703 7.6e-187 657.1 361 85.9
arahy.Tifrunner.gnm1.ann1.68EW5P Arachis hypogaea HOM05D006205 ORTHO05D007703 2.9e-186 655.2 358 85.5
Cpa.g.sc85.111 Carica papaya HOM05D006205 ORTHO05D007703 3.8e-186 654.8 361 85.3
Glyma.19G144900 Glycine max HOM05D006205 ORTHO05D007703 4.9e-186 654.4 361 85.0
arahy.Tifrunner.gnm1.ann1.ARGW3J Arachis hypogaea HOM05D006205 ORTHO05D007703 6.4e-186 654.1 358 85.2
Sabra16G0053600 Salix brachista HOM05D006205 ORTHO05D007703 8.4e-186 653.7 361 83.4
Eucgr.K01821 Eucalyptus grandis HOM05D006205 ORTHO05D007703 1.1e-185 653.3 361 85.0
CiPaw.09G032800 Carya illinoinensis HOM05D006205 ORTHO05D007703 1.4e-185 652.9 359 85.5
Potri.016G049700 Populus trichocarpa HOM05D006205 ORTHO05D007703 2.4e-185 652.1 361 83.4
VMungo1383G0076 Vigna mungo HOM05D006205 ORTHO05D007703 2.4e-185 652.1 361 83.9
SGA_v2.0_scaffold94G28443 Striga asiatica HOM05D006205 ORTHO05D007703 1.2e-184 649.8 362 85.1
Sed0025317 Sechium edule HOM05D006205 ORTHO05D007703 1.6e-184 649.4 361 84.8
Potri.006G058400 Populus trichocarpa HOM05D006205 ORTHO05D007703 3.5e-184 648.3 361 83.1
Lalb_Chr18g0047621 Lupinus albus HOM05D006205 ORTHO05D007703 1.8e-183 646.0 361 84.5
Phvul.001G139800 Phaseolus vulgaris HOM05D006205 ORTHO05D007703 1.8e-183 646.0 361 83.7
Psat3g069960 Pisum sativum HOM05D006205 ORTHO05D007703 1.8e-183 646.0 361 84.5
vmacro09103 Vaccinium macrocarpon HOM05D006205 ORTHO05D007703 2.3e-183 645.6 371 83.3
QL07p022686 Quercus lobata HOM05D006205 ORTHO05D007703 5.1e-183 644.4 359 85.2
DCAR_013564 Daucus carota HOM05D006205 ORTHO05D007703 6.7e-183 644.0 358 84.6
Medtr7g092680 Medicago truncatula HOM05D006205 ORTHO05D007703 6.7e-183 644.0 361 85.0
FvH4_6g22800 Fragaria vesca HOM05D006205 ORTHO05D007703 1.5e-182 642.9 360 85.6
FAN14G5729 Fragaria x ananassa HOM05D006205 ORTHO05D007703 1.5e-182 642.9 360 85.6
CANSAT64G2514 Cannabis sativa HOM05D006205 ORTHO05D007703 2.5e-182 642.1 357 84.9
Cc06_g16310 Coffea canephora HOM05D006205 ORTHO05D007703 2.5e-182 642.1 359 83.3
FAN02G0014 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.5e-182 642.1 360 85.3
Sabra06G0041700 Salix brachista HOM05D006205 ORTHO05D007703 5.6e-182 641.0 361 82.5
THA.LOC104809921 Tarenaya hassleriana HOM05D006205 ORTHO05D007703 5.6e-182 641.0 358 82.7
MELO3C009648.2 Cucumis melo HOM05D006205 ORTHO05D007703 7.4e-182 640.6 387 79.1
Sc25g0005160 Simmondsia chinensis HOM05D006205 ORTHO05D007703 9.6e-182 640.2 359 83.8
EL10Ac3g06974 Beta vulgaris HOM05D006205 ORTHO05D007703 2.8e-181 638.6 361 83.7
Nn2g15532 Nelumbo nucifera HOM05D006205 ORTHO05D007703 3.7e-181 638.3 360 83.9
AUR62024356 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.4e-180 635.6 360 83.3
FAN05G5560 Fragaria x ananassa HOM05D006205 ORTHO05D007703 2.4e-180 635.6 360 84.7
RcHm_v2.0_Chr3g0480421 Rosa chinensis HOM05D006205 ORTHO05D007703 5.3e-180 634.4 360 84.4
HanXRQChr05g0132791 Helianthus annuus HOM05D006205 ORTHO05D007703 6.9e-180 634.0 360 81.9
Lj1g0022121 Lotus japonicus HOM05D006205 ORTHO05D007703 1.2e-179 633.3 396 77.3
Migut.K00057 Erythranthe guttata HOM05D006205 ORTHO05D007703 3.4e-179 631.7 361 82.0
Aqoxy1G00212 Aquilegia oxysepala HOM05D006205 ORTHO05D007703 2.5e-177 625.5 361 81.4
Carub.0003s1152 Capsella rubella HOM05D006205 ORTHO05D007703 2.5e-177 625.5 359 81.1
SalBow1G2518 Salvia bowleyana HOM05D006205 ORTHO05D007703 2.5e-177 625.5 401 76.1
ClCG10G017350 Citrullus lanatus HOM05D006205 ORTHO05D007703 3.2e-177 625.2 428 72.2
AL3G23830 Arabidopsis lyrata HOM05D006205 ORTHO05D007703 4.6e-176 621.3 359 79.9
TWI74G1063 Tripterygium wilfordii HOM05D006205 ORTHO05D007703 6.0e-176 620.9 341 84.8
Sp3g10390 Schrenkiella parvula HOM05D006205 ORTHO05D007703 1.0e-175 620.2 359 79.9
AUR62025960 Chenopodium quinoa HOM05D006205 ORTHO05D007703 2.3e-175 619.0 360 82.5
QL93p2022_0017 Quercus lobata HOM05D006205 ORTHO05D007703 5.1e-175 617.8 417 73.4
AT3G12150 Arabidopsis thaliana HOM05D006205 ORTHO05D007703 6.7e-175 617.5 359 79.4
Thhalv10021002m.g Eutrema salsugineum HOM05D006205 ORTHO05D007703 1.9e-174 615.9 359 80.2
BraA05t22513Z Brassica rapa HOM05D006205 ORTHO05D007703 2.1e-173 612.5 359 78.3
A05p37150 Brassica napus HOM05D006205 ORTHO05D007703 8.2e-173 610.5 359 78.3
C05p55580 Brassica napus HOM05D006205 ORTHO05D007703 8.2e-173 610.5 359 78.3
BolC5t34227H Brassica oleracea HOM05D006205 ORTHO05D007703 8.2e-173 610.5 359 78.3
BcaC05g29277 Brassica carinata HOM05D006205 ORTHO05D007703 1.1e-172 610.1 359 78.0
CDE10G0043 Ceratophyllum demersum HOM05D006205 ORTHO05D007703 1.8e-172 609.4 357 80.7
Aa31LG3G6360 Aethionema arabicum HOM05D006205 ORTHO05D007703 2.4e-172 609.0 387 74.4
PSO384G4504 Papaver somniferum HOM05D006205 ORTHO05D007703 3.1e-172 608.6 357 78.4
ATR0605G163 Amborella trichopoda HOM05D006205 ORTHO05D007703 1.0e-170 603.6 357 78.7
PSO339G0108 Papaver somniferum HOM05D006205 ORTHO05D007703 2.9e-170 602.1 358 77.7
Nitab4.5_0000016g0140 Nicotiana tabacum HOM05D006205 ORTHO05D007703 3.8e-170 601.7 361 81.2
BraA03t12906Z Brassica rapa HOM05D006205 ORTHO05D007703 1.1e-169 600.1 359 77.4
BcaC01g04062 Brassica carinata HOM05D006205 ORTHO05D007703 1.9e-169 599.4 359 77.4
A03p37470 Brassica napus HOM05D006205 ORTHO05D007703 4.2e-169 598.2 359 77.2
C03p45470 Brassica napus HOM05D006205 ORTHO05D007703 5.5e-169 597.8 361 77.0
BolC3t16816H Brassica oleracea HOM05D006205 ORTHO05D007703 1.6e-168 596.3 361 76.7
unitig_899.g15081 Utricularia gibba HOM05D006205 ORTHO05D007703 4.6e-168 594.7 359 78.6
Zm00001eb236370 Zea mays HOM05D006205 ORTHO05D007703 1.3e-162 576.6 366 73.0
GSVIVG01033369001 Vitis vinifera HOM05D006205 ORTHO05D007703 1.7e-162 576.2 314 86.6
Os02g0195000 Oryza sativa ssp. japonica HOM05D006205 ORTHO05D007703 5.0e-162 574.7 366 72.7
SEGI_33856 Sequoiadendron giganteum HOM05D006205 ORTHO05D007703 4.2e-161 571.6 357 75.1
Cfa016888 Carpinus fangiana HOM05D006205 ORTHO05D007703 2.0e-155 552.7 302 87.7
BcaB04g18694 Brassica carinata HOM05D006205 ORTHO05D007703 8.5e-154 547.4 336 75.9
MD12G1062300 Malus domestica HOM05D006205 ORTHO05D007703 8.5e-154 547.4 306 85.0
ECA236G0538 Erigeron canadensis HOM05D006205 ORTHO05D007703 2.1e-152 542.7 314 82.5
SMO334G0020 Selaginella moellendorffii HOM05D006205 ORTHO05D007703 2.2e-146 522.7 357 69.7
Rhsim04G0098500 Rhododendron simsii HOM05D006205 ORTHO05D007703 8.0e-144 514.2 403 64.5
Mapoly0096s0035 Marchantia polymorpha HOM05D006205 ORTHO05D007703 1.4e-143 513.5 357 67.5
Ah.13g076130 Amaranthus hybridus HOM05D006205 ORTHO05D007703 1.8e-143 513.1 359 72.4
Pp3c3_27370 Physcomitrium patens HOM05D006205 ORTHO05D007703 6.3e-141 504.6 357 66.1
AagrBONN_evm.TU.Sc2ySwM_228.3151 Anthoceros agrestis HOM05D006205 ORTHO05D007703 1.1e-137 493.8 358 66.8
Peaxi162Scf00285g00443 Petunia axillaris HOM05D006205 ORTHO05D007703 9.4e-137 490.7 361 69.5
CsaV3_3G039050 Cucumis sativus L. HOM05D006205 ORTHO05D007703 7.2e-129 464.5 252 86.9
SalBow1G2557 Salvia bowleyana HOM05D006205 ORTHO05D007703 1.2e-128 463.8 365 65.5
COL.COLO4_36119 Corchorus olitorius HOM05D006205 ORTHO05D007703 4.4e-126 455.3 241 89.6
CBR_g25855 Chara braunii HOM05D006205 ORTHO05D007703 9.8e-126 454.1 368 60.9
HPP92_023778 Vanilla planifolia HOM05D006205 ORTHO05D007703 7.3e-113 411.4 239 82.0
Dinv18116 Davidia involucrata HOM05D006205 ORTHO05D007703 1.2e-107 394.0 211 87.2
CARHR086730 Cardamine hirsuta HOM05D006205 ORTHO05D007703 1.2e-99 367.5 205 83.9
Glyma.02G176500 Glycine max HOM05D006205 ORTHO05D007703 3.9e-74 282.7 180 76.7
MBI04_g47239_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 9.6e-65 251.5 152 75.7
MBI04_g14269_MAGBIO Magnolia biondii HOM05D006205 ORTHO05D007703 2.7e-59 233.4 161 69.6
MD14G1062900 Malus domestica HOM05D006205 ORTHO05D007703 4.8e-56 222.6 126 82.5
Actinidia33641 Actinidia chinensis HOM05D006205 ORTHO05D007703 5.3e-55 219.2 119 81.5
Cre02.g076150 Chlamydomonas reinhardtii HOM05D006205 ORTHO05D007703 1.3e-48 198.0 370 35.9
MD14G1062700 Malus domestica HOM05D006205 ORTHO05D007703 1.8e-47 194.1 207 51.2
VMungo1080G0431 Vigna mungo HOM05D006205 ORTHO05D007703 8.2e-40 168.7 98 83.7
arahy.Tifrunner.gnm1.ann1.EV0IJD Arachis hypogaea HOM05D006205 ORTHO05D007703 8.8e-34 148.7 117 65.8
MD12G1062200 Malus domestica HOM05D006205 ORTHO05D007703 3.3e-25 120.2 59 89.8
VMungo0331G0486 Vigna mungo HOM05D006205 ORTHO05D007703 9.1e-23 112.1 111 54.1
Medtr0001s0010 Medicago truncatula HOM05D006205 ORTHO05D007703 7.2e-20 102.4 79 67.1
Glyma.02G176400 Glycine max HOM05D006205 ORTHO05D007703 1.4e-15 88.2 51 74.5
Rhsim04G0098400 Rhododendron simsii HOM05D000259 ORTHO05D000155 3.8e-13 80.1 37 89.2
BcaC01g04094 Brassica carinata HOM05D001227 ORTHO05D001082 1.1e-12 78.6 166 34.3
MCO07G325 Micromonas commoda HOM05D006205 ORTHO05D007703 3.1e-07 60.5 248 25.4


User provided reference genes

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