Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G85.6 Capsicum annuum HOM05D004473 ORTHO05D005652 3.7e-85 318.2 159 100.0
CAN.G939.10 Capsicum annuum HOM05D004473 ORTHO05D005652 3.7e-85 318.2 159 100.0
PGSC0003DMG400041047 Solanum tuberosum HOM05D004473 ORTHO05D005652 5.0e-82 307.8 159 96.2
Solyc00g500048.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
Solyc00g500131.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
Solyc00g500201.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
Solyc00g500295.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
Solyc00g500330.1 Solanum lycopersicum HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
Sopen01g008040 Solanum pennellii HOM05D004473 ORTHO05D005652 2.7e-80 302.0 159 95.0
CAN.G100.39 Capsicum annuum HOM05D004473 ORTHO05D005652 5.2e-79 297.7 159 94.3
Nitab4.5_0011099g0050 Nicotiana tabacum HOM05D004473 ORTHO05D005652 8.8e-79 297.0 159 93.1
CAN.G1738.12 Capsicum annuum HOM05D004473 ORTHO05D005652 3.5e-75 285.0 145 97.9
Hma1.2p1_4210F.1_g338470 Hydrangea macrophylla HOM05D004473 ORTHO05D005652 1.1e-68 263.5 159 84.9
DCAR_032465 Daucus carota HOM05D004473 ORTHO05D005652 8.5e-66 253.8 158 79.7
SalBow1G8010 Salvia bowleyana HOM05D004473 ORTHO05D005652 1.2e-64 250.0 158 79.1
EL10As2g23210 Beta vulgaris HOM05D004473 ORTHO05D005652 1.0e-63 246.9 154 77.3
Lj2P1238T61 Lonicera japonica HOM05D004473 ORTHO05D005652 8.8e-63 243.8 159 76.7
Lj2P1239T154 Lonicera japonica HOM05D004473 ORTHO05D005652 8.8e-63 243.8 159 76.7
HanXRQChr00c0368g0574161 Helianthus annuus HOM05D004473 ORTHO05D005652 4.4e-62 241.5 157 75.8
HanXRQCPg0579741 Helianthus annuus HOM05D004473 ORTHO05D005652 4.4e-62 241.5 157 75.8
Lsat_1_v5_gn_7_76981 Lactuca sativa HOM05D004473 ORTHO05D005652 4.4e-62 241.5 159 75.5
Hund29000 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.5e-62 240.7 156 76.9
Hund29659 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.5e-62 240.7 156 76.9
Hund30056 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.5e-62 240.7 156 76.9
Hund30352 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.5e-62 240.7 156 76.9
Hund29400 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.2e-61 239.2 156 76.3
Hund28272 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.8e-61 238.8 156 76.3
Hund29926 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.9e-61 238.0 156 75.6
Peaxi162Scf00211g00223 Petunia axillaris HOM05D004473 ORTHO05D005652 4.1e-60 235.0 122 95.9
Potri.013G138201 Populus trichocarpa HOM05D004473 ORTHO05D005652 3.5e-59 231.9 159 71.1
ScUNg0001290 Simmondsia chinensis HOM05D004473 ORTHO05D005652 7.7e-59 230.7 159 71.1
PSO548G0076 Papaver somniferum HOM05D004473 ORTHO05D005652 1.0e-58 230.3 159 73.0
RcHm_v2.0_CPg0502521 Rosa chinensis HOM05D004473 ORTHO05D005652 8.6e-58 227.3 159 71.1
Sed0024057 Sechium edule HOM05D004473 ORTHO05D005652 1.9e-57 226.1 159 73.0
Atru.chr6.757 Acer truncatum HOM05D004473 ORTHO05D005652 4.2e-57 224.9 157 70.7
Sed0017792 Sechium edule HOM05D004473 ORTHO05D005652 7.2e-57 224.2 159 72.3
Medtr0002s0390 Medicago truncatula HOM05D004473 ORTHO05D005652 9.5e-57 223.8 157 71.3
Lalb_Chr07g0191541 Lupinus albus HOM05D004473 ORTHO05D005652 2.1e-56 222.6 162 70.4
Medtr3g035685 Medicago truncatula HOM05D004473 ORTHO05D005652 1.0e-55 220.3 157 72.6
Hund27810 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.0e-55 218.4 156 71.8
ATCG00040 Arabidopsis thaliana HOM05D004473 ORTHO05D005652 6.8e-55 217.6 159 68.6
HanXRQChr00c0126g0571831 Helianthus annuus HOM05D004473 ORTHO05D005652 8.9e-55 217.2 144 73.6
Medtr7g021760 Medicago truncatula HOM05D004473 ORTHO05D005652 8.9e-55 217.2 157 72.0
TWI34G1450 Tripterygium wilfordii HOM05D004473 ORTHO05D005652 2.6e-54 215.7 155 69.7
PGR111G0117 Punica granatum HOM05D004473 ORTHO05D005652 4.4e-54 214.9 153 73.2
C06p21390 Brassica napus HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BolC2t10578H Brassica oleracea HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BolSC37t60777H Brassica oleracea HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BolSC45t60885H Brassica oleracea HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BolSC45t60929H Brassica oleracea HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BolSC46t60978H Brassica oleracea HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BraSC143t45676Z Brassica rapa HOM05D004473 ORTHO05D005652 9.8e-54 213.8 159 66.7
BcaC05g28805 Brassica carinata HOM05D004473 ORTHO05D005652 8.3e-53 210.7 159 65.4
Hund25918 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.6e-51 206.5 156 68.6
Hund10684 Selenicereus undatus HOM05D004473 ORTHO05D005652 5.9e-51 204.5 148 70.3
Eucgr.D00924 Eucalyptus grandis HOM05D004473 ORTHO05D005652 1.7e-50 203.0 159 67.3
Migut.D01408 Erythranthe guttata HOM05D004473 ORTHO05D005652 2.9e-50 202.2 156 67.3
HanXRQChr00c0125g0571751 Helianthus annuus HOM05D004473 ORTHO05D005652 6.6e-50 201.1 157 66.2
GSVIVG01022885001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.1e-49 200.3 167 64.1
CAN.G575.33 Capsicum annuum HOM05D004473 ORTHO05D000001 2.5e-49 199.1 119 84.9
LjContig00489g0020099 Lotus japonicus HOM05D004473 ORTHO05D005652 1.4e-47 193.4 159 66.7
Peaxi162Scf00219g00048 Petunia axillaris HOM05D004473 ORTHO05D001250 6.8e-47 191.0 138 76.8
arahy.Tifrunner.gnm1.ann1.3DS1LI Arachis hypogaea HOM05D004473 ORTHO05D005652 4.4e-46 188.3 146 67.8
arahy.Tifrunner.gnm1.ann1.SGP77C Arachis hypogaea HOM05D004473 ORTHO05D005652 4.4e-46 188.3 146 67.8
HanXRQChr11g0326581 Helianthus annuus HOM05D004473 ORTHO05D005652 1.7e-45 186.4 157 61.8
LjContig00318g0021272 Lotus japonicus HOM05D004473 ORTHO05D005652 1.7e-45 186.4 147 66.0
Medtr4g051280 Medicago truncatula HOM05D004473 ORTHO05D005652 7.0e-44 181.0 157 64.3
CAN.G219.14 Capsicum annuum HOM05D004473 ORTHO05D005652 8.6e-42 174.1 85 98.8
MELO3C027413.2 Cucumis melo HOM05D004473 ORTHO05D005652 1.2e-40 170.2 143 65.7
BolSC49t61206H Brassica oleracea HOM05D004473 ORTHO05D005652 4.7e-40 168.3 120 70.0
Thhalv10028154m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 3.1e-39 165.6 120 67.5
HanXRQChr16g0503951 Helianthus annuus HOM05D004473 ORTHO05D005652 5.2e-39 164.9 160 58.1
Gohir.A04G039120 Gossypium hirsutum HOM05D004473 ORTHO05D005652 2.0e-38 162.9 106 75.5
Hund29405 Selenicereus undatus HOM05D004473 ORTHO05D005652 2.0e-38 162.9 159 59.1
Gohir.1Z050066 Gossypium hirsutum HOM05D004473 ORTHO05D005652 5.4e-36 154.8 161 56.5
CAN.G156.6 Capsicum annuum HOM05D004473 ORTHO05D005652 1.3e-34 150.2 106 73.6
Hund10282 Selenicereus undatus HOM05D004473 ORTHO05D005652 1.3e-34 150.2 156 55.1
arahy.Tifrunner.gnm1.ann1.40BINF Arachis hypogaea HOM05D004473 ORTHO05D005652 5.1e-34 148.3 102 72.5
BraSC25t45889Z Brassica rapa HOM05D004473 ORTHO05D005652 8.6e-34 147.5 119 65.5
Gohir.A08G095662 Gossypium hirsutum HOM05D004473 ORTHO05D005652 9.5e-33 144.1 103 70.9
CAN.G130.4 Capsicum annuum HOM05D004473 ORTHO05D005652 1.9e-28 129.8 74 81.1
Thhalv10001851m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 1.3e-26 123.6 159 45.9
Nn020s41490 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.7e-26 123.2 83 77.1
arahy.Tifrunner.gnm1.ann1.85ZYV6 Arachis hypogaea HOM05D004473 ORTHO05D005652 1.5e-25 120.2 117 58.1
Hund11181 Selenicereus undatus HOM05D004473 ORTHO05D005652 7.3e-25 117.9 86 69.8
Gohir.A04G039150 Gossypium hirsutum HOM05D004473 ORTHO05D005652 3.6e-24 115.5 75 73.3
Thhalv10012215m.g Eutrema salsugineum HOM05D004473 ORTHO05D005652 6.8e-23 111.3 159 42.1
TPR.G10220 Trifolium pratense HOM05D004473 ORTHO05D005652 6.8e-23 111.3 72 72.2
Eucgr.D01147 Eucalyptus grandis HOM05D004473 ORTHO05D005652 4.4e-22 108.6 72 73.6
Gohir.1Z049403 Gossypium hirsutum HOM05D004473 ORTHO05D005652 4.4e-22 108.6 75 69.3
Hund04106 Selenicereus undatus HOM05D004473 ORTHO05D005652 4.4e-22 108.6 156 44.2
HanXRQChr00c0572g0575931 Helianthus annuus HOM05D004473 ORTHO05D005652 3.2e-20 102.4 74 64.9
Nitab4.5_0007979g0030 Nicotiana tabacum HOM05D001387 ORTHO05D001250 8.7e-18 94.4 63 84.1
Lsat_1_v5_gn_2_89740 Lactuca sativa HOM05D004473 ORTHO05D005652 1.1e-17 94.0 61 67.2
Gorai.003G179600 Gossypium raimondii HOM05D004473 ORTHO05D005652 4.3e-17 92.0 65 67.7
Nn8g40470 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.1e-15 87.4 94 57.4
Medtr2g089590 Medicago truncatula HOM05D004473 ORTHO05D005652 2.4e-15 86.3 95 54.7
Gorai.002G165800 Gossypium raimondii HOM05D001387 ORTHO05D001250 5.3e-15 85.1 68 60.3
Oeu062869.1 Olea europaea HOM05D004473 ORTHO05D005652 2.0e-14 83.2 59 72.9
Duzib147G0859 Durio zibethinus HOM05D004473 ORTHO05D005696 2.9e-13 79.3 48 72.9
GSVIVG01020677001 Vitis vinifera HOM05D004473 ORTHO05D005652 5.4e-12 75.1 53 62.3
SGA_v2.0_scaffold479G52250 Striga asiatica HOM05D004473 ORTHO05D005652 7.1e-12 74.7 44 81.8
Migut.D01003 Erythranthe guttata HOM05D004473 ORTHO05D005652 1.2e-11 73.9 68 60.3
Gorai.005G171000 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.1e-11 73.2 47 72.3
SMO086G0023 Selaginella moellendorffii HOM05D004473 ORTHO05D005652 6.0e-11 71.6 158 36.1
AUR62037881 Chenopodium quinoa HOM05D001387 ORTHO05D001250 8.7e-10 67.8 42 71.4
Oeu020582.1 Olea europaea HOM05D004473 ORTHO05D005652 1.9e-09 66.6 46 67.4
TPR.G40775 Trifolium pratense HOM05D004473 ORTHO05D005652 2.5e-09 66.2 45 71.1
GSVIVG01022429001 Vitis vinifera HOM05D004473 ORTHO05D005652 9.6e-09 64.3 41 70.7
GSVIVG01001302001 Vitis vinifera HOM05D004473 ORTHO05D005652 1.6e-08 63.5 52 67.3
TPR.G40774 Trifolium pratense HOM05D004473 ORTHO05D005652 1.4e-07 60.5 42 78.6
BraSC151t45687Z Brassica rapa HOM05D004473 ORTHO05D005652 1.2e-06 57.4 42 66.7
Nn2g10392 Nelumbo nucifera HOM05D004473 ORTHO05D005652 1.2e-06 57.4 39 71.8
Gorai.001G044100 Gossypium raimondii HOM05D004473 ORTHO05D005652 2.6e-06 56.2 51 58.8
Mapoly1406s0001 Marchantia polymorpha HOM05D004473 ORTHO05D005652 9.9e-06 54.3 62 40.3


User provided reference genes

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