Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G85.17 Capsicum annuum HOM05D003666 ORTHO05D004770 9.5e-40 166.4 84 100.0
Lj2A1228G69 Lonicera japonica HOM05D003666 ORTHO05D004770 1.1e-35 152.9 84 92.9
Solyc00g013180.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 1.1e-35 152.9 84 92.9
Sopen11g018270 Solanum pennellii HOM05D003666 ORTHO05D004770 1.1e-35 152.9 84 92.9
Peaxi162Scf01767g00002 Petunia axillaris HOM05D003666 ORTHO05D004770 1.4e-35 152.5 83 92.8
Solyc00g500187.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.0e-34 148.7 81 92.6
Solyc00g500251.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.0e-34 148.7 81 92.6
AL3G44310 Arabidopsis lyrata HOM05D003666 ORTHO05D004770 2.7e-34 148.3 84 90.5
Hma1.2p1_0257F.1_g103600 Hydrangea macrophylla HOM05D003666 ORTHO05D004770 2.7e-34 148.3 83 90.4
CAN.G65.28 Capsicum annuum HOM05D003666 ORTHO05D004770 3.5e-34 147.9 84 90.5
Nn1g09940 Nelumbo nucifera HOM05D003666 ORTHO05D004770 3.5e-34 147.9 84 90.5
Ah.10g028210 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.8e-34 146.7 84 89.3
Ah.10g028760 Amaranthus hybridus HOM05D003666 ORTHO05D004770 7.8e-34 146.7 84 89.3
AUR62042334 Chenopodium quinoa HOM05D003666 ORTHO05D004770 7.8e-34 146.7 84 89.3
Lalb_Chr00c24g0407361 Lupinus albus HOM05D003666 ORTHO05D004770 1.0e-33 146.4 84 89.3
Lalb_Chr01g0010981 Lupinus albus HOM05D003666 ORTHO05D004770 1.0e-33 146.4 84 89.3
RcHm_v2.0_MTg0498651 Rosa chinensis HOM05D003666 ORTHO05D004770 1.7e-33 145.6 82 90.2
Sp3g25750 Schrenkiella parvula HOM05D003666 ORTHO05D004770 1.7e-33 145.6 84 89.3
unitig_87.g28023 Utricularia gibba HOM05D003666 ORTHO05D004770 1.7e-33 145.6 81 90.1
CAN.G1.7 Capsicum annuum HOM05D003666 ORTHO05D004770 3.9e-33 144.4 84 85.7
DCAR_032432 Daucus carota HOM05D003666 ORTHO05D004770 8.6e-33 143.3 77 93.5
Aa31csc553G50 Aethionema arabicum HOM05D003666 ORTHO05D004770 1.1e-32 142.9 82 89.0
Medtr0082s0060 Medicago truncatula HOM05D003666 ORTHO05D004770 1.1e-32 142.9 83 88.0
Peaxi162Scf00530g00005 Petunia axillaris HOM05D003666 ORTHO05D004770 1.1e-32 142.9 81 90.1
arahy.Tifrunner.gnm1.ann1.DQZY30 Arachis hypogaea HOM05D003666 ORTHO05D004770 4.3e-32 141.0 82 87.8
arahy.Tifrunner.gnm1.ann1.G61VPX Arachis hypogaea HOM05D003666 ORTHO05D004770 4.3e-32 141.0 82 87.8
LjContig00439g0017912 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-32 140.6 82 87.8
LjContig00439g0019818 Lotus japonicus HOM05D003666 ORTHO05D004770 5.6e-32 140.6 82 87.8
PSO210G0035 Papaver somniferum HOM05D003666 ORTHO05D004770 5.6e-32 140.6 77 92.2
CAN.G1001.36 Capsicum annuum HOM05D003666 ORTHO05D004770 1.2e-31 139.4 84 84.5
ATMG00580 Arabidopsis thaliana HOM05D003666 ORTHO05D004770 2.1e-31 138.7 77 90.9
Nn1g10170 Nelumbo nucifera HOM05D003666 ORTHO05D004770 2.8e-31 138.3 77 90.9
Sed0020058 Sechium edule HOM05D003666 ORTHO05D004770 2.8e-31 138.3 81 86.4
Lalb_Chr06g0172221 Lupinus albus HOM05D003666 ORTHO05D004770 4.7e-31 137.5 84 84.5
SEGI_24024 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 4.7e-31 137.5 82 84.1
SEGI_34311 Sequoiadendron giganteum HOM05D003666 ORTHO05D004770 4.7e-31 137.5 82 84.1
Potri.007G061921 Populus trichocarpa HOM05D003666 ORTHO05D004770 1.1e-30 136.3 77 89.6
Nitab4.5_0000172g0090 Nicotiana tabacum HOM05D003666 ORTHO05D004770 3.1e-30 134.8 81 86.4
BraSC177t45766Z Brassica rapa HOM05D003666 ORTHO05D004770 4.0e-30 134.4 74 91.9
BraSC77t46648Z Brassica rapa HOM05D003666 ORTHO05D004770 4.0e-30 134.4 74 91.9
Nitab4.5_0006085g0010 Nicotiana tabacum HOM05D003666 ORTHO05D004770 4.0e-30 134.4 81 84.0
HanXRQMTg0579201 Helianthus annuus HOM05D003666 ORTHO05D004770 8.9e-30 133.3 77 88.3
Lsat_1_v5_gn_4_39621 Lactuca sativa HOM05D003666 ORTHO05D004770 8.9e-30 133.3 77 88.3
HanXRQChr02g0045121 Helianthus annuus HOM05D003666 ORTHO05D004770 4.4e-29 131.0 77 87.0
Lalb_Chr06g0172341 Lupinus albus HOM05D003666 ORTHO05D004770 7.5e-29 130.2 80 82.5
Gohir.D09G016300 Gossypium hirsutum HOM05D003666 ORTHO05D004770 3.7e-28 127.9 74 87.8
Psat4g185400 Pisum sativum HOM05D003666 ORTHO05D004770 6.4e-28 127.1 83 77.1
SHI21047 Sapria himalayana HOM05D003666 ORTHO05D004770 1.5e-24 115.9 84 75.0
CSS0015485 Camellia sinensis var. sinensis HOM05D003666 ORTHO05D004770 4.3e-24 114.4 71 81.7
Nitab4.5_0000172g1740 Nicotiana tabacum HOM05D003666 ORTHO05D004770 9.9e-21 103.2 63 79.4
Gohir.A12G076865 Gossypium hirsutum HOM05D003666 ORTHO05D004770 1.4e-19 99.4 58 87.9
SHI12194 Sapria himalayana HOM05D003666 ORTHO05D004770 9.2e-19 96.7 63 77.8
Lsat_1_v5_gn_3_108200 Lactuca sativa HOM05D003666 ORTHO05D004770 3.9e-17 91.3 52 90.4
Nitab4.5_0001788g0230 Nicotiana tabacum HOM05D003666 ORTHO05D004770 2.5e-16 88.6 49 93.9
Thhalv10015949m.g Eutrema salsugineum HOM05D003666 ORTHO05D004770 1.4e-14 82.8 47 91.5
Solyc10g062000.1 Solanum lycopersicum HOM05D003666 ORTHO05D004770 2.0e-13 79.0 53 73.6
SHI36045 Sapria himalayana HOM05D003666 ORTHO05D004770 1.1e-11 73.2 38 86.8
Haze_26858 Corylus avellana HOM05D000729 ORTHO05D001063 1.3e-09 66.2 74 45.9
Sed0023789 Sechium edule HOM05D003666 ORTHO05D004770 1.7e-09 65.9 41 87.8
arahy.Tifrunner.gnm1.ann1.A5I0RB Arachis hypogaea HOM05D003666 ORTHO05D004770 8.7e-09 63.5 38 86.8
SMO053G0008 Selaginella moellendorffii HOM05D003666 ORTHO05D004770 1.8e-06 55.8 81 44.4
TPR.G18511 Trifolium pratense HOM05D003666 ORTHO05D004770 5.2e-06 54.3 35 80.0


User provided reference genes

Program Settings