Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G849.11 Capsicum annuum HOM05D002661 ORTHO05D002786 4.6e-140 501.1 240 100.0
Peaxi162Scf00083g00420 Petunia axillaris HOM05D002661 ORTHO05D002786 5.9e-18 95.5 101 59.4
Peaxi162Scf00083g00513 Petunia axillaris HOM05D002661 ORTHO05D002786 5.9e-18 95.5 101 59.4
PGSC0003DMG400003639 Solanum tuberosum HOM05D002661 ORTHO05D002786 2.2e-17 93.6 104 52.9
Sopen02g028700 Solanum pennellii HOM05D002661 ORTHO05D002786 5.0e-17 92.4 63 77.8
Nitab4.5_0003271g0010 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.5e-16 90.1 102 57.8
CAN.G1671.11 Capsicum annuum HOM05D002661 ORTHO05D002786 3.6e-15 86.3 76 61.8
Nitab4.5_0006286g0080 Nicotiana tabacum HOM05D002661 ORTHO05D002786 5.1e-14 82.4 102 54.9
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 3.7e-12 76.3 101 50.5
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 3.7e-12 76.3 101 49.5
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 8.2e-12 75.1 101 49.5
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 1.1e-11 74.7 63 60.3
CAN.G1735.2 Capsicum annuum HOM05D002661 ORTHO05D002786 1.4e-11 74.3 81 54.3
Nitab4.5_0006119g0020 Nicotiana tabacum HOM05D002661 ORTHO05D002786 6.9e-11 72.0 78 55.1
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 9.1e-11 71.6 62 59.7
CAN.G683.8 Capsicum annuum HOM05D000156 ORTHO05D115089 2.0e-10 70.5 63 52.4
Hma1.2p1_0956F.1_g241350 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 4.5e-10 69.3 55 58.2
Hma1.2p1_0956F.1_g241360 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 4.5e-10 69.3 55 58.2
Hma1.2p1_2239F.1_g317813 Hydrangea macrophylla HOM05D002661 ORTHO05D002786 4.5e-10 69.3 55 58.2
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 1.0e-09 68.2 74 47.3
SalBow3G1681 Salvia bowleyana HOM05D002661 ORTHO05D002786 1.0e-09 68.2 63 58.7
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 2.2e-09 67.0 57 61.4
Haze_03766 Corylus avellana HOM05D002661 ORTHO05D002786 2.2e-09 67.0 54 57.4
Nitab4.5_0000438g0050 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.2e-09 67.0 65 61.5
GSVIVG01018786001 Vitis vinifera HOM05D002668 ORTHO05D003295 2.2e-09 67.0 55 60.0
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 2.9e-09 66.6 54 55.6
Nn5g30157 Nelumbo nucifera HOM05D002661 ORTHO05D002786 2.9e-09 66.6 69 49.3
CAN.G1105.4 Capsicum annuum HOM05D001769 ORTHO05D001695 5.0e-09 65.9 52 53.8
EL10Ac6g15477 Beta vulgaris HOM05D002661 ORTHO05D002786 6.5e-09 65.5 58 56.9
MBI05_g15357_MAGBIO Magnolia biondii HOM05D002661 ORTHO05D002786 6.5e-09 65.5 68 55.9
PSO675G6292 Papaver somniferum HOM05D002661 ORTHO05D002786 8.5e-09 65.1 74 52.7
Thecc.01G019200 Theobroma cacao HOM05D002661 ORTHO05D002786 1.1e-08 64.7 64 53.1
Sabra05G0184300 Salix brachista HOM05D002661 ORTHO05D002786 1.4e-08 64.3 53 60.4
AUR62029460 Chenopodium quinoa HOM05D002661 ORTHO05D002786 2.5e-08 63.5 47 61.7
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 2.5e-08 63.5 104 44.2
AUR62003372 Chenopodium quinoa HOM05D002661 ORTHO05D002786 4.2e-08 62.8 55 52.7
Peaxi162Scf00260g00420 Petunia axillaris HOM05D000549 ORTHO05D006202 5.5e-08 62.4 71 52.1
QL12p009265 Quercus lobata HOM05D000549 ORTHO05D006202 5.5e-08 62.4 68 52.9
QL12p009692 Quercus lobata HOM05D000549 ORTHO05D006202 5.5e-08 62.4 68 52.9
Manes.02G104300 Manihot esculenta HOM05D002661 ORTHO05D002786 7.2e-08 62.0 68 47.1
CANSAT01G1513 Cannabis sativa HOM05D002661 ORTHO05D002786 9.4e-08 61.6 54 51.9
Nitab4.5_0006805g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 9.4e-08 61.6 70 52.9
TWI73G0139 Tripterygium wilfordii HOM05D002661 ORTHO05D002786 9.4e-08 61.6 69 46.4
MSTRG.23411 Avicennia marina HOM05D002661 ORTHO05D002786 1.2e-07 61.2 71 47.9
COL.COLO4_21913 Corchorus olitorius HOM05D002661 ORTHO05D002786 1.6e-07 60.8 82 42.7
Potri.005G238500 Populus trichocarpa HOM05D002661 ORTHO05D002786 1.6e-07 60.8 53 58.5
Solyc02g083920.1 Solanum lycopersicum HOM05D002661 ORTHO05D002786 1.6e-07 60.8 38 78.9
CSS0011014 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 2.1e-07 60.5 68 52.9
CSS0022595 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 2.1e-07 60.5 68 52.9
Haze_07961 Corylus avellana HOM05D000549 ORTHO05D006202 2.1e-07 60.5 68 50.0
Gohir.D12G216600 Gossypium hirsutum HOM05D000549 ORTHO05D006202 2.1e-07 60.5 83 42.2
Lsat_1_v5_gn_4_146600 Lactuca sativa HOM05D002661 ORTHO05D002786 2.1e-07 60.5 68 51.5
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 2.1e-07 60.5 80 48.8
GSVIVG01004793001 Vitis vinifera HOM05D000549 ORTHO05D006202 2.7e-07 60.1 68 52.9
Gorai.008G232200 Gossypium raimondii HOM05D000549 ORTHO05D006202 3.6e-07 59.7 83 42.2
Thecc.03G244600 Theobroma cacao HOM05D000549 ORTHO05D006202 3.6e-07 59.7 78 44.9
arahy.Tifrunner.gnm1.ann1.T25A5J Arachis hypogaea HOM05D002661 ORTHO05D002786 4.7e-07 59.3 60 50.0
CSS0002790 Camellia sinensis var. sinensis HOM05D000549 ORTHO05D006202 4.7e-07 59.3 68 50.0
Gohir.A12G214000 Gossypium hirsutum HOM05D000549 ORTHO05D006202 4.7e-07 59.3 83 42.2
Gorai.008G232000 Gossypium raimondii HOM05D000549 ORTHO05D006202 6.1e-07 58.9 73 43.8
Potri.002G023000 Populus trichocarpa HOM05D002661 ORTHO05D002786 6.1e-07 58.9 53 56.6
Actinidia31505 Actinidia chinensis HOM05D007047 ORTHO05D006202 8.0e-07 58.5 68 50.0
MELO3C003756.2 Cucumis melo HOM05D002661 ORTHO05D002786 8.0e-07 58.5 54 55.6
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 8.0e-07 58.5 54 50.0
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 8.0e-07 58.5 55 54.5
arahy.Tifrunner.gnm1.ann1.TT5BBF Arachis hypogaea HOM05D002661 ORTHO05D002786 1.0e-06 58.2 60 48.3
Cpa.g.sc6.246 Carica papaya HOM05D002661 ORTHO05D002786 1.0e-06 58.2 65 46.2
Nitab4.5_0009301g0030 Nicotiana tabacum HOM05D000549 ORTHO05D006202 1.0e-06 58.2 70 50.0
MD04G1057400 Malus domestica HOM05D000549 ORTHO05D006202 1.4e-06 57.8 55 54.5
Prupe.1G366100 Prunus persica HOM05D002661 ORTHO05D002786 1.4e-06 57.8 57 50.9
Actinidia16982 Actinidia chinensis HOM05D002661 ORTHO05D002786 1.8e-06 57.4 73 47.9
Aqoxy3G02723 Aquilegia oxysepala HOM05D000549 ORTHO05D006202 1.8e-06 57.4 68 51.5
Dinv39189 Davidia involucrata HOM05D000549 ORTHO05D006202 1.8e-06 57.4 58 55.2
Lj4A218T51 Lonicera japonica HOM05D002661 ORTHO05D002786 1.8e-06 57.4 49 57.1
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 1.8e-06 57.4 48 60.4
Phvul.009G016600 Phaseolus vulgaris HOM05D002661 ORTHO05D002786 1.8e-06 57.4 68 47.1
TWI23G0592 Tripterygium wilfordii HOM05D000549 ORTHO05D006202 1.8e-06 57.4 68 50.0
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 2.3e-06 57.0 63 47.6
Nn6g33826 Nelumbo nucifera HOM05D000549 ORTHO05D006202 2.3e-06 57.0 78 44.9
Sed0015402 Sechium edule HOM05D002661 ORTHO05D002786 2.3e-06 57.0 69 49.3
Solyc08g078130.4 Solanum lycopersicum HOM05D000549 ORTHO05D006202 2.3e-06 57.0 67 52.2
ClCG05G018310 Citrullus lanatus HOM05D002661 ORTHO05D002786 3.0e-06 56.6 54 55.6
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 3.0e-06 56.6 48 60.4
Duzib205G0373 Durio zibethinus HOM05D000549 ORTHO05D006202 3.0e-06 56.6 78 43.6
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 3.0e-06 56.6 71 45.1
HPP92_002098 Vanilla planifolia HOM05D000549 ORTHO05D006202 3.0e-06 56.6 64 53.1
CiPaw.12G048500 Carya illinoinensis HOM05D000549 ORTHO05D006202 3.9e-06 56.2 107 36.4
Hma1.2p1_0821F.1_g224190 Hydrangea macrophylla HOM05D000549 ORTHO05D006202 3.9e-06 56.2 58 55.2
MELO3C013913.2 Cucumis melo HOM05D000549 ORTHO05D006202 5.2e-06 55.8 63 50.8
Duzib068G1439 Durio zibethinus HOM05D000549 ORTHO05D006202 5.2e-06 55.8 58 53.4
Nitab4.5_0010507g0010 Nicotiana tabacum HOM05D002661 ORTHO05D002786 5.2e-06 55.8 51 54.9
Duzib041G0251 Durio zibethinus HOM05D002661 ORTHO05D002786 6.7e-06 55.5 53 52.8
Lj2C226T17 Lonicera japonica HOM05D000549 ORTHO05D006202 6.7e-06 55.5 68 50.0
MD08G1013500 Malus domestica HOM05D002661 ORTHO05D002786 6.7e-06 55.5 75 41.3
Prupe.5G061300 Prunus persica HOM05D000549 ORTHO05D006202 6.7e-06 55.5 63 49.2
Rhsim04G0179900 Rhododendron simsii HOM05D000549 ORTHO05D006202 6.7e-06 55.5 68 48.5
TPR.G10468 Trifolium pratense HOM05D000549 ORTHO05D006202 6.7e-06 55.5 58 51.7
Ca_21986_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 8.8e-06 55.1 58 53.4
Ca_21999_v3 Cicer arietinum L. HOM05D000549 ORTHO05D006202 8.8e-06 55.1 58 53.4
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 8.8e-06 55.1 70 42.9
ECA240G4209 Erigeron canadensis HOM05D000549 ORTHO05D006202 8.8e-06 55.1 66 48.5
Migut.C00200 Erythranthe guttata HOM05D000549 ORTHO05D006202 8.8e-06 55.1 68 48.5
Medtr4g100350 Medicago truncatula HOM05D000549 ORTHO05D006202 8.8e-06 55.1 58 53.4
PSO063G6040 Papaver somniferum HOM05D000549 ORTHO05D006202 8.8e-06 55.1 68 48.5
PSO782G4788 Papaver somniferum HOM05D000549 ORTHO05D006202 8.8e-06 55.1 68 48.5
PGSC0003DMG400026228 Solanum tuberosum HOM05D000549 ORTHO05D006202 8.8e-06 55.1 47 63.8


User provided reference genes

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