Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G845.22 Capsicum annuum HOM05D004409 ORTHO05D005292 3.6e-61 238.0 118 100.0
Nitab4.5_0000185g0190 Nicotiana tabacum HOM05D004409 ORTHO05D005292 1.4e-44 183.0 108 76.9
Peaxi162Scf00102g00085 Petunia axillaris HOM05D004409 ORTHO05D005292 8.3e-42 173.7 108 75.0
Dinv28881 Davidia involucrata HOM05D004409 ORTHO05D005292 7.3e-38 160.6 107 63.6
TWI60G0543 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.6e-35 152.1 100 69.0
Actinidia31492 Actinidia chinensis HOM05D004409 ORTHO05D005292 7.6e-35 150.6 106 59.4
Atru.chr9.1197 Acer truncatum HOM05D004409 ORTHO05D005292 2.2e-34 149.1 98 62.2
Thecc.03G239100 Theobroma cacao HOM05D004409 ORTHO05D005292 2.9e-34 148.7 98 64.3
Potri.003G084000 Populus trichocarpa HOM05D004409 ORTHO05D005292 4.9e-34 147.9 106 60.4
QL12p008592 Quercus lobata HOM05D004409 ORTHO05D005292 1.9e-33 146.0 106 62.3
Duzib205G0528 Durio zibethinus HOM05D004409 ORTHO05D005292 2.4e-33 145.6 101 60.4
GSVIVG01004835001 Vitis vinifera HOM05D004409 ORTHO05D005292 3.2e-33 145.2 107 62.6
Actinidia10866 Actinidia chinensis HOM05D004409 ORTHO05D005292 5.4e-33 144.4 109 59.6
COL.COLO4_06685 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.2e-33 143.7 102 59.8
Hma1.2p1_3159F.1_g333389 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.2e-32 143.3 98 60.2
CSS0044628 Camellia sinensis var. sinensis HOM05D004409 ORTHO05D005292 2.7e-32 142.1 82 72.0
Duzib068G0789 Durio zibethinus HOM05D004409 ORTHO05D005292 2.7e-32 142.1 100 60.0
Sabra03G0054600 Salix brachista HOM05D004409 ORTHO05D005292 7.8e-32 140.6 106 58.5
Manes.01G089900 Manihot esculenta HOM05D004409 ORTHO05D005292 1.0e-31 140.2 103 62.1
Ciclev10022946m.g Citrus clementina HOM05D004409 ORTHO05D005292 3.0e-31 138.7 101 60.4
Cfa012334 Carpinus fangiana HOM05D004409 ORTHO05D005292 6.6e-31 137.5 100 63.0
Duzib068G1042 Durio zibethinus HOM05D004409 ORTHO05D005292 6.6e-31 137.5 100 57.0
Gohir.D12G214900 Gossypium hirsutum HOM05D004409 ORTHO05D005292 8.6e-31 137.1 100 57.0
Gorai.008G230500 Gossypium raimondii HOM05D004409 ORTHO05D005292 1.1e-30 136.7 100 56.0
Gohir.A12G212400 Gossypium hirsutum HOM05D004409 ORTHO05D005292 1.5e-30 136.3 100 55.0
Aqoxy3G02644 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 7.3e-30 134.0 101 54.5
Cc08_g11210 Coffea canephora HOM05D004409 ORTHO05D005292 9.6e-30 133.7 95 62.1
THA.LOC104809923 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.6e-29 132.9 98 58.2
TAR636G0884 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.6e-29 132.9 107 52.3
Cfa012333 Carpinus fangiana HOM05D004409 ORTHO05D005292 6.2e-29 131.0 108 57.4
DCAR_008327 Daucus carota HOM05D004409 ORTHO05D005292 6.2e-29 131.0 78 69.2
ECA240G1407 Erigeron canadensis HOM05D004409 ORTHO05D005292 8.1e-29 130.6 81 66.7
CANSAT21G0033 Cannabis sativa HOM05D004409 ORTHO05D005292 2.4e-28 129.0 101 54.5
Thecc.03G144800 Theobroma cacao HOM05D004409 ORTHO05D005292 3.1e-28 128.6 108 51.9
GSVIVG01004822001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.2e-28 127.9 94 54.3
GSVIVG01004827001 Vitis vinifera HOM05D004409 ORTHO05D005292 5.2e-28 127.9 94 54.3
GSVIVG01004832001 Vitis vinifera HOM05D004409 ORTHO05D005292 6.9e-28 127.5 82 64.6
CANSAT21G0737 Cannabis sativa HOM05D004409 ORTHO05D005292 1.2e-27 126.7 101 51.5
HanXRQChr13g0419061 Helianthus annuus HOM05D004409 ORTHO05D005292 1.5e-27 126.3 104 51.9
HanXRQChr03g0089681 Helianthus annuus HOM05D004409 ORTHO05D005292 2.0e-27 125.9 104 51.9
Ciclev10030379m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.6e-27 125.6 78 65.4
COL.COLO4_37301 Corchorus olitorius HOM05D004409 ORTHO05D005292 9.9e-27 123.6 108 50.9
CAN.G572.17 Capsicum annuum HOM05D004409 ORTHO05D005292 1.7e-26 122.9 106 51.9
Thecc.03G144900 Theobroma cacao HOM05D004409 ORTHO05D005292 1.7e-26 122.9 108 49.1
PGSC0003DMG400026212 Solanum tuberosum HOM05D004409 ORTHO05D005292 6.4e-26 120.9 104 51.9
Thecc.03G144700 Theobroma cacao HOM05D004409 ORTHO05D005292 8.4e-26 120.6 100 52.0
Ciclev10022894m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.4e-25 119.8 108 51.9
Prupe.5G054600 Prunus persica HOM05D004409 ORTHO05D005292 3.2e-25 118.6 105 52.4
Peaxi162Scf00391g00715 Petunia axillaris HOM05D004409 ORTHO05D005292 7.1e-25 117.5 108 52.8
Hma1.2p1_1014F.1_g247850 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.2e-24 116.7 103 49.5
Atru.chr6.1971 Acer truncatum HOM05D004409 ORTHO05D005292 2.7e-24 115.5 100 53.0
Haze_08359 Corylus avellana HOM05D004409 ORTHO05D005292 3.5e-24 115.2 93 54.8
Thecc.08G189000 Theobroma cacao HOM05D004409 ORTHO05D005292 3.5e-24 115.2 114 46.5
Gohir.D13G124300 Gossypium hirsutum HOM05D004409 ORTHO05D005292 4.6e-24 114.8 80 57.5
Atru.chr9.1196 Acer truncatum HOM05D004409 ORTHO05D005292 7.8e-24 114.0 82 54.9
Aqoxy6G00065 Aquilegia oxysepala HOM05D004409 ORTHO05D005292 1.0e-23 113.6 100 51.0
Lsat_1_v5_gn_6_94501 Lactuca sativa HOM05D004409 ORTHO05D005292 1.0e-23 113.6 104 47.1
Duzib205G0410 Durio zibethinus HOM05D004409 ORTHO05D005292 1.3e-23 113.2 108 48.1
Dinv28880 Davidia involucrata HOM05D001887 ORTHO05D003756 1.7e-23 112.8 109 47.7
Actinidia01026 Actinidia chinensis HOM05D004409 ORTHO05D005292 2.3e-23 112.5 97 47.4
ATR1136G026 Amborella trichopoda HOM05D004409 ORTHO05D005292 3.9e-23 111.7 78 64.1
DCAR_005587 Daucus carota HOM05D004409 ORTHO05D005292 3.9e-23 111.7 100 50.0
Dinv34530 Davidia involucrata HOM05D004409 ORTHO05D005292 3.9e-23 111.7 96 47.9
ECA240G4009 Erigeron canadensis HOM05D004409 ORTHO05D005292 5.1e-23 111.3 84 54.8
Thecc.07G180600 Theobroma cacao HOM05D004409 ORTHO05D005292 5.1e-23 111.3 110 45.5
COL.COLO4_21695 Corchorus olitorius HOM05D004409 ORTHO05D005292 8.7e-23 110.5 77 59.7
Dinv25140 Davidia involucrata HOM05D004409 ORTHO05D005292 8.7e-23 110.5 80 56.2
HanXRQChr13g0419051 Helianthus annuus HOM05D004409 ORTHO05D005292 1.1e-22 110.2 104 45.2
TAR375G0484 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.1e-22 110.2 108 44.4
TAR375G0498 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.5e-22 109.8 103 51.5
GSVIVG01004836001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.5e-22 109.8 104 44.2
COL.COLO4_37302 Corchorus olitorius HOM05D004409 ORTHO05D005292 2.5e-22 109.0 104 42.3
DCAR_003519 Daucus carota HOM05D004409 ORTHO05D005292 2.5e-22 109.0 78 57.7
ECA240G0589 Erigeron canadensis HOM05D004409 ORTHO05D005292 2.5e-22 109.0 104 45.2
TWI39G0462 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 2.5e-22 109.0 98 48.0
GSVIVG01013815001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.5e-22 109.0 110 43.6
Eucgr.K00114 Eucalyptus grandis HOM05D004409 ORTHO05D005292 4.3e-22 108.2 84 51.2
PGR142G3629 Punica granatum HOM05D004409 ORTHO05D005292 4.3e-22 108.2 104 47.1
Oeu019420.1 Olea europaea HOM05D004409 ORTHO05D005292 5.6e-22 107.8 101 45.5
Hund27103 Selenicereus undatus HOM05D004409 ORTHO05D005292 5.6e-22 107.8 100 48.0
TWI39G0193 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.6e-22 107.8 98 49.0
TWI39G0310 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 5.6e-22 107.8 98 48.0
TAR375G0026 Trochodendron aralioides HOM05D004409 ORTHO05D005292 5.6e-22 107.8 109 48.6
PGR042G3450 Punica granatum HOM05D004409 ORTHO05D005292 7.3e-22 107.5 108 44.4
GSVIVG01013894001 Vitis vinifera HOM05D004409 ORTHO05D005292 7.3e-22 107.5 85 54.1
HanXRQChr03g0089691 Helianthus annuus HOM05D004409 ORTHO05D005292 9.6e-22 107.1 99 49.5
Ciclev10033339m.g Citrus clementina HOM05D004409 ORTHO05D005292 1.3e-21 106.7 77 58.4
FAN10G3781 Fragaria x ananassa HOM05D004409 ORTHO05D005292 1.3e-21 106.7 99 48.5
Hma1.2p1_1014F.1_g247830 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 1.3e-21 106.7 102 45.1
EL10Ac1g00121 Beta vulgaris HOM05D004409 ORTHO05D005292 1.6e-21 106.3 108 47.2
CsaV3_3G004710 Cucumis sativus L. HOM05D004409 ORTHO05D005292 1.6e-21 106.3 108 43.5
GSVIVG01004838001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.6e-21 106.3 79 53.2
GSVIVG01024506001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.6e-21 106.3 88 52.3
ATR1136G211 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.1e-21 105.9 107 50.5
GSVIVG01013816001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.1e-21 105.9 85 54.1
ATR1136G215 Amborella trichopoda HOM05D004409 ORTHO05D005292 2.8e-21 105.5 109 45.9
MELO3C014170.2 Cucumis melo HOM05D004409 ORTHO05D005292 2.8e-21 105.5 108 46.3
Cc06_g12260 Coffea canephora HOM05D004409 ORTHO05D005292 3.6e-21 105.1 104 44.2
Hma1.2p1_1014F.1_g247840 Hydrangea macrophylla HOM05D004409 ORTHO05D005292 3.6e-21 105.1 103 45.6
FvH4_7g26400 Fragaria vesca HOM05D004409 ORTHO05D005292 4.8e-21 104.8 98 50.0
TAR375G0880 Trochodendron aralioides HOM05D004409 ORTHO05D005292 4.8e-21 104.8 105 47.6
CANSAT56G2887 Cannabis sativa HOM05D004409 ORTHO05D005292 6.2e-21 104.4 104 45.2
RcHm_v2.0_Chr1g0372991 Rosa chinensis HOM05D004409 ORTHO05D005292 1.1e-20 103.6 102 44.1
GSVIVG01024502001 Vitis vinifera HOM05D004409 ORTHO05D005292 1.1e-20 103.6 101 45.5
COL.COLO4_32251 Corchorus olitorius HOM05D004409 ORTHO05D005292 1.4e-20 103.2 109 44.0
ClCG10G002150 Citrullus lanatus HOM05D004409 ORTHO05D005292 1.8e-20 102.8 104 40.4
Sed0027041 Sechium edule HOM05D004409 ORTHO05D005292 1.8e-20 102.8 78 52.6
RcHm_v2.0_Chr1g0328141 Rosa chinensis HOM05D004409 ORTHO05D005292 2.4e-20 102.4 102 43.1
GSVIVG01013825001 Vitis vinifera HOM05D004409 ORTHO05D005292 2.4e-20 102.4 101 46.5
CANSAT56G2756 Cannabis sativa HOM05D004409 ORTHO05D005292 5.3e-20 101.3 108 43.5
Lsat_1_v5_gn_6_94401 Lactuca sativa HOM05D004409 ORTHO05D005292 9.0e-20 100.5 98 43.9
RcHm_v2.0_Chr1g0328171 Rosa chinensis HOM05D004409 ORTHO05D005292 9.0e-20 100.5 102 44.1
RcHm_v2.0_Chr1g0372951 Rosa chinensis HOM05D004409 ORTHO05D005292 9.0e-20 100.5 101 48.5
TWI39G0819 Tripterygium wilfordii HOM05D004409 ORTHO05D005292 9.0e-20 100.5 104 45.2
Cpa.g.sc13.213 Carica papaya HOM05D004409 ORTHO05D005292 1.2e-19 100.1 101 46.5
CsaV3_3G002240 Cucumis sativus L. HOM05D004409 ORTHO05D005292 1.2e-19 100.1 104 39.4
FAN06G5092 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.0e-19 99.4 103 42.7
Oeu006074.1 Olea europaea HOM05D004409 ORTHO05D005292 2.0e-19 99.4 104 44.2
FAN03G2468 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.6e-19 99.0 80 50.0
FvH4_7g26430 Fragaria vesca HOM05D004409 ORTHO05D005292 5.8e-19 97.8 98 43.9
FAN10G4140 Fragaria x ananassa HOM05D004409 ORTHO05D005292 5.8e-19 97.8 102 44.1
Actinidia25914 Actinidia chinensis HOM05D004409 ORTHO05D005292 1.3e-18 96.7 104 44.2
MELO3C013895.2 Cucumis melo HOM05D004409 ORTHO05D005292 1.3e-18 96.7 104 42.3
Ciclev10033338m.g Citrus clementina HOM05D004409 ORTHO05D005292 2.2e-18 95.9 107 43.0
MD07G1239500 Malus domestica HOM05D004409 ORTHO05D005292 2.9e-18 95.5 85 44.7
FAN01G0604 Fragaria x ananassa HOM05D004409 ORTHO05D005292 8.4e-18 94.0 80 48.8
THA.LOC104816486 Tarenaya hassleriana HOM05D004409 ORTHO05D005292 1.1e-17 93.6 96 41.7
Aa31LG9G14800 Aethionema arabicum HOM05D004409 ORTHO05D005292 1.4e-17 93.2 101 40.6
Migut.J00932 Erythranthe guttata HOM05D004409 ORTHO05D005292 1.4e-17 93.2 98 44.9
CANSAT56G0658 Cannabis sativa HOM05D004409 ORTHO05D005292 2.4e-17 92.4 103 37.9
CANSAT56G4079 Cannabis sativa HOM05D004409 ORTHO05D005292 2.4e-17 92.4 103 37.9
FAN17G1151 Fragaria x ananassa HOM05D004409 ORTHO05D005292 2.4e-17 92.4 81 48.1
Prupe.7G057100 Prunus persica HOM05D004409 ORTHO05D005292 3.2e-17 92.0 107 42.1
SGA_v2.0_scaffold91G28102 Striga asiatica HOM05D004409 ORTHO05D005292 7.1e-17 90.9 103 41.7
HanXRQChr13g0418291 Helianthus annuus HOM05D004409 ORTHO05D005292 2.1e-16 89.4 102 40.2
Oeu056339.1 Olea europaea HOM05D004409 ORTHO05D005292 2.7e-16 89.0 103 39.8
Migut.H01906 Erythranthe guttata HOM05D004409 ORTHO05D005292 7.9e-16 87.4 104 41.3
MD07G1239700 Malus domestica HOM05D004409 ORTHO05D005292 1.0e-15 87.0 86 45.3
A03p40420 Brassica napus HOM05D004409 ORTHO05D005292 6.7e-15 84.3 104 40.4
BolC3t17205H Brassica oleracea HOM05D004409 ORTHO05D005292 6.7e-15 84.3 104 40.4
BraA03t13197Z Brassica rapa HOM05D004409 ORTHO05D005292 6.7e-15 84.3 104 40.4
C09p37510 Brassica napus HOM05D004489 ORTHO05D032456 1.1e-14 83.6 106 44.3
BolC9t56581H Brassica oleracea HOM05D004489 ORTHO05D032456 1.1e-14 83.6 106 44.3
MD07G1239800 Malus domestica HOM05D004409 ORTHO05D005292 1.1e-14 83.6 99 42.4
Carub.0006s2782 Capsella rubella HOM05D004409 ORTHO05D005292 1.5e-14 83.2 99 44.4
BcaC01g03728 Brassica carinata HOM05D004409 ORTHO05D005292 2.5e-14 82.4 103 39.8
Migut.H01907 Erythranthe guttata HOM05D004409 ORTHO05D005292 3.3e-14 82.0 102 38.2
ATR0745G048 Amborella trichopoda HOM05D004409 ORTHO05D005292 5.6e-14 81.3 104 40.4
C03p49230 Brassica napus HOM05D004409 ORTHO05D005292 5.6e-14 81.3 103 38.8
CARHR260260 Cardamine hirsuta HOM05D004409 ORTHO05D005292 5.6e-14 81.3 106 43.4
BcaB04g18966 Brassica carinata HOM05D004409 ORTHO05D005292 7.4e-14 80.9 103 39.8
Sp6g08250 Schrenkiella parvula HOM05D004409 ORTHO05D005292 7.4e-14 80.9 96 40.6
MSTRG.27238 Avicennia marina HOM05D004409 ORTHO05D005292 2.1e-13 79.3 106 36.8
BcaC04g20961 Brassica carinata HOM05D004489 ORTHO05D032456 2.8e-13 79.0 104 42.3
Gorai.013G138900 Gossypium raimondii HOM05D004409 ORTHO05D005292 6.2e-13 77.8 61 52.5
CAN.G572.18 Capsicum annuum HOM05D004409 ORTHO05D005292 4.0e-12 75.1 100 33.0
TAR636G0767 Trochodendron aralioides HOM05D004409 ORTHO05D005292 1.5e-11 73.2 66 47.0
BcaB01g02799 Brassica carinata HOM05D004409 ORTHO05D005292 3.4e-11 72.0 99 38.4
Eucgr.K00115 Eucalyptus grandis HOM05D004409 ORTHO05D005292 5.8e-11 71.2 105 40.0
Cfa012335 Carpinus fangiana HOM05D004409 ORTHO05D005292 8.4e-10 67.4 103 34.0
SMO134G0054 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 1.8e-07 59.7 64 39.1
RcHm_v2.0_Chr7g0218541 Rosa chinensis HOM05D002739 ORTHO05D002877 8.7e-07 57.4 112 32.1
SMO111G0095 Selaginella moellendorffii HOM05D004409 ORTHO05D005292 1.9e-06 56.2 113 28.3
THA.LOC104800444 Tarenaya hassleriana HOM05D002739 ORTHO05D002877 2.5e-06 55.8 53 41.5
ATR0721G129 Amborella trichopoda HOM05D002739 ORTHO05D002877 3.3e-06 55.5 54 38.9
MD02G1296300 Malus domestica HOM05D002739 ORTHO05D002877 4.3e-06 55.1 53 43.4
ATR0721G147 Amborella trichopoda HOM05D002739 ORTHO05D002877 5.6e-06 54.7 100 28.0
Nn7g36459 Nelumbo nucifera HOM05D002739 ORTHO05D002877 9.6e-06 53.9 52 40.4


User provided reference genes

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