Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G844.1 Capsicum annuum HOM05D006498 ORTHO05D006377 6.8e-205 717.2 397 100.0
Sopen09g019810 Solanum pennellii HOM05D006498 ORTHO05D006377 5.2e-104 382.1 311 74.0
Nitab4.5_0000038g0230 Nicotiana tabacum HOM05D006498 ORTHO05D006377 1.6e-97 360.5 452 58.4
Nitab4.5_0005686g0030 Nicotiana tabacum HOM05D006498 ORTHO05D006377 3.2e-93 346.3 439 58.8
Peaxi162Scf00235g00219 Petunia axillaris HOM05D006498 ORTHO05D006377 7.5e-87 325.1 358 60.6
Solyc09g055870.2 Solanum lycopersicum HOM05D006498 ORTHO05D006377 6.6e-83 312.0 365 60.3
Hma1.2p1_0491F.1_g164630 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 1.1e-64 251.5 312 56.4
Cc01_g15950 Coffea canephora HOM05D006498 ORTHO05D006377 3.1e-64 250.0 436 47.7
Duzib150G1211 Durio zibethinus HOM05D006498 ORTHO05D006377 6.9e-64 248.8 451 44.3
Ca_21256_v3 Cicer arietinum L. HOM05D006498 ORTHO05D006377 2.6e-63 246.9 416 47.8
VMungo1215G1417 Vigna mungo HOM05D006498 ORTHO05D006377 2.6e-63 246.9 409 46.7
CSS0012471 Camellia sinensis var. sinensis HOM05D006498 ORTHO05D006377 1.7e-62 244.2 452 42.7
Actinidia23350 Actinidia chinensis HOM05D006498 ORTHO05D006377 2.4e-61 240.4 438 45.0
Lsat_1_v5_gn_9_16541 Lactuca sativa HOM05D006498 ORTHO05D006377 3.0e-59 233.4 472 44.7
Manes.14G159400 Manihot esculenta HOM05D006498 ORTHO05D006377 3.0e-59 233.4 414 45.2
Sc18g0007220 Simmondsia chinensis HOM05D006498 ORTHO05D006377 3.0e-59 233.4 324 54.0
SGA_v2.0_scaffold95G28702 Striga asiatica HOM05D006498 ORTHO05D006377 3.9e-59 233.0 466 42.7
arahy.Tifrunner.gnm1.ann1.YNM2K2 Arachis hypogaea HOM05D006498 ORTHO05D006377 8.7e-59 231.9 398 47.7
TWI34G1139 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 1.9e-58 230.7 412 44.2
FAN17G1293 Fragaria x ananassa HOM05D006498 ORTHO05D006377 2.5e-58 230.3 418 45.2
CiPaw.07G197600 Carya illinoinensis HOM05D006498 ORTHO05D006377 1.3e-57 228.0 401 45.1
Phvul.003G140900 Phaseolus vulgaris HOM05D006498 ORTHO05D006377 1.3e-57 228.0 413 46.5
TWI32G0168 Tripterygium wilfordii HOM05D006498 ORTHO05D006377 3.6e-57 226.5 413 44.3
FvH4_4g07150 Fragaria vesca HOM05D006498 ORTHO05D006377 4.8e-57 226.1 433 44.8
Gohir.D13G212600 Gossypium hirsutum HOM05D006498 ORTHO05D006377 4.8e-57 226.1 429 42.7
Gorai.013G243000 Gossypium raimondii HOM05D006498 ORTHO05D006377 4.8e-57 226.1 429 42.7
arahy.Tifrunner.gnm1.ann1.XIUU7W Arachis hypogaea HOM05D006498 ORTHO05D006377 6.2e-57 225.7 435 46.0
Haze_22031 Corylus avellana HOM05D006498 ORTHO05D006377 1.1e-56 224.9 423 42.6
Dinv28799 Davidia involucrata HOM05D006498 ORTHO05D006377 1.8e-56 224.2 352 48.3
Medtr4g127350 Medicago truncatula HOM05D006498 ORTHO05D006377 4.0e-56 223.0 330 48.5
Prupe.1G074500 Prunus persica HOM05D006498 ORTHO05D006377 9.0e-56 221.9 462 44.2
Thecc.09G186800 Theobroma cacao HOM05D006498 ORTHO05D006377 5.8e-55 219.2 423 46.8
Nn4g25125 Nelumbo nucifera HOM05D006498 ORTHO05D006377 7.6e-55 218.8 477 40.9
CANSAT11G0487 Cannabis sativa HOM05D006498 ORTHO05D006377 2.2e-54 217.2 305 50.5
MSTRG.17962 Avicennia marina HOM05D006498 ORTHO05D006377 3.8e-54 216.5 501 41.3
FAN12G3360 Fragaria x ananassa HOM05D006498 ORTHO05D006377 3.8e-54 216.5 433 43.6
SalBow3G4321 Salvia bowleyana HOM05D006498 ORTHO05D006377 4.9e-54 216.1 339 48.1
HanXRQChr07g0190541 Helianthus annuus HOM05D006498 ORTHO05D006377 6.4e-54 215.7 343 49.3
Gohir.A13G208200 Gossypium hirsutum HOM05D006498 ORTHO05D006377 1.4e-53 214.5 351 45.6
Psat0s3389g0200 Pisum sativum HOM05D006498 ORTHO05D006377 2.4e-53 213.8 250 50.8
GSVIVG01029313001 Vitis vinifera HOM05D006498 ORTHO05D006377 2.4e-53 213.8 422 45.0
Lj2A1114T36 Lonicera japonica HOM05D006498 ORTHO05D006377 3.2e-53 213.4 390 43.6
Aqoxy7G02850 Aquilegia oxysepala HOM05D006498 ORTHO05D006377 9.3e-53 211.8 446 43.9
Lj4g0022386 Lotus japonicus HOM05D006498 ORTHO05D006377 2.7e-52 210.3 342 50.9
Eucgr.C00107 Eucalyptus grandis HOM05D006498 ORTHO05D006377 1.3e-51 208.0 309 52.4
Cfa013457 Carpinus fangiana HOM05D006498 ORTHO05D006377 3.0e-51 206.8 426 42.5
MELO3C017425.2 Cucumis melo HOM05D006498 ORTHO05D006377 5.1e-51 206.1 442 42.8
MD13G1239600 Malus domestica HOM05D006498 ORTHO05D006377 1.1e-50 204.9 459 39.2
Atru.chr7.955 Acer truncatum HOM05D006498 ORTHO05D006377 1.9e-50 204.1 427 44.0
Glyma.13G101000 Glycine max HOM05D006498 ORTHO05D006377 1.9e-50 204.1 298 51.0
ClCG06G013640 Citrullus lanatus HOM05D006498 ORTHO05D006377 2.5e-50 203.8 492 39.6
Ciclev10008415m.g Citrus clementina HOM05D006498 ORTHO05D006377 7.4e-50 202.2 446 40.4
Migut.N00676 Erythranthe guttata HOM05D006498 ORTHO05D006377 1.3e-49 201.4 447 39.8
Oeu003665.1 Olea europaea HOM05D006498 ORTHO05D006377 1.3e-49 201.4 355 46.5
Sed0023189 Sechium edule HOM05D006498 ORTHO05D006377 1.4e-48 198.0 430 42.8
THA.LOC104820009 Tarenaya hassleriana HOM05D006498 ORTHO05D006377 1.8e-48 197.6 418 40.9
unitig_60.g25575 Utricularia gibba HOM05D006498 ORTHO05D006377 6.9e-48 195.7 451 37.5
Potri.006G075000 Populus trichocarpa HOM05D006498 ORTHO05D006377 9.0e-48 195.3 415 43.9
PGR142G3062 Punica granatum HOM05D006498 ORTHO05D006377 9.0e-48 195.3 459 40.7
PGR142G3622 Punica granatum HOM05D006498 ORTHO05D006377 9.0e-48 195.3 459 40.7
CsaV3_1G031910 Cucumis sativus L. HOM05D006498 ORTHO05D006377 1.2e-47 194.9 407 43.2
CDE05G1404 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 2.0e-47 194.1 324 47.5
AT2G19270 Arabidopsis thaliana HOM05D006498 ORTHO05D006377 7.6e-47 192.2 405 42.5
FAN22G0654 Fragaria x ananassa HOM05D006498 ORTHO05D006377 1.0e-46 191.8 484 39.0
DCAR_004773 Daucus carota HOM05D006498 ORTHO05D006377 1.7e-46 191.0 359 44.6
ECA247G1929 Erigeron canadensis HOM05D000109 ORTHO05D006377 1.7e-46 191.0 422 38.6
RcHm_v2.0_Chr4g0399301 Rosa chinensis HOM05D006498 ORTHO05D006377 1.7e-46 191.0 454 41.0
vmacro02834 Vaccinium macrocarpon HOM05D006498 ORTHO05D006377 1.7e-46 191.0 433 40.6
Rhsim13G0054400 Rhododendron simsii HOM05D006498 ORTHO05D006377 4.9e-46 189.5 346 41.0
AL3G49020 Arabidopsis lyrata HOM05D006498 ORTHO05D006377 6.5e-46 189.1 406 42.6
Glyma.17G058700 Glycine max HOM05D006498 ORTHO05D006377 1.9e-45 187.6 400 41.2
Aa31LG8G16310 Aethionema arabicum HOM05D006498 ORTHO05D006377 3.5e-44 183.3 309 46.9
CARHR109730 Cardamine hirsuta HOM05D006498 ORTHO05D006377 3.5e-44 183.3 346 43.6
Hma1.2p1_0491F.1_g164640 Hydrangea macrophylla HOM05D006498 ORTHO05D006377 4.6e-44 183.0 125 72.0
Sabra06G0055700 Salix brachista HOM05D006498 ORTHO05D006377 6.0e-44 182.6 486 38.9
Thhalv10022749m.g Eutrema salsugineum HOM05D006498 ORTHO05D006377 7.9e-44 182.2 405 43.0
PSO063G6554 Papaver somniferum HOM05D006498 ORTHO05D006377 3.9e-43 179.9 264 48.5
EL10Ac8g19141 Beta vulgaris HOM05D006498 ORTHO05D006377 1.5e-42 177.9 420 42.6
PSO170G2385 Papaver somniferum HOM05D006498 ORTHO05D006377 3.3e-42 176.8 352 43.8
AUR62025173 Chenopodium quinoa HOM05D006498 ORTHO05D006377 7.4e-42 175.6 250 46.8
Sp3g32630 Schrenkiella parvula HOM05D006498 ORTHO05D006377 7.4e-42 175.6 393 41.5
Carub.0003s3350 Capsella rubella HOM05D006498 ORTHO05D006377 1.1e-40 171.8 418 40.9
MBI16_g05840_MAGBIO Magnolia biondii HOM05D006498 ORTHO05D006377 2.4e-40 170.6 376 37.5
BcaB03g16716 Brassica carinata HOM05D006498 ORTHO05D006377 2.5e-37 160.6 298 45.6
BolC7t40702H Brassica oleracea HOM05D006498 ORTHO05D006377 3.2e-37 160.2 405 40.0
Actinidia30000 Actinidia chinensis HOM05D006498 ORTHO05D006377 7.1e-37 159.1 272 50.4
Zm00001eb206900 Zea mays HOM05D006498 ORTHO05D006377 9.3e-37 158.7 372 42.5
BcaC06g36544 Brassica carinata HOM05D006498 ORTHO05D006377 2.1e-36 157.5 405 40.5
Lalb_Chr12g0199631 Lupinus albus HOM05D006498 ORTHO05D006377 2.7e-36 157.1 109 68.8
Os02g0175900 Oryza sativa ssp. japonica HOM05D006498 ORTHO05D006377 2.7e-36 157.1 126 67.5
C07p03100 Brassica napus HOM05D006498 ORTHO05D006377 6.1e-36 156.0 381 39.9
HPP92_011644 Vanilla planifolia HOM05D006498 ORTHO05D006377 2.3e-35 154.1 439 33.5
Lsat_1_v5_gn_3_41001 Lactuca sativa HOM05D006498 ORTHO05D006377 6.7e-35 152.5 111 69.4
ATR0626G368 Amborella trichopoda HOM05D006498 ORTHO05D006377 1.6e-33 147.9 468 31.6
Lsat_1_v5_gn_4_158461 Lactuca sativa HOM05D006498 ORTHO05D006377 1.8e-32 144.4 107 69.2
Lsat_1_v5_gn_7_52821 Lactuca sativa HOM05D006498 ORTHO05D006377 3.1e-32 143.7 99 71.7
BraA07t27953Z Brassica rapa HOM05D006498 ORTHO05D006377 4.1e-32 143.3 409 39.9
Cpa.g.sc2680.1 Carica papaya HOM05D006498 ORTHO05D006377 6.9e-32 142.5 377 38.7
A07p01520 Brassica napus HOM05D006498 ORTHO05D006377 2.0e-31 141.0 356 41.3
Zm00001eb233520 Zea mays HOM05D006498 ORTHO05D006377 7.7e-31 139.0 470 35.1
Lsat_1_v5_gn_5_22180 Lactuca sativa HOM05D006498 ORTHO05D006377 1.7e-30 137.9 97 69.1
Lsat_1_v5_gn_9_15580 Lactuca sativa HOM05D006498 ORTHO05D006377 3.8e-30 136.7 95 70.5
Pp3c15_6280 Physcomitrium patens HOM05D006498 ORTHO05D006377 5.0e-30 136.3 263 36.9
Mapoly0001s0081 Marchantia polymorpha HOM05D006498 ORTHO05D006377 5.5e-29 132.9 418 30.4
Lalb_Chr13g0299941 Lupinus albus HOM05D006498 ORTHO05D006377 1.8e-27 127.9 298 36.2
CDE05G1079 Ceratophyllum demersum HOM05D006498 ORTHO05D006377 3.9e-27 126.7 76 82.9
AagrBONN_evm.TU.Sc2ySwM_228.1455 Anthoceros agrestis HOM05D006498 ORTHO05D006377 3.3e-26 123.6 435 36.3
Ah.09g231280 Amaranthus hybridus HOM05D006498 ORTHO05D006377 5.7e-26 122.9 364 38.2
SMO361G0453 Selaginella moellendorffii HOM05D006498 ORTHO05D006377 1.7e-25 121.3 342 31.6
COL.COLO4_06397 Corchorus olitorius HOM05D006498 ORTHO05D006377 2.9e-22 110.5 64 79.7
CBR_g12030 Chara braunii HOM05D006498 ORTHO05D006377 4.2e-21 106.7 84 61.9
QL02p046691 Quercus lobata HOM05D006498 ORTHO05D000004 7.2e-21 105.9 245 44.9
Solyc09g055850.3 Solanum lycopersicum HOM05D006498 ORTHO05D006377 1.0e-19 102.1 53 94.3
Lalb_Chr13g0299961 Lupinus albus HOM05D006498 ORTHO05D006377 7.4e-18 95.9 54 85.2
Lsat_1_v5_gn_4_108221 Lactuca sativa HOM05D006498 ORTHO05D006377 9.7e-18 95.5 62 75.8
QL02p046697 Quercus lobata HOM05D006498 ORTHO05D006377 8.2e-17 92.4 54 77.8
SHI03076 Sapria himalayana HOM05D006498 ORTHO05D006377 1.8e-16 91.3 54 81.5
SGA_v2.0_scaffold95G28701 Striga asiatica HOM05D006498 ORTHO05D006377 3.8e-14 83.6 66 56.1
Sed0023288 Sechium edule HOM05D006498 ORTHO05D006377 2.7e-12 77.4 363 29.2
PRCOL_00004634 Prasinoderma coloniale HOM05D006498 ORTHO05D006377 5.9e-07 59.7 143 30.1
Cre06.g278258 Chlamydomonas reinhardtii HOM05D006498 ORTHO05D006377 3.8e-06 57.0 100 34.0


User provided reference genes

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