Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G843.52 Capsicum annuum HOM05D006919 ORTHO05D008705 3.8e-174 614.8 318 100.0
Sopen03g037620 Solanum pennellii HOM05D006919 ORTHO05D008705 1.2e-167 593.2 318 95.6
PGSC0003DMG402005674 Solanum tuberosum HOM05D006919 ORTHO05D008705 5.9e-167 590.9 318 95.6
Solyc03g118660.3 Solanum lycopersicum HOM05D006919 ORTHO05D008705 2.2e-158 562.4 303 94.4
Dinv08205 Davidia involucrata HOM05D006919 ORTHO05D008705 1.8e-139 499.6 318 80.5
Actinidia18895 Actinidia chinensis HOM05D006919 ORTHO05D008705 3.0e-139 498.8 318 79.6
Nitab4.5_0013135g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.7e-135 485.7 284 88.4
CSS0007871 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 9.5e-133 477.2 320 75.9
Potri.015G037600 Populus trichocarpa HOM05D006919 ORTHO05D008705 1.6e-132 476.5 316 74.4
Migut.D01529 Erythranthe guttata HOM05D006919 ORTHO05D008705 2.8e-132 475.7 317 73.8
Migut.D01538 Erythranthe guttata HOM05D006919 ORTHO05D008705 1.8e-131 473.0 317 73.8
Cc04_g06200 Coffea canephora HOM05D006919 ORTHO05D008705 4.0e-131 471.9 325 72.9
Prupe.5G234100 Prunus persica HOM05D006919 ORTHO05D008705 8.9e-131 470.7 318 74.5
MD06G1227700 Malus domestica HOM05D006919 ORTHO05D008705 2.2e-129 466.1 318 73.0
Atru.chr9.1714 Acer truncatum HOM05D006919 ORTHO05D008705 2.9e-129 465.7 317 71.6
CANSAT80G0223 Cannabis sativa HOM05D006919 ORTHO05D008705 2.9e-129 465.7 318 72.6
TAR629G0573 Trochodendron aralioides HOM05D006919 ORTHO05D008705 4.9e-129 464.9 318 73.3
MSTRG.9306 Avicennia marina HOM05D006919 ORTHO05D008705 5.4e-128 461.5 316 72.5
TPR.G8644 Trifolium pratense HOM05D006919 ORTHO05D008705 1.2e-127 460.3 316 74.1
AUR62020416 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.0e-127 459.5 316 72.8
Glyma.07G102800 Glycine max HOM05D006919 ORTHO05D008705 3.5e-127 458.8 321 72.6
Medtr6g069620 Medicago truncatula HOM05D006919 ORTHO05D008705 3.5e-127 458.8 316 74.4
Oeu026273.1 Olea europaea HOM05D006919 ORTHO05D008705 6.0e-127 458.0 303 75.6
Nn4g24311 Nelumbo nucifera HOM05D006919 ORTHO05D008705 1.0e-126 457.2 318 72.0
Phvul.004G150300 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.0e-126 457.2 318 72.6
QL10p029823 Quercus lobata HOM05D006919 ORTHO05D008705 1.0e-126 457.2 317 72.2
Phvul.004G149400 Phaseolus vulgaris HOM05D006919 ORTHO05D008705 1.3e-126 456.8 318 73.0
Atru.chr9.1680 Acer truncatum HOM05D006919 ORTHO05D008705 3.0e-126 455.7 324 69.8
Psat1g030800 Pisum sativum HOM05D006919 ORTHO05D008705 5.0e-126 454.9 316 72.8
arahy.Tifrunner.gnm1.ann1.CTKR59 Arachis hypogaea HOM05D006919 ORTHO05D008705 1.5e-125 453.4 318 70.8
Lalb_Chr24g0398171 Lupinus albus HOM05D006919 ORTHO05D008705 1.5e-125 453.4 318 70.4
Peaxi162Scf00314g00331 Petunia axillaris HOM05D006919 ORTHO05D008705 4.3e-125 451.8 248 91.1
RcHm_v2.0_Chr7g0178261 Rosa chinensis HOM05D006919 ORTHO05D008705 4.3e-125 451.8 318 70.1
Carub.0001s3766 Capsella rubella HOM05D006919 ORTHO05D008705 1.2e-124 450.3 316 70.9
CiPaw.15G143800 Carya illinoinensis HOM05D006919 ORTHO05D008705 2.8e-124 449.1 318 71.1
FvH4_5g17430 Fragaria vesca HOM05D006919 ORTHO05D008705 3.6e-124 448.7 319 70.5
THA.LOC104820349 Tarenaya hassleriana HOM05D006919 ORTHO05D008705 3.6e-124 448.7 317 71.6
PGR083G2730 Punica granatum HOM05D006919 ORTHO05D008705 6.2e-124 448.0 317 67.5
ECA233G0189 Erigeron canadensis HOM05D006919 ORTHO05D008705 8.1e-124 447.6 314 71.3
TWI81G0447 Tripterygium wilfordii HOM05D006919 ORTHO05D008705 8.1e-124 447.6 318 71.7
AL1G55190 Arabidopsis lyrata HOM05D006919 ORTHO05D008705 1.4e-123 446.8 316 70.3
COL.COLO4_04912 Corchorus olitorius HOM05D006919 ORTHO05D008705 1.4e-123 446.8 316 69.3
BcaB07g33748 Brassica carinata HOM05D006919 ORTHO05D008705 2.3e-123 446.0 316 70.9
A06p04410 Brassica napus HOM05D006919 ORTHO05D008705 2.3e-123 446.0 316 70.6
Sp1g35490 Schrenkiella parvula HOM05D006919 ORTHO05D008705 2.3e-123 446.0 316 69.6
AT1G48550 Arabidopsis thaliana HOM05D006919 ORTHO05D008705 3.1e-123 445.7 316 69.9
C06p03070 Brassica napus HOM05D006919 ORTHO05D008705 3.1e-123 445.7 316 70.6
BolC6t35427H Brassica oleracea HOM05D006919 ORTHO05D008705 3.1e-123 445.7 316 70.6
Duzib205G1348 Durio zibethinus HOM05D006919 ORTHO05D008705 4.0e-123 445.3 314 70.1
Gohir.A07G060000 Gossypium hirsutum HOM05D006919 ORTHO05D008705 4.0e-123 445.3 315 69.2
Gorai.001G068200 Gossypium raimondii HOM05D006919 ORTHO05D008705 5.2e-123 444.9 315 69.2
Lj2g0027212 Lotus japonicus HOM05D006919 ORTHO05D008705 6.8e-123 444.5 306 72.9
BraA06t23646Z Brassica rapa HOM05D006919 ORTHO05D008705 1.2e-122 443.7 318 70.8
Gohir.D07G064700 Gossypium hirsutum HOM05D006919 ORTHO05D008705 2.6e-122 442.6 315 68.9
HanXRQChr05g0142681 Helianthus annuus HOM05D006919 ORTHO05D008705 2.6e-122 442.6 318 68.9
Thecc.03G055400 Theobroma cacao HOM05D006919 ORTHO05D008705 3.4e-122 442.2 314 69.1
CsaV3_1G007200 Cucumis sativus L. HOM05D006919 ORTHO05D008705 4.4e-122 441.8 315 69.8
Thhalv10012210m.g Eutrema salsugineum HOM05D006919 ORTHO05D008705 5.8e-122 441.4 316 69.6
Aqoxy3G04092 Aquilegia oxysepala HOM05D006919 ORTHO05D008705 1.3e-121 440.3 318 68.2
GSVIVG01008449001 Vitis vinifera HOM05D006919 ORTHO05D008705 2.9e-121 439.1 318 69.8
Aa31LG10G5250 Aethionema arabicum HOM05D006919 ORTHO05D008705 4.9e-121 438.3 317 68.8
BcaC08g43045 Brassica carinata HOM05D006919 ORTHO05D008705 6.4e-121 438.0 322 68.9
Hund01978 Selenicereus undatus HOM05D006919 ORTHO05D008705 9.2e-120 434.1 309 69.9
PSO063G3076 Papaver somniferum HOM05D006919 ORTHO05D008705 1.2e-119 433.7 318 69.5
FAN08G0969 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.6e-119 433.3 303 71.0
CSS0013537 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D008705 2.7e-119 432.6 320 71.6
FAN13G2797 Fragaria x ananassa HOM05D006919 ORTHO05D008705 3.5e-119 432.2 303 70.6
AUR62015799 Chenopodium quinoa HOM05D006919 ORTHO05D008705 2.3e-118 429.5 297 72.4
Lsat_1_v5_gn_8_720 Lactuca sativa HOM05D006919 ORTHO05D008705 2.3e-118 429.5 303 69.6
arahy.Tifrunner.gnm1.ann1.95HZXM Arachis hypogaea HOM05D006919 ORTHO05D008705 3.0e-118 429.1 361 62.3
VMungo0464G0753 Vigna mungo HOM05D006919 ORTHO05D008705 8.6e-118 427.6 318 70.4
FAN04G0116 Fragaria x ananassa HOM05D006919 ORTHO05D008705 1.5e-117 426.8 304 70.4
Sed0003421 Sechium edule HOM05D006919 ORTHO05D008705 5.6e-117 424.9 303 70.3
ATR1100G039 Amborella trichopoda HOM05D006919 ORTHO05D008705 3.1e-115 419.1 317 64.7
PSO754G0044 Papaver somniferum HOM05D006919 ORTHO05D008705 3.8e-113 412.1 318 65.4
Manes.06G005400 Manihot esculenta HOM05D006919 ORTHO05D008705 5.1e-110 401.7 269 74.0
Cpa.g.sc3.392 Carica papaya HOM05D006919 ORTHO05D008705 8.7e-110 401.0 338 62.4
Ciclev10010588m.g Citrus clementina HOM05D006919 ORTHO05D008705 8.7e-110 401.0 312 66.7
EL10Ac4g07782 Beta vulgaris HOM05D006919 ORTHO05D008705 7.3e-109 397.9 318 66.0
arahy.Tifrunner.gnm1.ann1.2R737Y Arachis hypogaea HOM05D006919 ORTHO05D008705 3.6e-108 395.6 318 65.1
FAN18G1663 Fragaria x ananassa HOM05D006919 ORTHO05D008705 2.4e-107 392.9 303 67.0
QL10p030230 Quercus lobata HOM05D006919 ORTHO05D008705 4.4e-106 388.7 298 66.1
Nitab4.5_0012026g0010 Nicotiana tabacum HOM05D006919 ORTHO05D008705 2.7e-103 379.4 209 89.5
arahy.Tifrunner.gnm1.ann1.54PB3V Arachis hypogaea HOM05D006919 ORTHO05D008705 1.7e-102 376.7 339 60.5
HPP92_023812 Vanilla planifolia HOM05D006919 ORTHO05D008705 3.3e-101 372.5 316 61.1
Ca_25336_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.2e-96 355.5 270 70.0
Ca_29640_v3 Cicer arietinum L. HOM05D002609 ORTHO05D008705 4.2e-96 355.5 270 70.0
MELO3C002137.2 Cucumis melo HOM05D006919 ORTHO05D008705 1.3e-94 350.5 255 69.8
ClCG04G010590 Citrullus lanatus HOM05D006919 ORTHO05D008705 9.6e-93 344.4 315 59.4
AagrBONN_evm.TU.Sc2ySwM_344.2286 Anthoceros agrestis HOM05D006919 ORTHO05D008705 8.4e-89 331.3 315 50.5
Mapoly0012s0164 Marchantia polymorpha HOM05D006919 ORTHO05D008705 1.0e-86 324.3 322 50.3
vmacro16410 Vaccinium macrocarpon HOM05D006919 ORTHO05D008705 3.3e-85 319.3 255 65.5
Eucgr.B00878 Eucalyptus grandis HOM05D006919 ORTHO05D008705 1.5e-82 310.5 238 63.9
Pp3c2_29770 Physcomitrium patens HOM05D006919 ORTHO05D008705 6.0e-79 298.5 316 45.9
Pp3c1_6570 Physcomitrium patens HOM05D006919 ORTHO05D008705 4.3e-77 292.4 316 46.2
CDE08G0345 Ceratophyllum demersum HOM05D006919 ORTHO05D008705 2.2e-76 290.0 319 48.3
MBI09_g15241_MAGBIO Magnolia biondii HOM05D006919 ORTHO05D008705 2.0e-74 283.5 215 63.7
CARHR038160 Cardamine hirsuta HOM05D006919 ORTHO05D008705 4.2e-72 275.8 194 68.0
Glyma.U031615 Glycine max HOM05D006919 ORTHO05D008705 2.3e-70 270.0 181 72.9
AagrBONN_evm.TU.Sc2ySwM_228.5103 Anthoceros agrestis HOM05D006919 ORTHO05D008705 1.3e-68 264.2 308 42.2
SMO143G0218 Selaginella moellendorffii HOM05D006919 ORTHO05D008705 2.0e-66 256.9 268 50.0
Eucgr.B00996 Eucalyptus grandis HOM05D006919 ORTHO05D008705 2.3e-62 243.4 238 52.9
Haze_18872 Corylus avellana HOM05D006919 ORTHO05D008705 9.7e-61 238.0 332 44.6
CBR_g44935 Chara braunii HOM05D006919 ORTHO05D008705 1.2e-58 231.1 339 39.2
Cfa019651 Carpinus fangiana HOM05D006919 ORTHO05D008705 2.4e-51 206.8 147 68.0
RcHm_v2.0_Chr5g0035741 Rosa chinensis HOM05D006919 ORTHO05D008705 9.1e-43 178.3 142 62.0
Rhsim12G0138200 Rhododendron simsii HOM05D006919 ORTHO05D008705 2.9e-41 173.3 228 46.1
RcHm_v2.0_Chr7g0224581 Rosa chinensis HOM05D006919 ORTHO05D008705 3.8e-41 172.9 129 65.9
arahy.Tifrunner.gnm1.ann1.248BIT Arachis hypogaea HOM05D006919 ORTHO05D008705 4.2e-32 142.9 103 68.9
Lj9A419G30 Lonicera japonica HOM05D006919 ORTHO05D008705 1.3e-28 131.3 247 36.0
Lj9C419T19 Lonicera japonica HOM05D006919 ORTHO05D008705 8.6e-25 118.6 70 87.1
RcHm_v2.0_Chr7g0212051 Rosa chinensis HOM05D006919 ORTHO05D008705 5.6e-24 115.9 88 65.9
SEGI_02358 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 5.6e-24 115.9 93 63.4
CBR_g74660 Chara braunii HOM05D006919 ORTHO05D008705 1.5e-21 107.8 179 36.9
SEGI_39350 Sequoiadendron giganteum HOM05D006919 ORTHO05D008705 2.3e-09 67.4 72 48.6
CSS0046000 Camellia sinensis var. sinensis HOM05D006919 ORTHO05D004872 7.3e-08 62.4 43 69.8
ECA233G3510 Erigeron canadensis HOM05D015936 ORTHO05D022524 3.1e-06 57.0 44 63.6


User provided reference genes

Program Settings