Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G843.3 Capsicum annuum HOM05D007832 ORTHO05D009598 1.9e-93 345.9 180 100.0
CAN.G843.2 Capsicum annuum HOM05D007832 ORTHO05D009598 7.1e-85 317.4 180 91.7
CAN.G843.1 Capsicum annuum HOM05D007832 ORTHO05D009598 1.6e-81 306.2 177 90.4
PGSC0003DMG400005533 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.8e-40 169.9 177 52.0
CAN.G1184.14 Capsicum annuum HOM05D007832 ORTHO05D009598 4.1e-40 168.7 160 55.6
CAN.G843.4 Capsicum annuum HOM05D007832 ORTHO05D009598 5.9e-39 164.9 98 90.8
PGSC0003DMG400035463 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.2e-37 159.1 179 50.8
PGSC0003DMG400039981 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.4e-37 157.5 161 52.2
CAN.G26643.1 Capsicum annuum HOM05D007832 ORTHO05D009598 2.1e-36 156.4 98 86.7
PGSC0003DMG400005534 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.1e-36 154.8 177 49.2
CAN.G1392.11 Capsicum annuum HOM05D007832 ORTHO05D009598 1.0e-35 154.1 160 51.2
Nitab4.5_0000234g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 2.1e-28 129.8 161 47.2
Nitab4.5_0007309g0020 Nicotiana tabacum HOM05D007832 ORTHO05D009598 4.7e-28 128.6 166 45.8
Sopen12g007920 Solanum pennellii HOM05D007832 ORTHO05D009598 1.8e-27 126.7 139 48.9
Sopen12g007950 Solanum pennellii HOM05D007832 ORTHO05D009598 8.8e-27 124.4 139 48.2
Sopen12g025810 Solanum pennellii HOM05D007832 ORTHO05D009598 8.8e-27 124.4 139 47.5
Sopen12g007870 Solanum pennellii HOM05D007832 ORTHO05D009598 2.6e-26 122.9 158 43.7
Peaxi162Scf00440g00014 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-26 122.1 176 39.8
Solyc12g016170.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 4.4e-26 122.1 153 44.4
PGSC0003DMG400034608 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.7e-26 121.7 158 43.7
Sopen12g007960 Solanum pennellii HOM05D007832 ORTHO05D009598 1.3e-25 120.6 158 43.0
PGSC0003DMG400035476 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.3e-25 120.6 158 43.7
PGSC0003DMG400044231 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.2e-25 119.8 158 43.7
PGSC0003DMG400045649 Solanum tuberosum HOM05D007832 ORTHO05D009598 4.9e-25 118.6 158 43.0
Peaxi162Scf00006g00057 Petunia axillaris HOM05D007832 ORTHO05D009598 8.3e-25 117.9 178 39.3
Peaxi162Scf00006g00075 Petunia axillaris HOM05D007832 ORTHO05D009598 8.3e-25 117.9 178 39.3
PGSC0003DMG400005968 Solanum tuberosum HOM05D007832 ORTHO05D009598 1.4e-24 117.1 167 43.1
Solyc12g016180.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 3.1e-24 115.9 153 43.1
PGSC0003DMG400044285 Solanum tuberosum HOM05D007832 ORTHO05D009598 3.3e-21 105.9 151 42.4
PGSC0003DMG400044576 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.5e-21 104.4 143 41.3
Peaxi162Scf00611g00515 Petunia axillaris HOM05D007832 ORTHO05D009598 1.0e-19 100.9 142 40.8
Sopen11g026860 Solanum pennellii HOM05D007832 ORTHO05D009598 1.0e-19 100.9 162 38.9
Nitab4.5_0000153g0130 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.4e-19 100.5 153 40.5
Nitab4.5_0008777g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.8e-19 100.1 143 42.0
PGSC0003DMG400047062 Solanum tuberosum HOM05D007832 ORTHO05D009598 8.9e-19 97.8 158 38.0
Sopen12g025820 Solanum pennellii HOM05D000004 ORTHO05D009598 2.6e-18 96.3 118 45.8
Peaxi162Scf00307g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-18 95.5 141 38.3
Peaxi162Scf00894g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-18 95.5 141 38.3
Peaxi162Scf03110g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 4.4e-18 95.5 141 38.3
Peaxi162Scf00617g00011 Petunia axillaris HOM05D007832 ORTHO05D009598 7.5e-18 94.7 147 36.7
Solyc12g005210.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 9.8e-18 94.4 72 61.1
PGSC0003DMG400046736 Solanum tuberosum HOM05D007832 ORTHO05D009598 9.8e-18 94.4 160 38.8
Peaxi162Scf00593g00002 Petunia axillaris HOM05D014229 ORTHO05D009598 2.9e-17 92.8 153 33.3
Nitab4.5_0000163g0010 Nicotiana tabacum HOM05D007832 ORTHO05D009598 3.7e-17 92.4 158 34.8
PGSC0003DMG400037342 Solanum tuberosum HOM05D007832 ORTHO05D009598 5.9e-15 85.1 157 35.0
Peaxi162Scf00538g00047 Petunia axillaris HOM05D007832 ORTHO05D009598 3.9e-14 82.4 139 33.8
Solyc12g016150.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 3.9e-14 82.4 93 43.0
Peaxi162Scf00617g00012 Petunia axillaris HOM05D007832 ORTHO05D009598 5.0e-14 82.0 134 34.3
Solyc12g017300.1 Solanum lycopersicum HOM05D007832 ORTHO05D009598 6.6e-14 81.6 118 39.0
CAN.G782.17 Capsicum annuum HOM05D007832 ORTHO05D009598 8.6e-14 81.3 153 32.0
Nitab4.5_0003358g0030 Nicotiana tabacum HOM05D007832 ORTHO05D009598 4.3e-13 79.0 151 34.4
Peaxi162Scf00617g00003 Petunia axillaris HOM05D007832 ORTHO05D009598 7.3e-13 78.2 140 35.0
Nitab4.5_0002260g0260 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.2e-12 77.4 152 33.6
Peaxi162Scf00617g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 1.2e-12 77.4 140 32.9
Nitab4.5_0007309g0050 Nicotiana tabacum HOM05D007832 ORTHO05D009598 1.6e-12 77.0 91 46.2
Peaxi162Scf29147g00002 Petunia axillaris HOM05D007832 ORTHO05D009598 2.1e-12 76.6 121 33.9
Nitab4.5_0004114g0070 Nicotiana tabacum HOM05D007832 ORTHO05D009598 4.7e-12 75.5 120 35.0
Sopen12g025800 Solanum pennellii HOM05D007832 ORTHO05D009598 6.2e-12 75.1 76 55.3
Peaxi162Scf00061g00181 Petunia axillaris HOM05D000307 ORTHO05D009598 1.1e-11 74.3 158 32.3
CAN.G1392.12 Capsicum annuum HOM05D007832 ORTHO05D009598 3.1e-11 72.8 76 50.0
Nitab4.5_0000738g0160 Nicotiana tabacum HOM05D000307 ORTHO05D009598 3.1e-11 72.8 157 33.8
CAN.G765.41 Capsicum annuum HOM05D007832 ORTHO05D009598 6.8e-11 71.6 142 29.6
PGSC0003DMG400041411 Solanum tuberosum HOM05D007832 ORTHO05D009598 6.8e-11 71.6 174 31.0
Lj1C377T1 Lonicera japonica HOM05D000307 ORTHO05D000166 1.2e-10 70.9 161 30.4
SGA_v2.0_scaffold153G36988 Striga asiatica HOM05D000307 ORTHO05D009598 2.6e-10 69.7 165 29.7
Lj1C376T8 Lonicera japonica HOM05D000307 ORTHO05D000166 3.4e-10 69.3 161 30.4
Peaxi162Scf01193g00001 Petunia axillaris HOM05D007832 ORTHO05D009598 3.4e-10 69.3 131 32.8
Migut.B01615 Erythranthe guttata HOM05D000307 ORTHO05D009598 5.8e-10 68.6 156 28.2
Thhalv10022157m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 5.8e-10 68.6 157 31.2
Peaxi162Scf00593g00034 Petunia axillaris HOM05D007832 ORTHO05D009598 5.8e-10 68.6 119 31.9
arahy.Tifrunner.gnm1.ann1.29DMCM Arachis hypogaea HOM05D000307 ORTHO05D000166 1.3e-09 67.4 121 30.6
Migut.B01089 Erythranthe guttata HOM05D000307 ORTHO05D000166 2.9e-09 66.2 166 28.9
CAN.G201.31 Capsicum annuum HOM05D007832 ORTHO05D009598 4.9e-09 65.5 121 33.9
AL3G39810 Arabidopsis lyrata HOM05D000307 ORTHO05D000166 1.1e-08 64.3 135 34.8
Thhalv10027229m.g Eutrema salsugineum HOM05D000307 ORTHO05D000166 1.4e-08 63.9 182 26.4
AT5G06500 Arabidopsis thaliana HOM05D000307 ORTHO05D000166 3.2e-08 62.8 130 29.2
BcaB05g21666 Brassica carinata HOM05D008733 ORTHO05D010810 7.0e-08 61.6 138 31.2
PGSC0003DMG400038163 Solanum tuberosum HOM05D007832 ORTHO05D009598 2.0e-07 60.1 97 41.2
FAN03G1227 Fragaria x ananassa HOM05D000307 ORTHO05D000166 3.5e-07 59.3 164 27.4
Sp6g36360 Schrenkiella parvula HOM05D008733 ORTHO05D010810 3.5e-07 59.3 140 29.3
Migut.L00834 Erythranthe guttata HOM05D000307 ORTHO05D000166 7.8e-07 58.2 170 24.1
Lsat_1_v5_gn_2_130741 Lactuca sativa HOM05D000307 ORTHO05D000166 7.8e-07 58.2 127 30.7
unitig_61.g26410 Utricularia gibba HOM05D000307 ORTHO05D000166 7.8e-07 58.2 149 28.2
unitig_0.g1303 Utricularia gibba HOM05D000307 ORTHO05D000166 1.0e-06 57.8 162 25.3
Thhalv10016044m.g Eutrema salsugineum HOM05D000307 ORTHO05D010810 1.3e-06 57.4 131 28.2
Prupe.7G092900 Prunus persica HOM05D000307 ORTHO05D000166 1.3e-06 57.4 162 24.7
unitig_0.g1302 Utricularia gibba HOM05D000307 ORTHO05D000166 1.3e-06 57.4 186 26.3
Peaxi162Scf00380g00621 Petunia axillaris HOM05D000011 ORTHO05D000018 3.0e-06 56.2 84 39.3
CAN.G765.43 Capsicum annuum HOM05D007832 ORTHO05D009598 3.9e-06 55.8 80 42.5
MD12G1199600 Malus domestica HOM05D000307 ORTHO05D000166 3.9e-06 55.8 114 27.2
MD04G1186200 Malus domestica HOM05D000307 ORTHO05D000166 6.6e-06 55.1 161 25.5
MD04G1186300 Malus domestica HOM05D000307 ORTHO05D000166 6.6e-06 55.1 160 22.5
SGA_v2.0_scaffold5G03073 Striga asiatica HOM05D000307 ORTHO05D000166 6.6e-06 55.1 133 27.8


User provided reference genes

Program Settings