Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G843.29 Capsicum annuum HOM05D003632 ORTHO05D005497 2.9e-76 288.5 146 100.0
Nitab4.5_0002450g0120 Nicotiana tabacum HOM05D003632 ORTHO05D005497 1.9e-72 275.8 143 96.5
Nitab4.5_0002046g0120 Nicotiana tabacum HOM05D003632 ORTHO05D005497 4.7e-71 271.2 143 96.5
CAN.G2827.1 Capsicum annuum HOM05D003632 ORTHO05D005497 1.4e-70 269.6 160 88.8
Solyc03g118430.3 Solanum lycopersicum HOM05D003632 ORTHO05D005497 1.8e-70 269.2 143 93.7
Sopen03g037320 Solanum pennellii HOM05D003632 ORTHO05D005497 1.8e-70 269.2 143 93.7
PGSC0003DMG400014254 Solanum tuberosum HOM05D003632 ORTHO05D005497 3.1e-70 268.5 143 93.0
Peaxi162Scf00314g00434 Petunia axillaris HOM05D003632 ORTHO05D005497 5.6e-64 247.7 132 92.4
Oeu015114.3 Olea europaea HOM05D003632 ORTHO05D005497 7.3e-64 247.3 143 83.9
Potri.002G235700 Populus trichocarpa HOM05D003632 ORTHO05D005497 9.0e-62 240.4 143 81.1
Lj5C162T4 Lonicera japonica HOM05D003632 ORTHO05D005497 2.6e-61 238.8 143 82.5
TWI38G0156 Tripterygium wilfordii HOM05D003632 ORTHO05D005497 5.8e-61 237.7 143 80.4
Lalb_Chr09g0320141 Lupinus albus HOM05D003632 ORTHO05D005497 7.6e-61 237.3 143 79.0
Cc04_g05970 Coffea canephora HOM05D003632 ORTHO05D005497 1.7e-60 236.1 143 81.8
Ca_24435_v3 Cicer arietinum L. HOM05D003632 ORTHO05D005497 3.8e-60 235.0 143 79.0
Dinv03487 Davidia involucrata HOM05D003632 ORTHO05D005497 4.9e-60 234.6 143 81.1
Manes.05G198000 Manihot esculenta HOM05D003632 ORTHO05D005497 4.9e-60 234.6 143 79.7
MSTRG.9366 Avicennia marina HOM05D003632 ORTHO05D005497 1.1e-59 233.4 143 78.3
Atru.chr13.15 Acer truncatum HOM05D003632 ORTHO05D005497 1.4e-59 233.0 144 80.6
Glyma.01G233300 Glycine max HOM05D003632 ORTHO05D005497 2.4e-59 232.3 143 79.0
Potri.014G149200 Populus trichocarpa HOM05D003632 ORTHO05D005497 2.4e-59 232.3 143 79.7
Actinidia15538 Actinidia chinensis HOM05D003632 ORTHO05D005497 3.2e-59 231.9 143 79.7
Gorai.002G111600 Gossypium raimondii HOM05D003632 ORTHO05D005497 3.2e-59 231.9 143 77.6
Medtr5g007380 Medicago truncatula HOM05D003632 ORTHO05D005497 3.2e-59 231.9 143 79.0
Sabra14G0112500 Salix brachista HOM05D003632 ORTHO05D005497 5.4e-59 231.1 143 79.0
Glyma.11G009500 Glycine max HOM05D003632 ORTHO05D005497 7.1e-59 230.7 143 79.0
TPR.G38003 Trifolium pratense HOM05D003632 ORTHO05D005497 7.1e-59 230.7 143 77.6
PGR031G0531 Punica granatum HOM05D003632 ORTHO05D005497 1.2e-58 229.9 143 78.3
TWI63G1168 Tripterygium wilfordii HOM05D003632 ORTHO05D005497 1.2e-58 229.9 143 79.0
Duzib093G0207 Durio zibethinus HOM05D003632 ORTHO05D005497 1.6e-58 229.6 143 77.6
Eucgr.F03633 Eucalyptus grandis HOM05D003632 ORTHO05D005497 2.1e-58 229.2 143 79.0
CSS0037547 Camellia sinensis var. sinensis HOM05D003632 ORTHO05D005497 2.7e-58 228.8 143 77.6
Cfa014172 Carpinus fangiana HOM05D003632 ORTHO05D005497 3.5e-58 228.4 143 77.6
GSVIVG01013468001 Vitis vinifera HOM05D003632 ORTHO05D005497 3.5e-58 228.4 143 79.0
Nn6g31540 Nelumbo nucifera HOM05D003632 ORTHO05D005497 4.6e-58 228.0 143 77.6
Sc17g0000620 Simmondsia chinensis HOM05D003632 ORTHO05D005497 4.6e-58 228.0 144 77.8
VMungo1215G1560 Vigna mungo HOM05D003632 ORTHO05D005497 4.6e-58 228.0 143 78.3
Gohir.A01G101300 Gossypium hirsutum HOM05D003632 ORTHO05D005497 6.0e-58 227.6 143 75.5
Psat2g189160 Pisum sativum HOM05D003632 ORTHO05D005497 6.0e-58 227.6 143 78.3
Gohir.D01G086200 Gossypium hirsutum HOM05D003632 ORTHO05D005497 7.9e-58 227.3 143 75.5
Phvul.002G040800 Phaseolus vulgaris HOM05D003632 ORTHO05D005497 7.9e-58 227.3 143 76.9
Haze_22896 Corylus avellana HOM05D003632 ORTHO05D005497 2.3e-57 225.7 143 76.9
Thecc.08G097100 Theobroma cacao HOM05D003632 ORTHO05D005497 2.3e-57 225.7 143 75.5
Ciclev10000050m.g Citrus clementina HOM05D003632 ORTHO05D005497 3.0e-57 225.3 144 79.2
COL.COLO4_04620 Corchorus olitorius HOM05D003632 ORTHO05D005497 3.0e-57 225.3 143 74.8
arahy.Tifrunner.gnm1.ann1.LR79EL Arachis hypogaea HOM05D003632 ORTHO05D005497 3.9e-57 224.9 144 78.5
LjContig00222g0019593 Lotus japonicus HOM05D003632 ORTHO05D005497 3.9e-57 224.9 143 77.6
Duzib248G0791 Durio zibethinus HOM05D003632 ORTHO05D005497 5.1e-57 224.6 143 77.6
CARHR285100 Cardamine hirsuta HOM05D003632 ORTHO05D005497 8.7e-57 223.8 143 75.5
Sed0011503 Sechium edule HOM05D003632 ORTHO05D005497 8.7e-57 223.8 143 76.2
EL10As5g23474 Beta vulgaris HOM05D003632 ORTHO05D005497 1.1e-56 223.4 145 79.3
Prupe.7G271900 Prunus persica HOM05D003632 ORTHO05D005497 1.1e-56 223.4 143 76.9
Migut.D01195 Erythranthe guttata HOM05D003632 ORTHO05D005497 1.9e-56 222.6 144 77.1
Sp7g08050 Schrenkiella parvula HOM05D003632 ORTHO05D005497 1.9e-56 222.6 143 75.5
TAR381G0543 Trochodendron aralioides HOM05D003632 ORTHO05D005497 1.9e-56 222.6 143 75.5
BcaB07g31078 Brassica carinata HOM05D003632 ORTHO05D005497 2.5e-56 222.2 143 75.5
Thhalv10003133m.g Eutrema salsugineum HOM05D003632 ORTHO05D005497 2.5e-56 222.2 143 74.8
PSO017G4161 Papaver somniferum HOM05D003632 ORTHO05D005497 3.3e-56 221.9 143 78.3
Ah.11g049790 Amaranthus hybridus HOM05D003632 ORTHO05D005497 4.3e-56 221.5 146 75.3
A09p19660 Brassica napus HOM05D003632 ORTHO05D005497 4.3e-56 221.5 143 75.5
BraA09t37577Z Brassica rapa HOM05D003632 ORTHO05D005497 4.3e-56 221.5 143 75.5
MELO3C008771.2 Cucumis melo HOM05D003632 ORTHO05D005497 4.3e-56 221.5 143 74.8
CsaV3_2G009400 Cucumis sativus L. HOM05D003632 ORTHO05D005497 4.3e-56 221.5 143 74.8
BcaC04g21997 Brassica carinata HOM05D003632 ORTHO05D005497 5.6e-56 221.1 143 74.8
C09p25020 Brassica napus HOM05D003632 ORTHO05D005497 5.6e-56 221.1 143 74.8
BolC9t55396H Brassica oleracea HOM05D003632 ORTHO05D005497 5.6e-56 221.1 143 74.8
ECA236G2986 Erigeron canadensis HOM05D003632 ORTHO05D005497 5.6e-56 221.1 143 76.2
QL02p016456 Quercus lobata HOM05D003632 ORTHO05D005497 5.6e-56 221.1 142 76.1
FvH4_7g03800 Fragaria vesca HOM05D003632 ORTHO05D005497 1.3e-55 219.9 143 75.5
FAN19G1728 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.3e-55 219.9 143 75.5
DCAR_003535 Daucus carota HOM05D003632 ORTHO05D005497 1.6e-55 219.5 143 77.6
THA.LOC104806863 Tarenaya hassleriana HOM05D003632 ORTHO05D005497 1.6e-55 219.5 143 74.8
Aa31LG9G12540 Aethionema arabicum HOM05D003632 ORTHO05D005497 2.1e-55 219.2 143 74.1
RcHm_v2.0_Chr3g0491051 Rosa chinensis HOM05D003632 ORTHO05D005497 2.1e-55 219.2 143 76.2
THA.LOC104813211 Tarenaya hassleriana HOM05D003632 ORTHO05D005497 2.1e-55 219.2 143 75.5
PSO170G0589 Papaver somniferum HOM05D003632 ORTHO05D005497 2.8e-55 218.8 143 76.9
AL8G19100 Arabidopsis lyrata HOM05D003632 ORTHO05D005497 3.7e-55 218.4 143 73.4
MD00G1204700 Malus domestica HOM05D003632 ORTHO05D005497 4.8e-55 218.0 143 75.5
FAN28G2113 Fragaria x ananassa HOM05D003632 ORTHO05D005497 8.1e-55 217.2 143 74.8
Carub.0008s0677 Capsella rubella HOM05D003632 ORTHO05D005497 1.1e-54 216.9 143 72.7
CiPaw.08G079400 Carya illinoinensis HOM05D003632 ORTHO05D005497 1.1e-54 216.9 143 74.8
CANSAT25G0240 Cannabis sativa HOM05D003632 ORTHO05D005497 1.4e-54 216.5 145 77.2
FAN23G1588 Fragaria x ananassa HOM05D003632 ORTHO05D005497 1.4e-54 216.5 143 74.1
PSO675G5232 Papaver somniferum HOM05D003632 ORTHO05D005497 1.8e-54 216.1 143 76.9
Cpa.g.sc36.89 Carica papaya HOM05D003632 ORTHO05D005497 3.1e-54 215.3 132 80.3
AT5G42390 Arabidopsis thaliana HOM05D003632 ORTHO05D005497 4.0e-54 214.9 143 72.0
MD00G1159400 Malus domestica HOM05D003632 ORTHO05D005497 4.0e-54 214.9 143 74.1
arahy.Tifrunner.gnm1.ann1.WPQ8T0 Arachis hypogaea HOM05D003632 ORTHO05D005497 1.2e-53 213.4 142 73.9
AUR62011864 Chenopodium quinoa HOM05D003632 ORTHO05D005497 1.5e-53 213.0 176 65.9
HanXRQChr15g0481001 Helianthus annuus HOM05D003632 ORTHO05D005497 1.5e-53 213.0 143 72.0
PSO541G6510 Papaver somniferum HOM05D003632 ORTHO05D005497 1.5e-53 213.0 143 75.5
Lsat_1_v5_gn_7_31540 Lactuca sativa HOM05D003632 ORTHO05D005497 5.8e-53 211.1 144 73.6
Aqoxy5G00932 Aquilegia oxysepala HOM05D003632 ORTHO05D005497 7.6e-53 210.7 144 73.6
HanXRQChr04g0119021 Helianthus annuus HOM05D003632 ORTHO05D005497 2.9e-52 208.8 144 73.6
Os06g0625400 Oryza sativa ssp. japonica HOM05D003632 ORTHO05D005497 1.9e-51 206.1 144 70.1
ATR0605G213 Amborella trichopoda HOM05D003632 ORTHO05D005497 3.2e-51 205.3 144 72.2
Zm00001eb275640 Zea mays HOM05D003632 ORTHO05D005497 5.5e-51 204.5 144 69.4
AUR62024707 Chenopodium quinoa HOM05D003632 ORTHO05D005497 1.6e-50 203.0 112 86.6
Zm00001eb387800 Zea mays HOM05D003632 ORTHO05D005497 1.6e-50 203.0 144 70.1
CANSAT01G2380 Cannabis sativa HOM05D003632 ORTHO05D005497 7.9e-50 200.7 143 71.3
CDE06G0366 Ceratophyllum demersum HOM05D003632 ORTHO05D005497 1.3e-49 199.9 144 72.9
MBI01_g09379_MAGBIO Magnolia biondii HOM05D003632 ORTHO05D005497 1.3e-49 199.9 134 73.1
Hund02917 Selenicereus undatus HOM05D003632 ORTHO05D005497 2.3e-49 199.1 112 83.0
SalBow1G1353 Salvia bowleyana HOM05D003632 ORTHO05D005497 1.5e-48 196.4 115 81.7
CAN.G1425.13 Capsicum annuum HOM05D003632 ORTHO05D005497 2.5e-48 195.7 144 75.7
unitig_0.g345 Utricularia gibba HOM05D003632 ORTHO05D005497 1.6e-47 193.0 106 87.7
SHI18575 Sapria himalayana HOM05D003632 ORTHO05D005497 1.1e-46 190.3 145 65.5
Lalb_Chr16g0376561 Lupinus albus HOM05D003632 ORTHO05D005497 3.1e-46 188.7 130 70.8
Rhsim02G0142400 Rhododendron simsii HOM05D003632 ORTHO05D005497 4.0e-46 188.3 112 80.4
FvH4_1g30291 Fragaria vesca HOM05D003632 ORTHO05D005497 7.6e-45 184.1 112 78.6
HPP92_022034 Vanilla planifolia HOM05D003632 ORTHO05D005497 3.5e-42 175.3 116 72.4
FAN03G3001 Fragaria x ananassa HOM05D003632 ORTHO05D005497 3.0e-41 172.2 116 72.4
CDE07G1872 Ceratophyllum demersum HOM05D003632 ORTHO05D005497 2.5e-40 169.1 121 73.6
SMO117G0011 Selaginella moellendorffii HOM05D003632 ORTHO05D005497 4.8e-39 164.9 149 57.7
Mapoly0022s0090 Marchantia polymorpha HOM05D003632 ORTHO05D005497 8.2e-39 164.1 146 57.5
CBR_g32249 Chara braunii HOM05D003632 ORTHO05D005497 1.2e-37 160.2 155 54.2
Pp3c16_2100 Physcomitrium patens HOM05D003632 ORTHO05D005497 4.5e-37 158.3 145 55.9
Cre17.g723250 Chlamydomonas reinhardtii HOM05D003632 ORTHO05D005497 2.2e-23 112.8 141 39.7
PRCOL_00001043 Prasinoderma coloniale HOM05D003632 ORTHO05D005497 4.8e-23 111.7 106 50.0
MCO10G275 Micromonas commoda HOM05D003632 ORTHO05D005497 3.4e-21 105.5 106 47.2
SEGI_17718 Sequoiadendron giganteum HOM05D003632 ORTHO05D005497 7.7e-21 104.4 62 77.4
AagrBONN_evm.TU.Sc2ySwM_117.2840 Anthoceros agrestis HOM05D003632 ORTHO05D005497 8.2e-15 84.3 62 61.3
SEGI_24244 Sequoiadendron giganteum HOM05D001800 ORTHO05D000007 7.0e-14 81.3 84 46.4


User provided reference genes

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