Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G843.14 Capsicum annuum HOM05D006891 ORTHO05D008671 2.0e-175 619.0 316 100.0
Nitab4.5_0000976g0010 Nicotiana tabacum HOM05D006891 ORTHO05D008671 1.0e-158 563.5 327 90.2
PGSC0003DMG400014243 Solanum tuberosum HOM05D006891 ORTHO05D008671 3.8e-158 561.6 328 89.3
Sopen03g037150 Solanum pennellii HOM05D006891 ORTHO05D008671 2.1e-156 555.8 328 88.7
Solyc03g118240.4 Solanum lycopersicum HOM05D006891 ORTHO05D008671 2.7e-156 555.4 328 89.0
Peaxi162Scf00314g00625 Petunia axillaris HOM05D006891 ORTHO05D008671 5.7e-146 521.2 324 84.9
Dinv13725 Davidia involucrata HOM05D006891 ORTHO05D008671 7.7e-143 510.8 329 79.3
CSS0004907 Camellia sinensis var. sinensis HOM05D006891 ORTHO05D008671 6.8e-139 497.7 324 78.1
Actinidia18305 Actinidia chinensis HOM05D006891 ORTHO05D008671 8.8e-139 497.3 321 78.5
Lj9C486T5 Lonicera japonica HOM05D006891 ORTHO05D008671 2.2e-137 492.7 325 78.8
Nn3g16285 Nelumbo nucifera HOM05D006891 ORTHO05D008671 2.2e-137 492.7 316 79.7
QL10p000565 Quercus lobata HOM05D006891 ORTHO05D008671 1.1e-136 490.3 328 77.7
Gorai.001G054400 Gossypium raimondii HOM05D006891 ORTHO05D008671 9.1e-136 487.3 335 76.1
COL.COLO4_37249 Corchorus olitorius HOM05D006891 ORTHO05D008671 1.6e-135 486.5 328 77.7
Gohir.D07G051300 Gossypium hirsutum HOM05D006891 ORTHO05D008671 5.9e-135 484.6 335 75.5
Gohir.A07G047000 Gossypium hirsutum HOM05D006891 ORTHO05D008671 1.0e-134 483.8 335 75.5
Cfa018711 Carpinus fangiana HOM05D006891 ORTHO05D008671 2.2e-134 482.6 326 76.4
Cpa.g.sc13.164 Carica papaya HOM05D006891 ORTHO05D008671 2.9e-134 482.3 313 77.6
Haze_07102 Corylus avellana HOM05D006891 ORTHO05D008671 6.5e-134 481.1 326 76.4
vmacro19179 Vaccinium macrocarpon HOM05D006891 ORTHO05D008671 1.1e-133 480.3 329 76.0
CiPaw.12G001000 Carya illinoinensis HOM05D006891 ORTHO05D008671 3.2e-133 478.8 330 75.5
Duzib205G0665 Durio zibethinus HOM05D006891 ORTHO05D008671 9.4e-133 477.2 304 80.3
TAR475G0005 Trochodendron aralioides HOM05D006891 ORTHO05D008671 9.4e-133 477.2 316 76.6
Lalb_Chr13g0296991 Lupinus albus HOM05D006891 ORTHO05D008671 3.6e-132 475.3 318 74.8
Thecc.03G139800 Theobroma cacao HOM05D006891 ORTHO05D008671 3.6e-132 475.3 303 79.9
Ciclev10032123m.g Citrus clementina HOM05D006891 ORTHO05D008671 8.0e-132 474.2 325 76.9
Eucgr.G02043 Eucalyptus grandis HOM05D006891 ORTHO05D008671 1.0e-131 473.8 293 81.6
TWI39G1149 Tripterygium wilfordii HOM05D006891 ORTHO05D008671 1.0e-131 473.8 316 77.2
DCAR_025652 Daucus carota HOM05D006891 ORTHO05D008671 1.8e-131 473.0 322 75.8
MSTRG.4642 Avicennia marina HOM05D006891 ORTHO05D008671 2.3e-131 472.6 322 73.9
Migut.D01186 Erythranthe guttata HOM05D006891 ORTHO05D008671 1.7e-129 466.5 321 73.5
Atru.chr6.1910 Acer truncatum HOM05D006891 ORTHO05D008671 2.2e-129 466.1 286 83.6
Lsat_1_v5_gn_4_84561 Lactuca sativa HOM05D006891 ORTHO05D008671 2.2e-129 466.1 323 76.2
PSO478G3300 Papaver somniferum HOM05D006891 ORTHO05D008671 2.4e-128 462.6 337 73.3
PSO017G2699 Papaver somniferum HOM05D006891 ORTHO05D008671 3.1e-128 462.2 337 73.0
Glyma.08G007900 Glycine max HOM05D006891 ORTHO05D008671 5.4e-128 461.5 326 73.9
Rhsim08G0196800 Rhododendron simsii HOM05D006891 ORTHO05D008671 1.2e-127 460.3 323 74.3
VMungo0251G3529 Vigna mungo HOM05D006891 ORTHO05D008671 1.2e-127 460.3 325 74.2
Glyma.05G200500 Glycine max HOM05D006891 ORTHO05D008671 2.0e-127 459.5 326 74.5
HanXRQChr11g0350211 Helianthus annuus HOM05D006891 ORTHO05D008671 3.5e-127 458.8 323 75.9
Sabra12G0078900 Salix brachista HOM05D006891 ORTHO05D008671 5.9e-127 458.0 340 71.8
HanXRQChr09g0273851 Helianthus annuus HOM05D006891 ORTHO05D008671 7.7e-127 457.6 323 75.9
Lj4g0024376 Lotus japonicus HOM05D006891 ORTHO05D008671 7.7e-127 457.6 290 81.0
Prupe.5G142500 Prunus persica HOM05D006891 ORTHO05D008671 2.3e-126 456.1 323 72.4
Phvul.002G281900 Phaseolus vulgaris HOM05D006891 ORTHO05D008671 3.8e-126 455.3 325 73.5
SGA_v2.0_scaffold40G15677 Striga asiatica HOM05D006891 ORTHO05D008671 3.8e-126 455.3 322 72.4
Aqoxy5G03144 Aquilegia oxysepala HOM05D006891 ORTHO05D008671 6.6e-126 454.5 321 73.8
FvH4_5g09430 Fragaria vesca HOM05D006891 ORTHO05D008671 8.6e-126 454.1 319 72.1
Sc04g0000210 Simmondsia chinensis HOM05D006891 ORTHO05D008671 1.9e-125 453.0 290 81.0
MBI04_g35563_MAGBIO Magnolia biondii HOM05D006891 ORTHO05D008671 1.2e-124 450.3 285 78.9
MD14G1147900 Malus domestica HOM05D006891 ORTHO05D008671 1.6e-124 449.9 322 71.1
FAN08G0367 Fragaria x ananassa HOM05D006891 ORTHO05D008671 2.1e-124 449.5 317 72.2
arahy.Tifrunner.gnm1.ann1.5G0V08 Arachis hypogaea HOM05D006891 ORTHO05D008671 2.8e-124 449.1 304 75.7
PGR142G3013 Punica granatum HOM05D006891 ORTHO05D008671 3.6e-124 448.7 297 77.1
Manes.06G126400 Manihot esculenta HOM05D006891 ORTHO05D008671 1.0e-123 447.2 324 72.2
FAN04G1325 Fragaria x ananassa HOM05D006891 ORTHO05D008671 1.8e-123 446.4 319 71.8
MD06G1131500 Malus domestica HOM05D006891 ORTHO05D008671 1.5e-122 443.4 315 71.7
Sed0026594 Sechium edule HOM05D006891 ORTHO05D008671 1.5e-122 443.4 309 73.1
RcHm_v2.0_Chr7g0188761 Rosa chinensis HOM05D006891 ORTHO05D008671 3.4e-122 442.2 319 71.2
CsaV3_1G000080 Cucumis sativus L. HOM05D006891 ORTHO05D008671 1.7e-121 439.9 306 74.2
Aa31LG7G10590 Aethionema arabicum HOM05D006891 ORTHO05D008671 2.8e-121 439.1 302 74.5
ClCG06G018350 Citrullus lanatus HOM05D006891 ORTHO05D008671 4.9e-121 438.3 285 78.2
FAN18G0906 Fragaria x ananassa HOM05D006891 ORTHO05D008671 6.3e-121 438.0 320 70.6
MELO3C026160.2 Cucumis melo HOM05D006891 ORTHO05D008671 4.1e-120 435.3 273 80.2
CDE11G0769 Ceratophyllum demersum HOM05D006891 ORTHO05D008671 7.0e-120 434.5 318 73.6
GSVIVG01008643001 Vitis vinifera HOM05D006891 ORTHO05D008671 2.0e-119 433.0 326 72.1
Sp7g23060 Schrenkiella parvula HOM05D006891 ORTHO05D008671 4.5e-119 431.8 298 73.2
Thhalv10025780m.g Eutrema salsugineum HOM05D006891 ORTHO05D008671 1.0e-118 430.6 298 73.2
Medtr8g100120 Medicago truncatula HOM05D006891 ORTHO05D008671 8.6e-118 427.6 328 69.5
CARHR232470 Cardamine hirsuta HOM05D006891 ORTHO05D008671 1.1e-117 427.2 298 73.5
AL7G28070 Arabidopsis lyrata HOM05D006891 ORTHO05D008671 1.5e-117 426.8 298 72.8
ECA232G2217 Erigeron canadensis HOM05D006891 ORTHO05D008671 1.9e-117 426.4 320 71.9
Carub.0007s1596 Capsella rubella HOM05D006891 ORTHO05D008671 2.5e-117 426.0 298 72.8
AT4G25080 Arabidopsis thaliana HOM05D006891 ORTHO05D008671 4.3e-117 425.2 298 73.2
BcaC09g50812 Brassica carinata HOM05D006891 ORTHO05D008671 9.5e-117 424.1 285 75.4
BcaNung03997 Brassica carinata HOM05D006891 ORTHO05D008671 9.5e-117 424.1 302 71.9
A03p55730 Brassica napus HOM05D006891 ORTHO05D008671 1.2e-116 423.7 319 69.3
BraA03t14640Z Brassica rapa HOM05D006891 ORTHO05D008671 1.2e-116 423.7 299 72.2
A01p16330 Brassica napus HOM05D006891 ORTHO05D008671 2.1e-116 422.9 285 75.4
C01p20480 Brassica napus HOM05D006891 ORTHO05D008671 2.8e-116 422.5 285 75.1
C07p53960 Brassica napus HOM05D006891 ORTHO05D008671 2.8e-116 422.5 299 71.9
BolC1t01979H Brassica oleracea HOM05D006891 ORTHO05D008671 2.8e-116 422.5 285 75.1
BraA01t01588Z Brassica rapa HOM05D006891 ORTHO05D008671 2.8e-116 422.5 285 75.4
arahy.Tifrunner.gnm1.ann1.0QZ944 Arachis hypogaea HOM05D006891 ORTHO05D008671 5.2e-115 418.3 304 72.4
AUR62009532 Chenopodium quinoa HOM05D006891 ORTHO05D008671 6.8e-115 417.9 260 81.2
SalBow1G6359 Salvia bowleyana HOM05D006891 ORTHO05D008671 1.3e-113 413.7 319 68.7
Psat7g039320 Pisum sativum HOM05D006891 ORTHO05D008671 2.2e-113 412.9 329 67.5
BolC7t45886H Brassica oleracea HOM05D006891 ORTHO05D008671 1.1e-112 410.6 299 70.6
unitig_736.g22830 Utricularia gibba HOM05D002810 ORTHO05D003983 5.4e-112 408.3 307 68.4
TPR.G12963 Trifolium pratense HOM05D006891 ORTHO05D008671 6.0e-111 404.8 297 71.0
Hund02505 Selenicereus undatus HOM05D006891 ORTHO05D008671 4.3e-109 398.7 233 85.4
CANSAT56G0245 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-108 396.7 239 82.0
CANSAT56G1732 Cannabis sativa HOM05D006891 ORTHO05D008671 1.6e-108 396.7 239 82.0
HPP92_020658 Vanilla planifolia HOM05D006891 ORTHO05D008671 8.0e-108 394.4 287 70.4
AUR62041695 Chenopodium quinoa HOM05D006891 ORTHO05D008671 4.4e-106 388.7 292 70.9
Potri.012G106600 Populus trichocarpa HOM05D006891 ORTHO05D008671 9.8e-106 387.5 233 81.5
SEGI_33809 Sequoiadendron giganteum HOM05D006891 ORTHO05D008671 7.8e-103 377.9 277 69.0
THA.LOC104811559 Tarenaya hassleriana HOM05D006891 ORTHO05D008671 7.8e-103 377.9 234 79.9
ATR0579G076 Amborella trichopoda HOM05D006891 ORTHO05D008671 4.7e-100 368.6 242 75.2
AagrBONN_evm.TU.Sc2ySwM_368.2875 Anthoceros agrestis HOM05D006891 ORTHO05D008671 1.4e-96 357.1 270 65.6
Pp3c12_24890 Physcomitrium patens HOM05D006891 ORTHO05D008671 1.7e-94 350.1 269 66.5
SMO115G0098 Selaginella moellendorffii HOM05D006891 ORTHO05D008671 2.3e-94 349.7 315 60.6
Ah.11g046860 Amaranthus hybridus HOM05D006891 ORTHO05D008671 1.9e-93 346.7 211 82.5
Mapoly0112s0034 Marchantia polymorpha HOM05D006891 ORTHO05D008671 1.2e-90 337.4 266 63.9
EL10Ac5g11293 Beta vulgaris HOM05D006891 ORTHO05D008671 1.5e-90 337.0 316 60.1
Cre12.g498550 Chlamydomonas reinhardtii HOM05D006891 ORTHO05D008671 3.9e-86 322.4 266 60.9
Zm00001eb269720 Zea mays HOM05D006891 ORTHO05D008671 7.6e-82 308.1 251 62.2
MCO11G158 Micromonas commoda HOM05D006891 ORTHO05D008671 5.6e-77 292.0 273 56.0
Ca_16812_v3 Cicer arietinum L. HOM05D006891 ORTHO05D008671 2.1e-71 273.5 229 66.4
unitig_899.g14822 Utricularia gibba HOM05D002810 ORTHO05D003983 8.1e-68 261.5 304 51.3
Hma1.2p1_0577F.1_g182340 Hydrangea macrophylla HOM05D006891 ORTHO05D008671 1.0e-65 254.6 198 69.7
AUR62044303 Chenopodium quinoa HOM05D006891 ORTHO05D008671 5.7e-61 238.8 234 58.5
Potri.015G105702 Populus trichocarpa HOM05D006891 ORTHO05D008671 2.0e-58 230.3 230 57.0
Dinv23219 Davidia involucrata HOM05D006891 ORTHO05D008671 2.9e-57 226.5 153 75.8
Os06g0132400 Oryza sativa ssp. japonica HOM05D006891 ORTHO05D008671 2.3e-38 163.7 103 70.9
SGA_v2.0_scaffold377G50317 Striga asiatica HOM05D006891 ORTHO05D008671 8.0e-23 112.1 68 79.4
CBR_g32078 Chara braunii HOM05D006891 ORTHO05D008671 2.0e-18 97.4 70 64.3
Eucgr.G02044 Eucalyptus grandis HOM05D006891 ORTHO05D008671 5.9e-10 69.3 107 45.8
BraA03t14643Z Brassica rapa HOM05D006891 ORTHO05D033303 3.6e-07 60.1 64 56.2
Lsat_1_v5_gn_6_13761 Lactuca sativa HOM05D000295 ORTHO05D000188 2.3e-06 57.4 119 34.5


User provided reference genes

Program Settings