Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G841.22 Capsicum annuum HOM05D017354 ORTHO05D018853 1.1e-99 366.7 191 100.0
CAN.G598.2 Capsicum annuum HOM05D017354 ORTHO05D018853 7.9e-42 174.5 205 53.7
CAN.G835.13 Capsicum annuum HOM05D017354 ORTHO05D018853 2.0e-37 159.8 156 58.3
CAN.G835.7 Capsicum annuum HOM05D017354 ORTHO05D018853 2.6e-37 159.5 247 44.5
CAN.G835.9 Capsicum annuum HOM05D017354 ORTHO05D018853 3.6e-26 122.5 102 65.7
CAN.G308.24 Capsicum annuum HOM05D017354 ORTHO05D018853 1.5e-24 117.1 90 66.7
CAN.G835.12 Capsicum annuum HOM05D017354 ORTHO05D018853 3.8e-20 102.4 76 75.0
Nitab4.5_0004277g0030 Nicotiana tabacum HOM05D001000 ORTHO05D001896 1.6e-13 80.5 79 55.7
PGSC0003DMG400045504 Solanum tuberosum HOM05D014815 ORTHO05D017127 1.8e-09 67.0 143 33.6
Dinv31742 Davidia involucrata HOM05D001000 ORTHO05D001896 2.3e-09 66.6 84 50.0
Lj5g0023342 Lotus japonicus HOM05D001000 ORTHO05D001896 3.0e-09 66.2 138 39.9
Psat3g030320 Pisum sativum HOM05D001000 ORTHO05D001896 6.8e-09 65.1 84 48.8
Atru.chr12.1059 Acer truncatum HOM05D001000 ORTHO05D001896 1.5e-08 63.9 56 64.3
COL.COLO4_37435 Corchorus olitorius HOM05D001000 ORTHO05D001896 2.0e-08 63.5 65 56.9
TAR633G2146 Trochodendron aralioides HOM05D001000 ORTHO05D001896 2.0e-08 63.5 88 47.7
Ca_09039_v3 Cicer arietinum L. HOM05D001000 ORTHO05D001896 2.6e-08 63.2 84 48.8
Peaxi162Scf00519g00047 Petunia axillaris HOM05D001000 ORTHO05D001896 2.6e-08 63.2 85 49.4
VMungo1383G2300 Vigna mungo HOM05D001000 ORTHO05D001896 3.4e-08 62.8 138 38.4
CANSAT56G4195 Cannabis sativa HOM05D001000 ORTHO05D001896 4.4e-08 62.4 85 49.4
Lsat_1_v5_gn_2_105761 Lactuca sativa HOM05D001000 ORTHO05D001896 4.4e-08 62.4 117 40.2
DCAR_006331 Daucus carota HOM05D001000 ORTHO05D001896 5.7e-08 62.0 69 56.5
Duzib114G0026 Durio zibethinus HOM05D001000 ORTHO05D001896 5.7e-08 62.0 81 50.6
TAR623G0951 Trochodendron aralioides HOM05D001000 ORTHO05D001896 5.7e-08 62.0 96 46.9
CANSAT64G2242 Cannabis sativa HOM05D001000 ORTHO05D001896 7.5e-08 61.6 106 42.5
CAN.G835.11 Capsicum annuum HOM05D017354 ORTHO05D018853 9.8e-08 61.2 77 51.9
Ciclev10016377m.g Citrus clementina HOM05D001000 ORTHO05D001896 9.8e-08 61.2 77 46.8
Sed0016928 Sechium edule HOM05D001000 ORTHO05D001896 9.8e-08 61.2 117 41.9
PGR044G1080 Punica granatum HOM05D001000 ORTHO05D001896 1.3e-07 60.8 56 62.5
CiPaw.13G042900 Carya illinoinensis HOM05D001000 ORTHO05D001896 1.7e-07 60.5 75 50.7
Lalb_Chr21g0309071 Lupinus albus HOM05D001000 ORTHO05D001896 1.7e-07 60.5 100 47.0
PSO384G5089 Papaver somniferum HOM05D001000 ORTHO05D001896 1.7e-07 60.5 85 45.9
CSS0030687 Camellia sinensis var. sinensis HOM05D001000 ORTHO05D001896 2.2e-07 60.1 84 48.8
CSS0043313 Camellia sinensis var. sinensis HOM05D001000 ORTHO05D001896 2.2e-07 60.1 84 48.8
COL.COLO4_29618 Corchorus olitorius HOM05D001000 ORTHO05D001896 2.2e-07 60.1 61 54.1
Manes.07G085600 Manihot esculenta HOM05D001000 ORTHO05D001896 2.2e-07 60.1 101 43.6
Medtr1g111640 Medicago truncatula HOM05D001000 ORTHO05D001896 2.2e-07 60.1 81 53.1
PSO339G2273 Papaver somniferum HOM05D001000 ORTHO05D001896 2.2e-07 60.1 85 45.9
Phvul.007G024100 Phaseolus vulgaris HOM05D001000 ORTHO05D001896 2.2e-07 60.1 81 50.6
Sabra10G0189000 Salix brachista HOM05D001000 ORTHO05D001896 2.2e-07 60.1 127 39.4
Thecc.10G115800 Theobroma cacao HOM05D001000 ORTHO05D001896 2.2e-07 60.1 100 47.0
Oeu033284.1 Olea europaea HOM05D001000 ORTHO05D001896 2.8e-07 59.7 81 49.4
Rhsim03G0096600 Rhododendron simsii HOM05D001000 ORTHO05D001896 2.8e-07 59.7 102 41.2
TPR.G20718 Trifolium pratense HOM05D001000 ORTHO05D001896 2.8e-07 59.7 82 47.6
ClCG05G021880 Citrullus lanatus HOM05D001000 ORTHO05D001896 3.7e-07 59.3 81 48.1
Eucgr.A02609 Eucalyptus grandis HOM05D001000 ORTHO05D001896 3.7e-07 59.3 58 46.6
Glyma.20G112400 Glycine max HOM05D001000 ORTHO05D001896 3.7e-07 59.3 81 50.6
Hma1.2p1_0064F.1_g034870 Hydrangea macrophylla HOM05D001000 ORTHO05D001896 3.7e-07 59.3 84 47.6
Lsat_1_v5_gn_2_105781 Lactuca sativa HOM05D001000 ORTHO05D010404 3.7e-07 59.3 101 44.6
MD14G1035600 Malus domestica HOM05D001000 ORTHO05D001896 3.7e-07 59.3 85 44.7
Psat6g230280 Pisum sativum HOM05D001000 ORTHO05D001896 3.7e-07 59.3 185 35.1
VMungo0720G2559 Vigna mungo HOM05D001000 ORTHO05D001896 3.7e-07 59.3 81 50.6
Duzib106G1160 Durio zibethinus HOM05D001000 ORTHO05D001896 4.8e-07 58.9 84 47.6
Lj2C34T8 Lonicera japonica HOM05D001000 ORTHO05D001896 4.8e-07 58.9 101 45.5
Solyc10g082060.1 Solanum lycopersicum HOM05D014815 ORTHO05D017127 4.8e-07 58.9 147 33.3
Solyc11g006670.1 Solanum lycopersicum HOM05D001000 ORTHO05D001896 4.8e-07 58.9 98 44.9
Nitab4.5_0001047g0050 Nicotiana tabacum HOM05D001000 ORTHO05D001896 6.3e-07 58.5 79 49.4
Nitab4.5_0003787g0020 Nicotiana tabacum HOM05D001000 ORTHO05D001896 6.3e-07 58.5 79 49.4
CiPaw.14G034400 Carya illinoinensis HOM05D001000 ORTHO05D001896 8.3e-07 58.2 100 47.0
DCAR_013428 Daucus carota HOM05D001000 ORTHO05D001896 8.3e-07 58.2 77 44.2
Glyma.10G277300 Glycine max HOM05D001000 ORTHO05D001896 8.3e-07 58.2 81 49.4
HanXRQChr11g0341931 Helianthus annuus HOM05D001000 ORTHO05D001896 8.3e-07 58.2 69 43.5
Phvul.001G194000 Phaseolus vulgaris HOM05D001000 ORTHO05D001896 8.3e-07 58.2 117 39.3
Potri.008G017500 Populus trichocarpa HOM05D001000 ORTHO05D001896 8.3e-07 58.2 100 43.0
TAR369G0145 Trochodendron aralioides HOM05D001000 ORTHO05D001896 8.3e-07 58.2 94 43.6
Actinidia03843 Actinidia chinensis HOM05D001000 ORTHO05D001896 1.1e-06 57.8 56 58.9
MELO3C012340.2 Cucumis melo HOM05D001000 ORTHO05D001896 1.1e-06 57.8 108 39.8
Eucgr.J00277 Eucalyptus grandis HOM05D001000 ORTHO05D001896 1.1e-06 57.8 131 38.9
Gohir.A06G169700 Gossypium hirsutum HOM05D001000 ORTHO05D001896 1.1e-06 57.8 100 46.0
Gorai.N007900 Gossypium raimondii HOM05D001000 ORTHO05D001896 1.1e-06 57.8 100 46.0
Sabra08G0011000 Salix brachista HOM05D001000 ORTHO05D001896 1.1e-06 57.8 100 43.0
Dinv12320 Davidia involucrata HOM05D001000 ORTHO05D001896 1.4e-06 57.4 155 33.5
FAN05G4507 Fragaria x ananassa HOM05D001000 ORTHO05D001896 1.4e-06 57.4 70 47.1
FAN05G4882 Fragaria x ananassa HOM05D001000 ORTHO05D001896 1.4e-06 57.4 70 47.1
HanXRQChr02g0053511 Helianthus annuus HOM05D001000 ORTHO05D001896 1.4e-06 57.4 60 50.0
MD07G1061800 Malus domestica HOM05D001000 ORTHO05D001896 1.4e-06 57.4 51 58.8
Nitab4.5_0005214g0020 Nicotiana tabacum HOM05D001000 ORTHO05D001896 1.4e-06 57.4 58 60.3
PGSC0003DMG400040827 Solanum tuberosum HOM05D014815 ORTHO05D017127 1.4e-06 57.4 192 29.7
CAN.G143.14 Capsicum annuum HOM05D001000 ORTHO05D001896 1.8e-06 57.0 79 50.6
CsaV3_5G035260 Cucumis sativus L. HOM05D001000 ORTHO05D001896 1.8e-06 57.0 119 39.5
Duzib128G0514 Durio zibethinus HOM05D001000 ORTHO05D001896 1.8e-06 57.0 75 50.7
Sed0016750 Sechium edule HOM05D001000 ORTHO05D001896 1.8e-06 57.0 81 45.7
MSTRG.9045 Avicennia marina HOM05D001000 ORTHO05D001896 2.4e-06 56.6 56 53.6
Cc02_g09500 Coffea canephora HOM05D001000 ORTHO05D001896 2.4e-06 56.6 73 52.1
Gohir.D06G177300 Gossypium hirsutum HOM05D001000 ORTHO05D001896 2.4e-06 56.6 137 38.7
Nn6g34762 Nelumbo nucifera HOM05D001000 ORTHO05D001896 2.4e-06 56.6 76 48.7
RcHm_v2.0_Chr3g0475291 Rosa chinensis HOM05D001000 ORTHO05D001896 2.4e-06 56.6 92 42.4
THA.LOC104803475 Tarenaya hassleriana HOM05D001000 ORTHO05D001896 2.4e-06 56.6 109 34.9
GSVIVG01034649001 Vitis vinifera HOM05D001000 ORTHO05D001896 2.4e-06 56.6 81 50.6
Atru.chr8.1399 Acer truncatum HOM05D001000 ORTHO05D001896 3.1e-06 56.2 84 46.4
Ca_25649_v3 Cicer arietinum L. HOM05D001000 ORTHO05D001896 3.1e-06 56.2 47 63.8
Gohir.A01G202700 Gossypium hirsutum HOM05D001000 ORTHO05D001896 3.1e-06 56.2 106 44.3
Gohir.D04G095500 Gossypium hirsutum HOM05D001000 ORTHO05D001896 3.1e-06 56.2 84 47.6
Lj1P1044T15 Lonicera japonica HOM05D001000 ORTHO05D001896 3.1e-06 56.2 84 44.0
Lalb_Chr06g0166271 Lupinus albus HOM05D001000 ORTHO05D001896 3.1e-06 56.2 81 48.1
Potri.010G241500 Populus trichocarpa HOM05D001000 ORTHO05D001896 3.1e-06 56.2 101 41.6
Actinidia07936 Actinidia chinensis HOM05D001000 ORTHO05D001896 4.1e-06 55.8 62 48.4
Aqoxy4G02690 Aquilegia oxysepala HOM05D001000 ORTHO05D001896 4.1e-06 55.8 63 57.1
MSTRG.27557 Avicennia marina HOM05D001000 ORTHO05D001896 4.1e-06 55.8 81 48.1
Duzib093G1555 Durio zibethinus HOM05D001000 ORTHO05D001896 4.1e-06 55.8 156 35.9
Duzib128G1274 Durio zibethinus HOM05D001000 ORTHO05D001896 4.1e-06 55.8 84 47.6
Glyma.03G200100 Glycine max HOM05D001000 ORTHO05D001896 4.1e-06 55.8 60 53.3
Gohir.A04G061500 Gossypium hirsutum HOM05D001000 ORTHO05D001896 4.1e-06 55.8 84 48.8
TPR.G26283 Trifolium pratense HOM05D001000 ORTHO05D001896 4.1e-06 55.8 131 40.5
Ah.08g210200 Amaranthus hybridus HOM05D001000 ORTHO05D001896 5.4e-06 55.5 61 55.7
FAN09G4292 Fragaria x ananassa HOM05D001000 ORTHO05D001896 5.4e-06 55.5 70 45.7
Prupe.2G071500 Prunus persica HOM05D001000 ORTHO05D001896 5.4e-06 55.5 56 57.1
QL01p011382 Quercus lobata HOM05D001000 ORTHO05D001896 5.4e-06 55.5 74 45.9
QL01p011639 Quercus lobata HOM05D001000 ORTHO05D001896 5.4e-06 55.5 74 45.9
QL93p2014_0028 Quercus lobata HOM05D001000 ORTHO05D001896 5.4e-06 55.5 74 45.9
PGSC0003DMG400007601 Solanum tuberosum HOM05D001000 ORTHO05D001896 5.4e-06 55.5 77 50.6
AT2G36050 Arabidopsis thaliana HOM05D001000 ORTHO05D001896 7.0e-06 55.1 127 34.6
EL10Ac4g08704 Beta vulgaris HOM05D001000 ORTHO05D001896 7.0e-06 55.1 67 47.8
Carub.0004s1779 Capsella rubella HOM05D001000 ORTHO05D001896 7.0e-06 55.1 105 36.2
Carub.0005s1895 Capsella rubella HOM05D001000 ORTHO05D001896 7.0e-06 55.1 100 39.0
Ciclev10012467m.g Citrus clementina HOM05D001000 ORTHO05D001896 7.0e-06 55.1 84 47.6
FvH4_6g19870 Fragaria vesca HOM05D001000 ORTHO05D001896 7.0e-06 55.1 67 47.8
FAN02G4019 Fragaria x ananassa HOM05D001000 ORTHO05D001896 7.0e-06 55.1 69 46.4
FAN14G5247 Fragaria x ananassa HOM05D001000 ORTHO05D001896 7.0e-06 55.1 67 47.8
Gorai.009G398200 Gossypium raimondii HOM05D001000 ORTHO05D001896 7.0e-06 55.1 84 47.6
Thecc.05G100500 Theobroma cacao HOM05D001000 ORTHO05D001896 7.0e-06 55.1 143 37.1
CsaV3_3G037710 Cucumis sativus L. HOM05D001000 ORTHO05D001896 9.1e-06 54.7 82 45.1
HanXRQChr05g0145021 Helianthus annuus HOM05D001000 ORTHO05D001896 9.1e-06 54.7 68 48.5
Lsat_1_v5_gn_9_47200 Lactuca sativa HOM05D001000 ORTHO05D001896 9.1e-06 54.7 58 51.7
Rhsim03G0067300 Rhododendron simsii HOM05D001000 ORTHO05D001896 9.1e-06 54.7 53 52.8
Sopen11g002600 Solanum pennellii HOM05D001000 ORTHO05D001896 9.1e-06 54.7 58 56.9
TWI74G0536 Tripterygium wilfordii HOM05D001000 ORTHO05D001896 9.1e-06 54.7 58 53.4


User provided reference genes

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