Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G837.13 Capsicum annuum HOM05D006971 ORTHO05D009076 5.1e-210 734.2 373 100.0
PGSC0003DMG400019536 Solanum tuberosum HOM05D006971 ORTHO05D009076 9.3e-188 660.2 373 91.2
Nitab4.5_0004704g0010 Nicotiana tabacum HOM05D006971 ORTHO05D009076 4.3e-185 651.4 375 89.1
Sopen03g035080 Solanum pennellii HOM05D006971 ORTHO05D009076 1.8e-183 646.0 375 89.6
Solyc03g116110.3 Solanum lycopersicum HOM05D006971 ORTHO05D009076 2.4e-183 645.6 375 89.6
Nitab4.5_0000842g0110 Nicotiana tabacum HOM05D006971 ORTHO05D009076 5.3e-183 644.4 374 88.2
Dinv38707 Davidia involucrata HOM05D006971 ORTHO05D009076 3.7e-152 542.0 376 74.5
CSS0007636 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.8e-151 539.7 372 74.7
CSS0034788 Camellia sinensis var. sinensis HOM05D006971 ORTHO05D009076 1.8e-151 539.7 372 74.7
Actinidia04895 Actinidia chinensis HOM05D006971 ORTHO05D009076 5.9e-150 534.6 365 75.1
Rhsim08G0155400 Rhododendron simsii HOM05D006971 ORTHO05D009076 8.5e-149 530.8 371 74.1
Peaxi162Scf00274g00071 Petunia axillaris HOM05D006971 ORTHO05D009076 5.5e-148 528.1 299 88.0
CANSAT80G1552 Cannabis sativa HOM05D006971 ORTHO05D009076 1.4e-146 523.5 372 71.0
Ca_21824_v3 Cicer arietinum L. HOM05D006971 ORTHO05D009076 5.2e-146 521.5 362 72.7
Manes.06G092900 Manihot esculenta HOM05D006971 ORTHO05D009076 3.3e-145 518.8 375 69.9
Ciclev10020174m.g Citrus clementina HOM05D006971 ORTHO05D009076 5.7e-145 518.1 375 70.4
Psat4g051280 Pisum sativum HOM05D006971 ORTHO05D009076 7.4e-145 517.7 362 71.8
MD14G1199800 Malus domestica HOM05D006971 ORTHO05D009076 2.2e-144 516.2 376 68.9
Cc04_g16660 Coffea canephora HOM05D006971 ORTHO05D009076 2.8e-144 515.8 379 70.7
Medtr0493s0030 Medicago truncatula HOM05D006971 ORTHO05D009076 2.8e-144 515.8 364 72.0
Lj9A463T31 Lonicera japonica HOM05D006971 ORTHO05D009076 6.3e-144 514.6 311 80.4
Eucgr.B00501 Eucalyptus grandis HOM05D006971 ORTHO05D009076 8.2e-144 514.2 339 73.2
TPR.G9261 Trifolium pratense HOM05D006971 ORTHO05D009076 1.1e-143 513.8 364 71.4
Nn4g23158 Nelumbo nucifera HOM05D006971 ORTHO05D009076 2.4e-143 512.7 373 69.2
CiPaw.11G044200 Carya illinoinensis HOM05D006971 ORTHO05D009076 4.1e-143 511.9 375 69.9
Lj4g0026607 Lotus japonicus HOM05D006971 ORTHO05D009076 4.1e-143 511.9 363 70.2
PGR083G0834 Punica granatum HOM05D006971 ORTHO05D009076 4.1e-143 511.9 375 70.1
RcHm_v2.0_Chr7g0181351 Rosa chinensis HOM05D006971 ORTHO05D009076 4.1e-143 511.9 357 71.7
Prupe.5G193100 Prunus persica HOM05D006971 ORTHO05D009076 5.3e-143 511.5 371 70.4
Lalb_Chr07g0178011 Lupinus albus HOM05D006971 ORTHO05D009076 2.6e-142 509.2 360 71.1
Phvul.003G190500 Phaseolus vulgaris HOM05D006971 ORTHO05D009076 4.5e-142 508.4 369 69.1
Cpa.g.sc111.5 Carica papaya HOM05D006971 ORTHO05D009076 5.9e-142 508.1 374 69.5
QL10p016808 Quercus lobata HOM05D006971 ORTHO05D009076 1.5e-140 503.4 375 68.5
VMungo1215G2247 Vigna mungo HOM05D006971 ORTHO05D009076 1.9e-140 503.1 369 68.3
MELO3C001980.2 Cucumis melo HOM05D006971 ORTHO05D009076 7.2e-140 501.1 376 68.6
CsaV3_1G005470 Cucumis sativus L. HOM05D006971 ORTHO05D009076 7.2e-140 501.1 375 68.3
THA.LOC104808268 Tarenaya hassleriana HOM05D006971 ORTHO05D009076 7.2e-140 501.1 369 68.3
Thecc.03G086400 Theobroma cacao HOM05D006971 ORTHO05D009076 9.4e-140 500.7 377 68.4
FvH4_5g14981 Fragaria vesca HOM05D006971 ORTHO05D009076 1.2e-139 500.4 318 76.7
Oeu006511.1 Olea europaea HOM05D006971 ORTHO05D009076 1.6e-139 500.0 376 68.6
Glyma.17G099600 Glycine max HOM05D006971 ORTHO05D009076 2.1e-139 499.6 369 68.0
FAN18G2929 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.7e-139 499.2 318 76.4
TWI15G1038 Tripterygium wilfordii HOM05D006971 ORTHO05D009076 8.0e-139 497.7 313 75.1
Sed0024719 Sechium edule HOM05D006971 ORTHO05D009076 1.0e-138 497.3 362 69.3
DCAR_016549 Daucus carota HOM05D006971 ORTHO05D009076 1.4e-138 496.9 365 72.1
FAN04G0596 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.4e-138 496.9 420 64.3
Glyma.05G027100 Glycine max HOM05D006971 ORTHO05D009076 3.0e-138 495.7 369 67.8
HanXRQChr05g0158151 Helianthus annuus HOM05D006971 ORTHO05D009076 2.2e-136 489.6 376 69.7
PSO017G5818 Papaver somniferum HOM05D006971 ORTHO05D009076 2.2e-136 489.6 377 66.8
MSTRG.4425 Avicennia marina HOM05D006971 ORTHO05D009076 6.3e-136 488.0 378 67.7
Aa31LG4G4870 Aethionema arabicum HOM05D006971 ORTHO05D009076 1.1e-135 487.3 370 65.4
Aqoxy3G04167 Aquilegia oxysepala HOM05D006971 ORTHO05D009076 1.8e-135 486.5 339 70.5
SalBow7G4263 Salvia bowleyana HOM05D006971 ORTHO05D009076 2.4e-135 486.1 379 67.5
arahy.Tifrunner.gnm1.ann1.QE88UD Arachis hypogaea HOM05D006971 ORTHO05D009076 3.1e-135 485.7 369 66.4
COL.COLO4_28316 Corchorus olitorius HOM05D006971 ORTHO05D009076 4.1e-135 485.3 365 66.8
arahy.Tifrunner.gnm1.ann1.NVD91E Arachis hypogaea HOM05D006971 ORTHO05D009076 1.6e-134 483.4 369 65.9
GSVIVG01008006001 Vitis vinifera HOM05D006971 ORTHO05D009076 2.0e-134 483.0 374 67.9
CARHR067910 Cardamine hirsuta HOM05D006971 ORTHO05D009076 4.5e-134 481.9 310 74.5
AT1G74640 Arabidopsis thaliana HOM05D006971 ORTHO05D009076 1.0e-133 480.7 348 68.7
Carub.0002s2143 Capsella rubella HOM05D006971 ORTHO05D009076 1.7e-133 479.9 371 65.8
ECA246G1831 Erigeron canadensis HOM05D006971 ORTHO05D009076 1.7e-133 479.9 378 66.1
Sp5g29760 Schrenkiella parvula HOM05D006971 ORTHO05D009076 3.8e-133 478.8 344 68.3
Migut.D01821 Erythranthe guttata HOM05D006971 ORTHO05D009076 6.5e-133 478.0 374 67.1
Zm00001eb099580 Zea mays HOM05D006971 ORTHO05D009076 6.5e-133 478.0 312 74.0
FAN13G3185 Fragaria x ananassa HOM05D006971 ORTHO05D009076 1.1e-132 477.2 311 74.3
AL2G34520 Arabidopsis lyrata HOM05D006971 ORTHO05D009076 3.2e-132 475.7 371 66.0
MBI02_g41659_MAGBIO Magnolia biondii HOM05D006971 ORTHO05D009076 1.6e-131 473.4 365 67.1
BraA02t06985Z Brassica rapa HOM05D006971 ORTHO05D009076 2.1e-131 473.0 337 67.7
BcaB05g24862 Brassica carinata HOM05D006971 ORTHO05D009076 2.7e-131 472.6 360 66.1
Ah.02g113480 Amaranthus hybridus HOM05D006971 ORTHO05D009076 3.6e-131 472.2 358 67.3
C02p31990 Brassica napus HOM05D006971 ORTHO05D009076 3.6e-131 472.2 335 68.1
TAR629G1638 Trochodendron aralioides HOM05D006971 ORTHO05D009076 3.6e-131 472.2 282 81.2
A02p19460 Brassica napus HOM05D006971 ORTHO05D009076 8.0e-131 471.1 335 68.1
SGA_v2.0_scaffold114G31906 Striga asiatica HOM05D006971 ORTHO05D009076 1.4e-130 470.3 382 66.0
Potri.017G115100 Populus trichocarpa HOM05D006971 ORTHO05D009076 2.3e-130 469.5 375 62.4
Duzib205G0087 Durio zibethinus HOM05D006971 ORTHO05D009076 3.0e-130 469.2 367 65.7
BcaC03g15516 Brassica carinata HOM05D006971 ORTHO05D009076 4.0e-130 468.8 369 64.2
Sabra17G0095300 Salix brachista HOM05D006971 ORTHO05D009076 5.2e-130 468.4 375 62.7
unitig_60.g25418 Utricularia gibba HOM05D006971 ORTHO05D009076 4.4e-129 465.3 327 70.6
ATR0564G273 Amborella trichopoda HOM05D006971 ORTHO05D009076 7.5e-129 464.5 377 62.3
Gohir.A08G094100 Gossypium hirsutum HOM05D006971 ORTHO05D009076 9.8e-129 464.2 389 62.2
Lsat_1_v5_gn_5_20140 Lactuca sativa HOM05D006971 ORTHO05D009076 1.3e-128 463.8 342 68.7
AUR62008412 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.2e-128 463.0 362 65.5
Gorai.004G112200 Gossypium raimondii HOM05D006971 ORTHO05D009076 4.8e-128 461.8 406 59.6
FAN08G1158 Fragaria x ananassa HOM05D006971 ORTHO05D009076 2.0e-126 456.4 280 79.3
CDE07G1445 Ceratophyllum demersum HOM05D006971 ORTHO05D009076 3.0e-122 442.6 338 62.4
PSO478G0283 Papaver somniferum HOM05D006971 ORTHO05D009076 6.8e-122 441.4 280 75.7
AUR62021684 Chenopodium quinoa HOM05D006971 ORTHO05D009076 2.9e-117 426.0 353 61.5
EL10Ac5g11009 Beta vulgaris HOM05D006971 ORTHO05D009076 4.0e-114 415.6 470 50.6
Cfa018946 Carpinus fangiana HOM05D006971 ORTHO05D009076 1.9e-103 380.2 245 73.9
Hund02652 Selenicereus undatus HOM05D006971 ORTHO05D009076 2.7e-102 376.3 338 57.7
HPP92_002355 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.6e-99 367.1 273 65.6
Pp3c23_920 Physcomitrium patens HOM05D006971 ORTHO05D009076 1.4e-95 354.0 317 54.3
Mapoly0071s0120 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-95 353.6 358 51.1
Mapoly0229s0006 Marchantia polymorpha HOM05D006971 ORTHO05D009076 1.9e-95 353.6 358 51.1
vmacro17544 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 6.6e-93 345.1 206 82.0
Os09g0413700 Oryza sativa ssp. japonica HOM05D006971 ORTHO05D009076 1.1e-92 344.4 233 70.4
Gohir.D08G105301 Gossypium hirsutum HOM05D006971 ORTHO05D009076 2.1e-91 340.1 233 70.8
SMO111G0229 Selaginella moellendorffii HOM05D006971 ORTHO05D009076 6.8e-90 335.1 278 56.8
HPP92_002356 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.0e-85 321.2 252 61.9
HPP92_027581 Vanilla planifolia HOM05D006971 ORTHO05D009076 1.0e-56 224.9 191 56.0
vmacro17545 Vaccinium macrocarpon HOM05D006971 ORTHO05D009076 4.6e-46 189.5 165 63.0
ClCG04G012280 Citrullus lanatus HOM05D006971 ORTHO05D009076 2.2e-43 180.6 171 57.3
Dinv19957 Davidia involucrata HOM05D006971 ORTHO05D009076 4.5e-41 172.9 125 73.6
AagrBONN_evm.TU.Sc2ySwM_368.527 Anthoceros agrestis HOM05D006971 ORTHO05D009076 4.2e-39 166.4 184 44.6
Thhalv10019619m.g Eutrema salsugineum HOM05D006971 ORTHO05D009076 4.1e-34 149.8 133 58.6
BcaB03g13848 Brassica carinata HOM05D006971 ORTHO05D009076 8.8e-29 132.1 150 50.7
Actinidia37630 Actinidia chinensis HOM05D000001 ORTHO05D008780 1.8e-26 124.4 85 75.3
SEGI_28088 Sequoiadendron giganteum HOM05D006971 ORTHO05D009076 1.7e-24 117.9 102 50.0
HPP92_027582 Vanilla planifolia HOM05D006971 ORTHO05D009076 2.4e-18 97.4 135 43.0
MD06G1192800 Malus domestica HOM05D006971 ORTHO05D009076 4.1e-18 96.7 84 58.3
A07p29310 Brassica napus HOM05D006971 ORTHO05D041645 8.6e-08 62.4 48 64.6
BraA07t30570Z Brassica rapa HOM05D006971 ORTHO05D041645 8.6e-08 62.4 48 64.6


User provided reference genes

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