Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G836.73 Capsicum annuum HOM05D037394 ORTHO05D000724 2.1e-121 439.1 232 100.0
PGSC0003DMG400015770 Solanum tuberosum HOM05D000988 ORTHO05D000724 1.3e-54 217.2 237 62.9
CAN.G60.4 Capsicum annuum HOM05D037394 ORTHO05D000724 1.3e-49 200.7 165 70.9
Sopen02g035320 Solanum pennellii HOM05D000988 ORTHO05D000724 1.5e-47 193.7 239 58.2
Solyc02g090680.3 Solanum lycopersicum HOM05D000988 ORTHO05D000724 1.3e-46 190.7 239 56.5
CAN.G25.10 Capsicum annuum HOM05D037394 ORTHO05D000724 4.2e-29 132.5 98 78.6
Nitab4.5_0001034g0100 Nicotiana tabacum HOM05D000988 ORTHO05D000724 1.6e-25 120.6 253 43.1
Peaxi162Scf00450g00739 Petunia axillaris HOM05D000988 ORTHO05D000724 1.3e-22 110.9 219 41.1
CAN.G7.9 Capsicum annuum HOM05D000222 ORTHO05D000329 6.5e-14 82.0 62 77.4
Dinv39865 Davidia involucrata HOM05D000988 ORTHO05D000724 8.5e-14 81.6 218 35.8
CSS0048797 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 3.2e-13 79.7 187 37.4
Migut.K00762 Erythranthe guttata HOM05D000988 ORTHO05D000724 5.5e-13 79.0 217 33.6
COL.COLO4_11396 Corchorus olitorius HOM05D000988 ORTHO05D000724 7.2e-13 78.6 134 41.0
GSVIVG01022145001 Vitis vinifera HOM05D000988 ORTHO05D000724 2.7e-12 76.6 204 35.3
Oeu050777.1 Olea europaea HOM05D000988 ORTHO05D000724 3.6e-12 76.3 243 32.9
Dinv29977 Davidia involucrata HOM05D000988 ORTHO05D000724 4.7e-12 75.9 224 35.7
CSS0047121 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 6.1e-12 75.5 186 36.0
Actinidia36500 Actinidia chinensis HOM05D000988 ORTHO05D000724 6.7e-11 72.0 226 32.7
MSTRG.15394 Avicennia marina HOM05D000988 ORTHO05D000724 6.7e-11 72.0 231 33.3
Cc07_g05910 Coffea canephora HOM05D000988 ORTHO05D000724 1.1e-10 71.2 225 30.2
FAN26G1516 Fragaria x ananassa HOM05D000988 ORTHO05D000724 2.0e-10 70.5 195 32.8
Gohir.D12G088300 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.0e-10 70.5 133 35.3
Gohir.D11G197900 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.6e-10 70.1 222 31.5
Gorai.008G074800 Gossypium raimondii HOM05D000988 ORTHO05D000724 2.6e-10 70.1 171 36.8
QL06p041825 Quercus lobata HOM05D000988 ORTHO05D000724 2.6e-10 70.1 164 35.4
Gohir.A12G070500 Gossypium hirsutum HOM05D000988 ORTHO05D000724 4.4e-10 69.3 171 35.7
Gorai.007G211800 Gossypium raimondii HOM05D000988 ORTHO05D000724 4.4e-10 69.3 223 31.4
FAN23G0955 Fragaria x ananassa HOM05D000988 ORTHO05D000724 5.7e-10 68.9 195 32.3
CiPaw.01G019400 Carya illinoinensis HOM05D000988 ORTHO05D000724 7.4e-10 68.6 141 38.3
Atru.chr3.348 Acer truncatum HOM05D000988 ORTHO05D000724 9.7e-10 68.2 173 32.4
Duzib187G2011 Durio zibethinus HOM05D000988 ORTHO05D000724 9.7e-10 68.2 229 28.8
FvH4_1g15820 Fragaria vesca HOM05D000988 ORTHO05D000724 9.7e-10 68.2 195 32.3
Cpa.g.sc55.167 Carica papaya HOM05D000988 ORTHO05D000724 1.7e-09 67.4 225 31.6
Manes.12G103100 Manihot esculenta HOM05D000988 ORTHO05D000724 1.7e-09 67.4 219 31.5
vmacro05330 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 1.7e-09 67.4 188 31.4
Gohir.A11G191100 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.2e-09 67.0 223 31.8
Nitab4.5_0000033g0440 Nicotiana tabacum HOM05D000988 ORTHO05D000724 2.2e-09 67.0 214 29.4
SalBow5G1305 Salvia bowleyana HOM05D000988 ORTHO05D000724 2.2e-09 67.0 168 33.9
SalBow5G4663 Salvia bowleyana HOM05D000988 ORTHO05D000724 2.2e-09 67.0 168 33.9
TAR376G0444 Trochodendron aralioides HOM05D000988 ORTHO05D000724 2.8e-09 66.6 221 29.4
Cfa004004 Carpinus fangiana HOM05D000988 ORTHO05D000724 3.7e-09 66.2 140 30.7
CiPaw.02G008800 Carya illinoinensis HOM05D000988 ORTHO05D000724 3.7e-09 66.2 140 35.7
FAN28G2662 Fragaria x ananassa HOM05D000988 ORTHO05D000724 3.7e-09 66.2 190 32.1
CSS0017394 Camellia sinensis var. sinensis HOM05D000988 ORTHO05D000724 4.8e-09 65.9 219 32.0
DCAR_025727 Daucus carota HOM05D000988 ORTHO05D000724 4.8e-09 65.9 148 35.1
Nn5g30231 Nelumbo nucifera HOM05D000988 ORTHO05D000724 4.8e-09 65.9 183 31.7
ClCG02G012780 Citrullus lanatus HOM05D000988 ORTHO05D000724 6.3e-09 65.5 184 28.3
Duzib147G1455 Durio zibethinus HOM05D000988 ORTHO05D000724 6.3e-09 65.5 171 35.1
TWI73G0652 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 8.2e-09 65.1 223 30.0
TAR628G0579 Trochodendron aralioides HOM05D000988 ORTHO05D000724 8.2e-09 65.1 185 32.4
TAR625G0816 Trochodendron aralioides HOM05D000988 ORTHO05D000724 1.1e-08 64.7 218 30.3
VMungo0251G3785 Vigna mungo HOM05D000988 ORTHO05D000724 1.4e-08 64.3 191 31.9
Manes.13G127100 Manihot esculenta HOM05D000988 ORTHO05D000724 1.8e-08 63.9 193 34.7
Peaxi162Scf00685g00069 Petunia axillaris HOM05D000988 ORTHO05D000724 1.8e-08 63.9 171 31.6
MSTRG.23759 Avicennia marina HOM05D000988 ORTHO05D000724 3.1e-08 63.2 226 29.2
Thecc.01G054100 Theobroma cacao HOM05D000988 ORTHO05D000724 3.1e-08 63.2 181 33.1
MSTRG.2889 Avicennia marina HOM05D000988 ORTHO05D000724 4.1e-08 62.8 116 32.8
Sabra09G0079300 Salix brachista HOM05D000988 ORTHO05D000724 4.1e-08 62.8 233 28.8
MBI02_g17335_MAGBIO Magnolia biondii HOM05D000988 ORTHO05D000724 5.3e-08 62.4 118 37.3
Ciclev10026517m.g Citrus clementina HOM05D000988 ORTHO05D000724 7.0e-08 62.0 197 29.9
MSTRG.3421 Avicennia marina HOM05D000988 ORTHO05D000724 9.1e-08 61.6 230 30.0
CARHR160140 Cardamine hirsuta HOM05D010645 ORTHO05D000724 9.1e-08 61.6 197 28.9
Phvul.003G244700 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 9.1e-08 61.6 191 30.9
BcaC06g33088 Brassica carinata HOM05D010645 ORTHO05D000724 1.2e-07 61.2 241 30.7
Gohir.D10G096200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 1.2e-07 61.2 125 35.2
Gorai.011G105400 Gossypium raimondii HOM05D000988 ORTHO05D000724 1.2e-07 61.2 125 35.2
Hma1.2p1_0370F.1_g137940 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 1.2e-07 61.2 234 28.6
FAN19G1762 Fragaria x ananassa HOM05D000988 ORTHO05D000724 1.5e-07 60.8 231 30.3
Oeu004831.1 Olea europaea HOM05D000988 ORTHO05D000724 1.5e-07 60.8 244 28.7
Gohir.A10G092200 Gossypium hirsutum HOM05D000988 ORTHO05D000724 2.0e-07 60.5 135 34.1
Sed0015277 Sechium edule HOM05D000988 ORTHO05D000724 2.6e-07 60.1 192 26.6
A03p47840 Brassica napus HOM05D010645 ORTHO05D000724 3.4e-07 59.7 238 28.6
BraA03t13894Z Brassica rapa HOM05D010645 ORTHO05D000724 3.4e-07 59.7 238 29.0
Migut.H00444 Erythranthe guttata HOM05D000988 ORTHO05D000724 4.5e-07 59.3 178 29.8
Nitab4.5_0001064g0030 Nicotiana tabacum HOM05D000988 ORTHO05D000724 5.9e-07 58.9 219 29.2
Sc03g0001510 Simmondsia chinensis HOM05D000988 ORTHO05D000724 7.7e-07 58.5 236 28.0
CANSAT01G1117 Cannabis sativa HOM05D000988 ORTHO05D000724 1.0e-06 58.2 161 29.8
Phvul.002G019500 Phaseolus vulgaris HOM05D000988 ORTHO05D000724 1.0e-06 58.2 185 29.7
RcHm_v2.0_Chr2g0105111 Rosa chinensis HOM05D000988 ORTHO05D000724 1.0e-06 58.2 247 28.3
SGA_v2.0_scaffold204G41577 Striga asiatica HOM05D000988 ORTHO05D000724 1.3e-06 57.8 219 30.6
THA.LOC104826988 Tarenaya hassleriana HOM05D010645 ORTHO05D000724 1.3e-06 57.8 236 26.3
Actinidia16502 Actinidia chinensis HOM05D000988 ORTHO05D000724 1.7e-06 57.4 166 36.1
THA.LOC104819843 Tarenaya hassleriana HOM05D000988 ORTHO05D000724 1.7e-06 57.4 173 30.1
Psat4g087120 Pisum sativum HOM05D000988 ORTHO05D000724 2.2e-06 57.0 135 32.6
vmacro02192 Vaccinium macrocarpon HOM05D010265 ORTHO05D009356 2.2e-06 57.0 176 28.4
Hma1.2p1_0461F.1_g157920 Hydrangea macrophylla HOM05D000988 ORTHO05D000724 2.9e-06 56.6 219 27.4
TWI09G0765 Tripterygium wilfordii HOM05D000988 ORTHO05D000724 2.9e-06 56.6 229 28.8
VMungo1215G1251 Vigna mungo HOM05D000988 ORTHO05D000724 2.9e-06 56.6 140 32.1
Aa31LG7G13560 Aethionema arabicum HOM05D000988 ORTHO05D000724 3.8e-06 56.2 179 27.9
TAR381G0922 Trochodendron aralioides HOM05D000988 ORTHO05D000724 3.8e-06 56.2 223 30.0
Actinidia00450 Actinidia chinensis HOM05D000988 ORTHO05D000724 5.0e-06 55.8 222 27.9
EL10Ac6g15762 Beta vulgaris HOM05D000988 ORTHO05D000724 5.0e-06 55.8 135 31.1
Carub.0004s0263 Capsella rubella HOM05D000988 ORTHO05D000724 5.0e-06 55.8 86 33.7
Nitab4.5_0000310g0060 Nicotiana tabacum HOM05D000988 ORTHO05D000724 5.0e-06 55.8 117 49.6
Psat2g166040 Pisum sativum HOM05D000988 ORTHO05D000724 5.0e-06 55.8 183 30.6
AUR62003862 Chenopodium quinoa HOM05D000988 ORTHO05D000724 6.5e-06 55.5 86 33.7
Potri.009G103600 Populus trichocarpa HOM05D000988 ORTHO05D000724 6.5e-06 55.5 225 27.6
GSVIVG01031765001 Vitis vinifera HOM05D000988 ORTHO05D000724 6.5e-06 55.5 217 27.2
Thhalv10000332m.g Eutrema salsugineum HOM05D000988 ORTHO05D000724 8.5e-06 55.1 80 37.5
vmacro17945 Vaccinium macrocarpon HOM05D000988 ORTHO05D000724 8.5e-06 55.1 189 34.9


User provided reference genes

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