Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G836.50 Capsicum annuum HOM05D008741 ORTHO05D010787 2.5e-118 428.7 205 100.0
CAN.G546.55 Capsicum annuum HOM05D008741 ORTHO05D010787 3.1e-100 368.6 190 93.7
CAN.G126.3 Capsicum annuum HOM05D008741 ORTHO05D010787 1.8e-79 299.7 151 94.0
CAN.G183.6 Capsicum annuum HOM05D008741 ORTHO05D010787 7.4e-78 294.3 153 92.8
CAN.G303.25 Capsicum annuum HOM05D008741 ORTHO05D010787 1.5e-59 233.4 201 62.2
CAN.G108.14 Capsicum annuum HOM05D008741 ORTHO05D010787 3.8e-50 202.2 154 68.2
CAN.G475.19 Capsicum annuum HOM05D008741 ORTHO05D010787 4.1e-44 182.2 101 89.1
CAN.G440.2 Capsicum annuum HOM05D008741 ORTHO05D010787 5.7e-38 161.8 150 60.0
PGSC0003DMG400034382 Solanum tuberosum HOM05D008741 ORTHO05D010787 8.8e-31 137.9 157 46.5
PGSC0003DMG400034876 Solanum tuberosum HOM05D008741 ORTHO05D010787 8.8e-31 137.9 157 46.5
PGSC0003DMG400039980 Solanum tuberosum HOM05D008741 ORTHO05D010787 8.8e-31 137.9 157 46.5
PGSC0003DMG400046449 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.4e-30 135.6 157 45.9
PGSC0003DMG400046857 Solanum tuberosum HOM05D008741 ORTHO05D010787 7.7e-27 124.8 130 50.0
CAN.G2150.1 Capsicum annuum HOM05D000550 ORTHO05D000400 2.2e-26 123.2 113 61.9
PGSC0003DMG400043531 Solanum tuberosum HOM05D008741 ORTHO05D010787 3.2e-25 119.4 141 45.4
PGSC0003DMG400023197 Solanum tuberosum HOM05D008741 ORTHO05D010787 9.4e-25 117.9 116 50.9
Peaxi162Scf00429g00041 Petunia axillaris HOM05D008741 ORTHO05D010787 1.4e-23 114.0 186 36.0
Peaxi162Scf00072g00004 Petunia axillaris HOM05D008741 ORTHO05D010787 4.0e-23 112.5 187 36.9
CAN.G264.12 Capsicum annuum HOM05D008741 ORTHO05D010787 1.7e-21 107.1 140 51.4
PGSC0003DMG400007751 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.4e-20 104.0 134 43.3
CAN.G1131.36 Capsicum annuum HOM05D008741 ORTHO05D010787 1.8e-20 103.6 128 43.8
CAN.G198.29 Capsicum annuum HOM05D008741 ORTHO05D010787 3.1e-20 102.8 145 37.9
PGSC0003DMG400044755 Solanum tuberosum HOM05D008741 ORTHO05D010787 3.5e-19 99.4 112 43.8
PGSC0003DMG400035740 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.3e-18 97.4 122 44.3
PGSC0003DMG400035832 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.3e-18 97.4 92 46.7
CAN.G433.7 Capsicum annuum HOM05D008741 ORTHO05D010787 2.9e-18 96.3 130 36.2
PGSC0003DMG400017162 Solanum tuberosum HOM05D008741 ORTHO05D010787 3.8e-18 95.9 91 46.2
CAN.G165.9 Capsicum annuum HOM05D008741 ORTHO05D010787 8.6e-18 94.7 130 37.7
CAN.G1512.5 Capsicum annuum HOM05D008741 ORTHO05D010787 1.1e-17 94.4 130 35.4
PGSC0003DMG400038446 Solanum tuberosum HOM05D008741 ORTHO05D010787 1.1e-17 94.4 92 46.7
CAN.G78.19 Capsicum annuum HOM05D008741 ORTHO05D010787 1.9e-17 93.6 130 36.9
PGSC0003DMG400012467 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.2e-17 92.4 158 34.8
PGSC0003DMG400039121 Solanum tuberosum HOM05D008741 ORTHO05D010787 5.5e-17 92.0 160 35.6
CAN.G1093.2 Capsicum annuum HOM05D008741 ORTHO05D010787 9.5e-17 91.3 172 33.1
Nitab4.5_0001172g0140 Nicotiana tabacum HOM05D008741 ORTHO05D010787 2.1e-16 90.1 103 42.7
PGSC0003DMG400043513 Solanum tuberosum HOM05D008741 ORTHO05D010787 2.8e-16 89.7 161 33.5
Sopen12g021570 Solanum pennellii HOM05D000047 ORTHO05D000589 2.3e-15 86.7 73 50.7
PGSC0003DMG400012935 Solanum tuberosum HOM05D008741 ORTHO05D010787 4.9e-13 79.0 79 46.8
Sopen04g015170 Solanum pennellii HOM05D008741 ORTHO05D010787 8.3e-13 78.2 173 30.6
CAN.G170.115 Capsicum annuum HOM05D008741 ORTHO05D010787 2.7e-11 73.2 93 45.2
PGSC0003DMG400043422 Solanum tuberosum HOM05D008741 ORTHO05D010787 7.8e-11 71.6 161 32.9
CANSAT56G3744 Cannabis sativa HOM05D001383 ORTHO05D000309 5.0e-10 68.9 103 38.8
CANSAT80G1681 Cannabis sativa HOM05D001383 ORTHO05D000309 5.0e-10 68.9 103 38.8
SGA_v2.0_scaffold1G00312 Striga asiatica HOM05D001383 ORTHO05D000309 7.3e-09 65.1 77 41.6
SGA_v2.0_scaffold309G48181 Striga asiatica HOM05D001383 ORTHO05D000309 9.5e-09 64.7 77 41.6
SGA_v2.0_scaffold55G19721 Striga asiatica HOM05D001383 ORTHO05D000309 9.5e-09 64.7 77 41.6
Prupe.8G093700 Prunus persica HOM05D001383 ORTHO05D000309 1.2e-08 64.3 65 47.7
SGA_v2.0_scaffold18G08221 Striga asiatica HOM05D012189 ORTHO05D000309 1.6e-08 63.9 97 37.1
SGA_v2.0_scaffold88G27215 Striga asiatica HOM05D001383 ORTHO05D000309 2.1e-08 63.5 98 37.8
SGA_v2.0_scaffold5G03007 Striga asiatica HOM05D001383 ORTHO05D000309 2.8e-08 63.2 77 40.3
Hma1.2p1_2779F.1_g328290 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.6e-08 62.8 70 44.3
Hma1.2p1_1389F.1_g280030 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.7e-08 62.4 64 48.4
SGA_v2.0_scaffold17G08080 Striga asiatica HOM05D001383 ORTHO05D000309 4.7e-08 62.4 59 49.2
Migut.M00684 Erythranthe guttata HOM05D001383 ORTHO05D000309 6.1e-08 62.0 68 45.6
Hma1.2p1_0211F.1_g089820 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.4e-07 60.8 64 46.9
Hma1.2p1_0071F.1_g038200 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.0e-07 59.7 71 43.7
Hma1.2p1_2569F.1_g324543 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.0e-07 59.7 60 46.7
EL10Ac7g16399 Beta vulgaris HOM05D008388 ORTHO05D000309 4.0e-07 59.3 75 38.7
Hma1.2p1_0048F.1_g028060 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 4.0e-07 59.3 56 51.8
DCAR_029331 Daucus carota HOM05D001383 ORTHO05D000309 5.2e-07 58.9 62 43.5
Hma1.2p1_0224F.1_g094550 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 6.8e-07 58.5 63 42.9
Oeu043460.1 Olea europaea HOM05D001383 ORTHO05D000309 8.9e-07 58.2 71 42.3
DCAR_000974 Daucus carota HOM05D001383 ORTHO05D000309 1.2e-06 57.8 67 41.8
Hma1.2p1_1407F.1_g281470 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 1.2e-06 57.8 64 42.2
Atru.chr9.1876 Acer truncatum HOM05D001383 ORTHO05D000309 1.5e-06 57.4 104 33.7
EL10As8g23853 Beta vulgaris HOM05D008388 ORTHO05D000309 1.5e-06 57.4 75 38.7
Sopen01g016950 Solanum pennellii HOM05D008741 ORTHO05D037680 2.6e-06 56.6 42 59.5
Hma1.2p1_0512F.1_g169330 Hydrangea macrophylla HOM05D001383 ORTHO05D000309 3.4e-06 56.2 63 46.0
Oeu006956.1 Olea europaea HOM05D001383 ORTHO05D000309 3.4e-06 56.2 71 42.3
Oeu045500.1 Olea europaea HOM05D001383 ORTHO05D000309 3.4e-06 56.2 71 43.7
SGA_v2.0_scaffold333G49004 Striga asiatica HOM05D001383 ORTHO05D000309 3.4e-06 56.2 54 48.1
DCAR_015227 Daucus carota HOM05D001383 ORTHO05D000309 4.4e-06 55.8 89 37.1
Oeu031331.1 Olea europaea HOM05D001383 ORTHO05D000309 4.4e-06 55.8 71 42.3
Prupe.7G055500 Prunus persica HOM05D001383 ORTHO05D000309 4.4e-06 55.8 64 43.8
Solyc08g150122.1 Solanum lycopersicum HOM05D008741 ORTHO05D010787 4.4e-06 55.8 70 42.9
EL10Ac2g03965 Beta vulgaris HOM05D008388 ORTHO05D000309 5.7e-06 55.5 75 37.3
DCAR_001866 Daucus carota HOM05D001383 ORTHO05D000309 5.7e-06 55.5 91 31.9
DCAR_006044 Daucus carota HOM05D001383 ORTHO05D000309 5.7e-06 55.5 91 31.9
Migut.E00885 Erythranthe guttata HOM05D001383 ORTHO05D000309 7.5e-06 55.1 67 40.3
Peaxi162Scf00039g00218 Petunia axillaris HOM05D022774 ORTHO05D000309 9.8e-06 54.7 56 44.6


User provided reference genes

Program Settings