Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 4.9e-40 167.9 126 100.0
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 3.1e-34 148.7 132 89.4
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 6.8e-34 147.5 125 93.6
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 3.4e-33 145.2 132 88.6
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.2e-32 142.5 132 86.4
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 6.4e-32 141.0 132 81.1
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 1.7e-29 132.9 126 81.0
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.4e-26 123.2 132 73.5
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 1.4e-23 113.2 132 71.2
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 7.1e-23 110.9 121 73.6
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.3e-23 110.5 125 76.0
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 9.3e-23 110.5 125 76.0
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 2.1e-22 109.4 122 77.0
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 4.6e-22 108.2 123 74.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 7.8e-22 107.5 119 74.8
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 3.0e-21 105.5 123 71.5
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 5.1e-21 104.8 122 66.4
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 5.1e-21 104.8 127 75.6
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 6.6e-21 104.4 126 63.5
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 6.6e-21 104.4 126 73.0
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.9e-20 102.8 126 65.1
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 2.5e-20 102.4 128 69.5
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 3.3e-20 102.1 120 75.0
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 4.3e-20 101.7 119 68.1
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 4.3e-20 101.7 133 72.9
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 4.3e-20 101.7 132 70.5
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 5.6e-20 101.3 132 70.5
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 9.6e-20 100.5 124 72.6
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 1.3e-19 100.1 122 68.9
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.6e-19 99.8 133 70.7
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 1.6e-19 99.8 124 71.8
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 2.1e-19 99.4 127 71.7
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.1e-19 99.4 128 69.5
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.1e-19 99.4 128 69.5
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 2.8e-19 99.0 123 74.8
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 2.8e-19 99.0 132 69.7
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 4.8e-19 98.2 124 67.7
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 1.8e-18 96.3 121 74.4
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.8e-18 96.3 121 74.4
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 1.8e-18 96.3 126 65.1
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 2.4e-18 95.9 121 71.9
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 2.4e-18 95.9 127 75.6
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 2.4e-18 95.9 122 59.8
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 3.1e-18 95.5 128 68.8
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 3.1e-18 95.5 127 70.9
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 6.9e-18 94.4 132 66.7
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 6.9e-18 94.4 132 67.4
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 9.0e-18 94.0 126 71.4
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 1.2e-17 93.6 128 71.1
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.5e-17 93.2 121 71.1
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 1.5e-17 93.2 122 66.4
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 2.6e-17 92.4 121 73.6
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 2.6e-17 92.4 121 73.6
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 2.6e-17 92.4 121 73.6
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 2.6e-17 92.4 125 64.0
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 3.4e-17 92.0 121 72.7
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 3.4e-17 92.0 132 66.7
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.4e-17 91.7 121 68.6
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 4.4e-17 91.7 127 71.7
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 4.4e-17 91.7 125 72.0
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 5.8e-17 91.3 127 71.7
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 5.8e-17 91.3 121 72.7
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 5.8e-17 91.3 117 64.1
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 9.9e-17 90.5 118 68.6
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 2.2e-16 89.4 123 69.1
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 3.8e-16 88.6 124 69.4
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 4.9e-16 88.2 122 69.7
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 8.4e-16 87.4 114 67.5
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 8.4e-16 87.4 118 71.2
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 8.4e-16 87.4 178 51.7
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 8.4e-16 87.4 129 65.9
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 1.4e-15 86.7 121 64.5
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.4e-15 86.7 122 64.8
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.4e-15 86.7 122 64.8
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.9e-15 86.3 129 65.9
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 2.4e-15 85.9 118 56.8
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 4.2e-15 85.1 128 65.6
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 4.2e-15 85.1 122 63.9
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 9.3e-15 84.0 126 68.3
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 9.3e-15 84.0 103 78.6
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 1.2e-14 83.6 125 55.2
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 2.1e-14 82.8 126 68.3
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 2.1e-14 82.8 117 49.6
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.7e-14 82.4 132 63.6
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.7e-14 82.4 132 63.6
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 3.5e-14 82.0 101 72.3
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 4.6e-14 81.6 125 62.4
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.0e-13 80.5 128 64.1
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 1.3e-13 80.1 127 64.6
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 3.0e-13 79.0 132 62.9
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.1e-12 77.0 122 64.8
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 3.3e-12 75.5 121 67.8
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 9.6e-12 73.9 110 66.4
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.6e-11 73.2 97 70.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 2.1e-11 72.8 132 62.1
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 1.4e-10 70.1 126 50.0
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 5.3e-10 68.2 116 62.1
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 1.2e-09 67.0 128 61.7
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 2.0e-09 66.2 119 52.9
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 2.4e-07 59.3 119 55.5
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 3.5e-06 55.5 36 75.0


User provided reference genes

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