Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G825.4 Capsicum annuum HOM05D000198 ORTHO05D115010 1.9e-66 255.8 133 100.0
ECA234G3205 Erigeron canadensis HOM05D000198 ORTHO05D005959 2.8e-09 65.9 42 78.6
HanXRQChr10g0312481 Helianthus annuus HOM05D000198 ORTHO05D005959 2.8e-09 65.9 42 78.6
Lsat_1_v5_gn_5_136600 Lactuca sativa HOM05D000198 ORTHO05D005959 2.8e-09 65.9 42 78.6
Lj6g0012993 Lotus japonicus HOM05D000198 ORTHO05D005959 2.8e-09 65.9 102 44.1
Peaxi162Scf00038g02031 Petunia axillaris HOM05D000198 ORTHO05D005959 3.6e-09 65.5 42 76.2
Dinv20419 Davidia involucrata HOM05D000198 ORTHO05D005959 4.7e-09 65.1 42 78.6
Sc12g0010670 Simmondsia chinensis HOM05D000198 ORTHO05D005959 6.1e-09 64.7 42 78.6
VMungo1309G2902 Vigna mungo HOM05D000198 ORTHO05D005959 8.0e-09 64.3 42 76.2
Ciclev10025411m.g Citrus clementina HOM05D000198 ORTHO05D005959 1.4e-08 63.5 42 76.2
Eucgr.F04402 Eucalyptus grandis HOM05D000198 ORTHO05D005959 1.4e-08 63.5 42 76.2
Manes.11G017900 Manihot esculenta HOM05D000198 ORTHO05D005959 1.4e-08 63.5 42 73.8
Manes.11G018400 Manihot esculenta HOM05D000198 ORTHO05D005959 1.4e-08 63.5 42 73.8
Cc00_g19070 Coffea canephora HOM05D000198 ORTHO05D005959 1.8e-08 63.2 42 76.2
Manes.11G017800 Manihot esculenta HOM05D000198 ORTHO05D005959 1.8e-08 63.2 42 73.8
Nn8g38614 Nelumbo nucifera HOM05D000198 ORTHO05D005959 1.8e-08 63.2 42 76.2
Potri.003G067700 Populus trichocarpa HOM05D000198 ORTHO05D005959 1.8e-08 63.2 42 73.8
DCAR_022687 Daucus carota HOM05D000198 ORTHO05D005959 2.3e-08 62.8 71 50.7
GSVIVG01015062001 Vitis vinifera HOM05D000198 ORTHO05D005959 2.3e-08 62.8 44 68.2
Oeu057874.2 Olea europaea HOM05D000198 ORTHO05D005959 3.1e-08 62.4 66 50.0
Glyma.15G178400 Glycine max HOM05D000198 ORTHO05D005959 4.0e-08 62.0 42 73.8
Lj5C35T2 Lonicera japonica HOM05D000198 ORTHO05D005959 4.0e-08 62.0 39 79.5
Sabra03G0039600 Salix brachista HOM05D000198 ORTHO05D005959 4.0e-08 62.0 41 75.6
EL10Ac7g16425 Beta vulgaris HOM05D000198 ORTHO05D005959 5.2e-08 61.6 42 73.8
CSS0046920 Camellia sinensis var. sinensis HOM05D000198 ORTHO05D005959 5.2e-08 61.6 42 73.8
Cfa002976 Carpinus fangiana HOM05D000198 ORTHO05D005959 5.2e-08 61.6 41 75.6
Haze_26026 Corylus avellana HOM05D000198 ORTHO05D005959 5.2e-08 61.6 41 75.6
Glyma.09G070300 Glycine max HOM05D000198 ORTHO05D005959 5.2e-08 61.6 42 73.8
Manes.04G146300 Manihot esculenta HOM05D000198 ORTHO05D005959 5.2e-08 61.6 42 73.8
Potri.001G167100 Populus trichocarpa HOM05D000198 ORTHO05D005959 5.2e-08 61.6 42 73.8
Prupe.7G196700 Prunus persica HOM05D000198 ORTHO05D005959 5.2e-08 61.6 47 66.0
QL11p001049 Quercus lobata HOM05D000198 ORTHO05D005959 5.2e-08 61.6 41 75.6
Actinidia24721 Actinidia chinensis HOM05D000198 ORTHO05D005959 6.8e-08 61.2 39 76.9
MSTRG.9524 Avicennia marina HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 69.0
Gohir.A06G144000 Gossypium hirsutum HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 71.4
Gohir.D06G149800 Gossypium hirsutum HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 71.4
Gorai.010G174800 Gossypium raimondii HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 71.4
Lalb_Chr11g0074241 Lupinus albus HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 73.8
MBI13_g35420_MAGBIO Magnolia biondii HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 73.8
Phvul.009G226700 Phaseolus vulgaris HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 73.8
Thecc.06G122600 Theobroma cacao HOM05D000198 ORTHO05D005959 6.8e-08 61.2 42 71.4
vmacro22030 Vaccinium macrocarpon HOM05D000198 ORTHO05D005959 6.8e-08 61.2 39 76.9
Ah.08g216940 Amaranthus hybridus HOM05D000198 ORTHO05D005959 8.9e-08 60.8 44 68.2
Duzib235G0296 Durio zibethinus HOM05D000198 ORTHO05D005959 8.9e-08 60.8 42 71.4
MD02G1094300 Malus domestica HOM05D000198 ORTHO05D005959 8.9e-08 60.8 42 71.4
MD15G1219200 Malus domestica HOM05D000198 ORTHO05D005959 8.9e-08 60.8 42 71.4
Os09g0440300 Oryza sativa ssp. japonica HOM05D000198 ORTHO05D005959 8.9e-08 60.8 47 66.0
TWI14G1137 Tripterygium wilfordii HOM05D000198 ORTHO05D005959 8.9e-08 60.8 42 73.8
Atru.chr1.4039 Acer truncatum HOM05D000198 ORTHO05D005959 1.2e-07 60.5 66 51.5
CAN.G862.50 Capsicum annuum HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 71.4
CiPaw.03G204900 Carya illinoinensis HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 71.4
Dinv37857 Davidia involucrata HOM05D000198 ORTHO05D005959 1.2e-07 60.5 39 79.5
Hma1.2p1_0291F.1_g114920 Hydrangea macrophylla HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 73.8
Nitab4.5_0002898g0050 Nicotiana tabacum HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 71.4
Nitab4.5_0005225g0020 Nicotiana tabacum HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 71.4
Solyc03g122310.4 Solanum lycopersicum HOM05D000198 ORTHO05D005959 1.2e-07 60.5 42 69.0
Aqoxy7G01026 Aquilegia oxysepala HOM05D000198 ORTHO05D005959 1.5e-07 60.1 42 71.4
Duzib192G0568 Durio zibethinus HOM05D000198 ORTHO05D005959 1.5e-07 60.1 42 71.4
Migut.D00933 Erythranthe guttata HOM05D000198 ORTHO05D005959 1.5e-07 60.1 44 65.9
Lalb_Chr11g0074221 Lupinus albus HOM05D000198 ORTHO05D005959 1.5e-07 60.1 42 71.4
Rhsim12G0210700 Rhododendron simsii HOM05D000198 ORTHO05D005959 1.5e-07 60.1 39 76.9
Rhsim12G0211100 Rhododendron simsii HOM05D000198 ORTHO05D005959 1.5e-07 60.1 39 76.9
PGSC0003DMG400022885 Solanum tuberosum HOM05D000198 ORTHO05D005959 1.5e-07 60.1 42 69.0
Zm00001eb100180 Zea mays HOM05D000198 ORTHO05D005959 1.5e-07 60.1 42 71.4
AUR62001464 Chenopodium quinoa HOM05D000198 ORTHO05D005959 2.0e-07 59.7 42 71.4
AUR62009904 Chenopodium quinoa HOM05D000198 ORTHO05D005959 2.0e-07 59.7 42 71.4
COL.COLO4_30736 Corchorus olitorius HOM05D000198 ORTHO05D005959 2.0e-07 59.7 42 69.0
Hund18683 Selenicereus undatus HOM05D000198 ORTHO05D005959 2.0e-07 59.7 42 71.4
HPP92_011368 Vanilla planifolia HOM05D000198 ORTHO05D005959 2.0e-07 59.7 42 71.4
ATR0598G121 Amborella trichopoda HOM05D000198 ORTHO05D005959 2.6e-07 59.3 42 69.0
MELO3C024345.2 Cucumis melo HOM05D000198 ORTHO05D005959 2.6e-07 59.3 42 69.0
CsaV3_7G034360 Cucumis sativus L. HOM05D000198 ORTHO05D005959 2.6e-07 59.3 42 69.0
Sabra01G0126300 Salix brachista HOM05D000198 ORTHO05D005959 2.6e-07 59.3 39 76.9
CANSAT56G2536 Cannabis sativa HOM05D000198 ORTHO05D005959 3.4e-07 58.9 47 59.6
Cpa.g.sc25.134 Carica papaya HOM05D000198 ORTHO05D005959 3.4e-07 58.9 42 71.4
Ca_02187_v3 Cicer arietinum L. HOM05D000198 ORTHO05D005959 3.4e-07 58.9 47 61.7
ClCG09G001060 Citrullus lanatus HOM05D000198 ORTHO05D005959 3.4e-07 58.9 42 71.4
COL.COLO4_18083 Corchorus olitorius HOM05D000198 ORTHO05D005959 4.4e-07 58.5 42 66.7
FvH4_1g08890 Fragaria vesca HOM05D000198 ORTHO05D005959 4.4e-07 58.5 42 66.7
PGR119G2520 Punica granatum HOM05D000198 ORTHO05D005959 4.4e-07 58.5 42 71.4
Sopen03g041040 Solanum pennellii HOM05D000198 ORTHO05D005959 4.4e-07 58.5 42 66.7
Zm00001eb085560 Zea mays HOM05D000198 ORTHO05D005959 4.4e-07 58.5 53 58.5
Migut.I01090 Erythranthe guttata HOM05D000198 ORTHO05D005959 5.8e-07 58.2 42 66.7
FAN19G1784 Fragaria x ananassa HOM05D000198 ORTHO05D005959 5.8e-07 58.2 41 70.7
SalBow6G2826 Salvia bowleyana HOM05D000198 ORTHO05D005959 5.8e-07 58.2 42 69.0
SalBow6G5793 Salvia bowleyana HOM05D000198 ORTHO05D005959 5.8e-07 58.2 42 69.0
TAR626G0433 Trochodendron aralioides HOM05D000198 ORTHO05D005959 5.8e-07 58.2 39 76.9
FAN03G0818 Fragaria x ananassa HOM05D000198 ORTHO05D005959 7.5e-07 57.8 41 68.3
FAN23G1242 Fragaria x ananassa HOM05D000198 ORTHO05D005959 7.5e-07 57.8 41 70.7
FAN26G1556 Fragaria x ananassa HOM05D000198 ORTHO05D005959 7.5e-07 57.8 41 68.3
FAN26G2953 Fragaria x ananassa HOM05D000198 ORTHO05D005959 7.5e-07 57.8 41 68.3
FAN28G1454 Fragaria x ananassa HOM05D000198 ORTHO05D005959 7.5e-07 57.8 41 68.3
Medtr2g042330 Medicago truncatula HOM05D000198 ORTHO05D005959 7.5e-07 57.8 42 69.0
Pp3c2_8090 Physcomitrium patens HOM05D000198 ORTHO05D005959 7.5e-07 57.8 47 55.3
Pp3c2_8099 Physcomitrium patens HOM05D000198 ORTHO05D005959 7.5e-07 57.8 47 55.3
unitig_748.g7471 Utricularia gibba HOM05D000198 ORTHO05D005959 1.7e-06 56.6 42 64.3
SEGI_07673 Sequoiadendron giganteum HOM05D000198 ORTHO05D005959 2.2e-06 56.2 101 40.6
THA.LOC104815620 Tarenaya hassleriana HOM05D000198 ORTHO05D005959 2.2e-06 56.2 42 64.3
PSO104G0161 Papaver somniferum HOM05D000198 ORTHO05D005959 2.9e-06 55.8 42 66.7
PSO421G0556 Papaver somniferum HOM05D000198 ORTHO05D005959 2.9e-06 55.8 42 66.7
AL1G62810 Arabidopsis lyrata HOM05D000198 ORTHO05D005959 3.7e-06 55.5 42 61.9
CDE05G2779 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 3.7e-06 55.5 42 64.3
Psat1g134760 Pisum sativum HOM05D000198 ORTHO05D005959 4.9e-06 55.1 42 66.7
arahy.Tifrunner.gnm1.ann1.159H25 Arachis hypogaea HOM05D000198 ORTHO05D005959 6.4e-06 54.7 61 50.8
arahy.Tifrunner.gnm1.ann1.XD58IC Arachis hypogaea HOM05D000198 ORTHO05D005959 6.4e-06 54.7 61 50.8
RcHm_v2.0_Chr2g0095351 Rosa chinensis HOM05D000198 ORTHO05D005959 6.4e-06 54.7 42 61.9
CDE11G1141 Ceratophyllum demersum HOM05D000198 ORTHO05D005959 8.3e-06 54.3 42 61.9


User provided reference genes

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