Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G820.5 Capsicum annuum HOM05D000007 ORTHO05D000017 7.2e-46 186.8 89 100.0
Peaxi162Scf00047g00814 Petunia axillaris HOM05D000007 ORTHO05D000017 1.3e-23 112.8 93 58.1
Sopen01g028740 Solanum pennellii HOM05D000007 ORTHO05D000017 1.7e-23 112.5 93 61.3
PGSC0003DMG400022664 Solanum tuberosum HOM05D000007 ORTHO05D000017 3.8e-23 111.3 93 59.1
Solyc01g067030.2 Solanum lycopersicum HOM05D000007 ORTHO05D000017 1.1e-22 109.8 93 61.3
Nitab4.5_0000273g0160 Nicotiana tabacum HOM05D000007 ORTHO05D000017 8.0e-13 77.0 66 53.0
Nitab4.5_0000273g0170 Nicotiana tabacum HOM05D000007 ORTHO05D000017 9.8e-11 70.1 53 58.5
PGSC0003DMG400029654 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.8e-11 70.1 88 42.0
Lsat_1_v5_gn_6_61500 Lactuca sativa HOM05D000007 ORTHO05D000017 1.4e-09 66.2 66 45.5
HanXRQChr07g0185881 Helianthus annuus HOM05D000007 ORTHO05D000017 4.1e-09 64.7 68 44.1
Peaxi162Scf01604g00123 Petunia axillaris HOM05D000007 ORTHO05D000017 4.1e-09 64.7 70 41.4
Cc03_g07530 Coffea canephora HOM05D000007 ORTHO05D000017 1.2e-08 63.2 91 41.8
Lj3P553T4 Lonicera japonica HOM05D000007 ORTHO05D000017 2.7e-08 62.0 93 36.6
Lj3P550T16 Lonicera japonica HOM05D000007 ORTHO05D000017 4.5e-08 61.2 93 35.5
Peaxi162Scf00526g00073 Petunia axillaris HOM05D000007 ORTHO05D000017 7.8e-08 60.5 92 33.7
PGSC0003DMG400031292 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.0e-07 60.1 67 40.3
ECA233G3278 Erigeron canadensis HOM05D006138 ORTHO05D007778 2.3e-07 58.9 66 43.9
Nitab4.5_0006812g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.9e-07 58.5 95 35.8
Actinidia26832 Actinidia chinensis HOM05D000007 ORTHO05D000017 3.9e-07 58.2 94 37.2
SGA_v2.0_scaffold59G20641 Striga asiatica HOM05D000007 ORTHO05D000017 3.9e-07 58.2 65 44.6
Nitab4.5_0000635g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 5.0e-07 57.8 72 38.9
Nitab4.5_0002182g0070 Nicotiana tabacum HOM05D000007 ORTHO05D000017 6.6e-07 57.4 96 34.4
Peaxi162Scf00047g00844 Petunia axillaris HOM05D000007 ORTHO05D000017 6.6e-07 57.4 65 38.5
Lj3P550T42 Lonicera japonica HOM05D000007 ORTHO05D000017 8.6e-07 57.0 69 42.0
DCAR_024490 Daucus carota HOM05D006025 ORTHO05D008547 1.1e-06 56.6 67 40.3
DCAR_026597 Daucus carota HOM05D000007 ORTHO05D000017 1.1e-06 56.6 69 39.1
Lsat_1_v5_gn_6_61400 Lactuca sativa HOM05D000007 ORTHO05D000017 1.1e-06 56.6 68 41.2
Nitab4.5_0000960g0220 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.1e-06 56.6 67 38.8
Oeu022123.1 Olea europaea HOM05D000007 ORTHO05D000017 1.1e-06 56.6 68 42.6
Sopen04g035630 Solanum pennellii HOM05D000007 ORTHO05D000017 1.1e-06 56.6 79 36.7
PGSC0003DMG403021681 Solanum tuberosum HOM05D000007 ORTHO05D000017 1.1e-06 56.6 69 40.6
Lj3P552T19 Lonicera japonica HOM05D000007 ORTHO05D000017 1.5e-06 56.2 93 34.4
Nitab4.5_0000191g0060 Nicotiana tabacum HOM05D000007 ORTHO05D000017 1.5e-06 56.2 69 37.7
CAN.G1437.10 Capsicum annuum HOM05D000007 ORTHO05D000017 1.9e-06 55.8 63 41.3
Cc06_g16460 Coffea canephora HOM05D000007 ORTHO05D000017 2.5e-06 55.5 71 32.4
Nitab4.5_0002398g0010 Nicotiana tabacum HOM05D000007 ORTHO05D000017 2.5e-06 55.5 74 39.2
Gohir.A09G200901 Gossypium hirsutum HOM05D000007 ORTHO05D000017 3.3e-06 55.1 75 38.7
Solyc09g091690.1 Solanum lycopersicum HOM05D000007 ORTHO05D000017 4.3e-06 54.7 63 39.7
Sopen09g034590 Solanum pennellii HOM05D000007 ORTHO05D000017 4.3e-06 54.7 63 39.7
PGSC0003DMG400012267 Solanum tuberosum HOM05D000007 ORTHO05D000017 4.3e-06 54.7 57 45.6
MSTRG.24628 Avicennia marina HOM05D000007 ORTHO05D000017 5.6e-06 54.3 70 41.4
CSS0002420 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.6e-06 54.3 73 38.4
CSS0024527 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D000017 5.6e-06 54.3 73 38.4
COL.COLO4_21619 Corchorus olitorius HOM05D000007 ORTHO05D000017 5.6e-06 54.3 66 42.4
Peaxi162Scf00186g00133 Petunia axillaris HOM05D000007 ORTHO05D000017 5.6e-06 54.3 65 33.8
PGSC0003DMG400009957 Solanum tuberosum HOM05D000007 ORTHO05D000017 5.6e-06 54.3 79 35.4
CAN.G1655.5 Capsicum annuum HOM05D000007 ORTHO05D000017 7.3e-06 53.9 69 39.1
Gohir.D09G195100 Gossypium hirsutum HOM05D000007 ORTHO05D000017 7.3e-06 53.9 75 37.3
Gorai.006G218500 Gossypium raimondii HOM05D000007 ORTHO05D000017 7.3e-06 53.9 75 37.3
Rhsim01G0117500 Rhododendron simsii HOM05D000007 ORTHO05D000017 7.3e-06 53.9 64 40.6
Dinv38361 Davidia involucrata HOM05D000007 ORTHO05D000017 9.5e-06 53.5 63 39.7
Peaxi162Scf00442g00014 Petunia axillaris HOM05D000007 ORTHO05D000017 9.5e-06 53.5 65 36.9
Sopen09g034610 Solanum pennellii HOM05D000007 ORTHO05D000017 9.5e-06 53.5 71 35.2
PGSC0003DMG400029655 Solanum tuberosum HOM05D000007 ORTHO05D000017 9.5e-06 53.5 71 35.2


User provided reference genes

Program Settings