Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G82.22 Capsicum annuum HOM05D000141 ORTHO05D043448 1.5e-95 352.8 180 100.0
CAN.G164.4 Capsicum annuum HOM05D000141 ORTHO05D001311 2.5e-82 308.9 179 87.7
PGSC0003DMG401007845 Solanum tuberosum HOM05D000141 ORTHO05D001311 1.1e-64 250.4 179 73.2
Solyc12g011290.2 Solanum lycopersicum HOM05D000141 ORTHO05D001311 5.9e-63 244.6 180 73.3
Sopen12g006620 Solanum pennellii HOM05D000141 ORTHO05D001311 1.8e-59 233.0 179 70.9
Nitab4.5_0000505g0070 Nicotiana tabacum HOM05D000141 ORTHO05D001311 2.5e-53 212.6 178 65.2
Nitab4.5_0000639g0260 Nicotiana tabacum HOM05D000141 ORTHO05D001311 3.2e-53 212.2 180 64.4
Peaxi162Scf00000g00587 Petunia axillaris HOM05D000141 ORTHO05D001311 2.0e-39 166.4 207 52.2
Lj1C805T5 Lonicera japonica HOM05D000141 ORTHO05D001311 2.8e-28 129.4 169 50.9
Dinv26638 Davidia involucrata HOM05D000141 ORTHO05D001311 1.0e-27 127.5 175 53.1
Sopen09g031530 Solanum pennellii HOM05D000141 ORTHO05D043448 1.0e-27 127.5 89 77.5
CSS0044535 Camellia sinensis var. sinensis HOM05D000141 ORTHO05D001311 6.8e-27 124.8 177 48.0
ClCG07G010630 Citrullus lanatus HOM05D000141 ORTHO05D001311 3.4e-26 122.5 187 40.6
Potri.011G140000 Populus trichocarpa HOM05D000141 ORTHO05D001311 7.0e-24 114.8 176 41.5
Thecc.07G157900 Theobroma cacao HOM05D000141 ORTHO05D001311 2.0e-23 113.2 185 41.6
Haze_08513 Corylus avellana HOM05D000141 ORTHO05D001311 2.7e-23 112.8 180 41.7
Actinidia20594 Actinidia chinensis HOM05D000141 ORTHO05D001311 4.5e-23 112.1 179 46.4
Cpa.g.sc229.5 Carica papaya HOM05D000141 ORTHO05D001311 5.9e-23 111.7 184 40.8
Sabra11G0126100 Salix brachista HOM05D000141 ORTHO05D001311 5.9e-23 111.7 173 41.6
MELO3C016173.2 Cucumis melo HOM05D000141 ORTHO05D001311 7.8e-23 111.3 187 39.6
CiPaw.12G006000 Carya illinoinensis HOM05D000141 ORTHO05D001311 1.3e-22 110.5 184 41.8
Rhsim06G0183600 Rhododendron simsii HOM05D000141 ORTHO05D001311 1.3e-22 110.5 175 44.6
Cc05_g10030 Coffea canephora HOM05D000141 ORTHO05D001311 8.6e-22 107.8 180 42.8
Atru.chr2.1842 Acer truncatum HOM05D000141 ORTHO05D001311 1.1e-21 107.5 191 40.3
MD10G1197400 Malus domestica HOM05D000141 ORTHO05D001311 3.3e-21 105.9 188 41.0
Actinidia12332 Actinidia chinensis HOM05D000141 ORTHO05D001311 4.3e-21 105.5 174 40.8
TAR512G0002 Trochodendron aralioides HOM05D000141 ORTHO05D001311 4.3e-21 105.5 178 41.0
Cfa019444 Carpinus fangiana HOM05D000141 ORTHO05D001311 9.5e-21 104.4 179 40.2
MD05G1213600 Malus domestica HOM05D000141 ORTHO05D001311 1.2e-20 104.0 188 40.4
vmacro12029 Vaccinium macrocarpon HOM05D000141 ORTHO05D001311 1.2e-20 104.0 174 42.5
CsaV3_4G007670 Cucumis sativus L. HOM05D000141 ORTHO05D001311 3.6e-20 102.4 186 38.7
Manes.03G090900 Manihot esculenta HOM05D000141 ORTHO05D001311 4.7e-20 102.1 183 38.3
Prupe.4G144400 Prunus persica HOM05D000141 ORTHO05D001311 4.7e-20 102.1 179 39.1
FAN21G3407 Fragaria x ananassa HOM05D000141 ORTHO05D001311 8.0e-20 101.3 186 40.9
Eucgr.F03192 Eucalyptus grandis HOM05D000141 ORTHO05D001311 1.0e-19 100.9 183 38.8
Gohir.A01G036700 Gossypium hirsutum HOM05D000141 ORTHO05D001311 1.0e-19 100.9 184 40.2
FAN11G1205 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.8e-19 100.1 186 40.3
FAN25G3242 Fragaria x ananassa HOM05D000141 ORTHO05D001311 1.8e-19 100.1 186 40.3
RcHm_v2.0_Chr5g0027091 Rosa chinensis HOM05D000141 ORTHO05D001311 1.8e-19 100.1 188 39.4
Gohir.D01G024000 Gossypium hirsutum HOM05D000141 ORTHO05D001311 2.3e-19 99.8 184 38.6
Gorai.002G032500 Gossypium raimondii HOM05D000141 ORTHO05D001311 2.3e-19 99.8 184 38.6
Ciclev10018793m.g Citrus clementina HOM05D000141 ORTHO05D001311 5.2e-19 98.6 186 40.3
FAN16G3344 Fragaria x ananassa HOM05D000141 ORTHO05D001311 5.2e-19 98.6 186 40.3
QL04p072968 Quercus lobata HOM05D000141 ORTHO05D001311 8.9e-19 97.8 186 39.8
MSTRG.14999 Avicennia marina HOM05D000141 ORTHO05D001311 1.2e-18 97.4 169 40.8
Nn3g20438 Nelumbo nucifera HOM05D000141 ORTHO05D001311 1.2e-18 97.4 184 36.4
COL.COLO4_07051 Corchorus olitorius HOM05D000141 ORTHO05D001311 1.5e-18 97.1 189 39.7
FvH4_3g16110 Fragaria vesca HOM05D000141 ORTHO05D001311 1.5e-18 97.1 186 39.8
Potri.001G436200 Populus trichocarpa HOM05D000141 ORTHO05D001311 1.5e-18 97.1 175 38.9
Duzib213G0002 Durio zibethinus HOM05D000141 ORTHO05D001311 2.2e-17 93.2 174 39.7
Sed0016222 Sechium edule HOM05D000141 ORTHO05D001311 2.2e-17 93.2 151 43.0
Manes.15G101400 Manihot esculenta HOM05D000141 ORTHO05D001311 2.9e-17 92.8 186 37.6
CANSAT56G1181 Cannabis sativa HOM05D000141 ORTHO05D001311 3.7e-17 92.4 187 36.9
CANSAT56G4238 Cannabis sativa HOM05D000141 ORTHO05D001311 8.3e-17 91.3 187 36.4
Sed0022606 Sechium edule HOM05D000141 ORTHO05D001311 7.0e-16 88.2 187 36.9
TWI38G2413 Tripterygium wilfordii HOM05D000141 ORTHO05D001311 9.2e-16 87.8 179 36.9
arahy.Tifrunner.gnm1.ann1.36GBYI Arachis hypogaea HOM05D000141 ORTHO05D001311 2.0e-15 86.7 187 35.3
arahy.Tifrunner.gnm1.ann1.RXP99Y Arachis hypogaea HOM05D000141 ORTHO05D001311 2.0e-15 86.7 187 35.3
Glyma.15G252800 Glycine max HOM05D000141 ORTHO05D001311 3.5e-15 85.9 187 32.6
DCAR_019643 Daucus carota HOM05D000141 ORTHO05D001311 7.8e-15 84.7 179 38.0
Lj3g0018650 Lotus japonicus HOM05D000141 ORTHO05D001311 7.8e-15 84.7 179 36.3
THA.LOC104812281 Tarenaya hassleriana HOM05D000141 ORTHO05D001311 2.3e-14 83.2 185 37.3
AUR62042369 Chenopodium quinoa HOM05D000141 ORTHO05D001311 3.0e-14 82.8 187 38.5
SalBow8G4088 Salvia bowleyana HOM05D000141 ORTHO05D001311 3.9e-14 82.4 178 34.8
EL10Ac4g08530 Beta vulgaris HOM05D000141 ORTHO05D001311 3.3e-13 79.3 181 35.9
Migut.M00669 Erythranthe guttata HOM05D000141 ORTHO05D001311 4.3e-13 79.0 179 38.0
AUR62037929 Chenopodium quinoa HOM05D000141 ORTHO05D001311 5.6e-13 78.6 180 37.8
Glyma.08G174300 Glycine max HOM05D000141 ORTHO05D001311 9.5e-13 77.8 189 32.3
VMungo1080G0426 Vigna mungo HOM05D000141 ORTHO05D001311 1.6e-12 77.0 187 32.6
Aqoxy4G00059 Aquilegia oxysepala HOM05D000141 ORTHO05D001311 2.1e-12 76.6 146 39.7
TAR624G0806 Trochodendron aralioides HOM05D000141 ORTHO05D001311 1.4e-11 73.9 180 36.1
BcaC03g15362 Brassica carinata HOM05D000141 ORTHO05D001311 2.3e-11 73.2 183 36.6
C02p29670 Brassica napus HOM05D000141 ORTHO05D001311 2.3e-11 73.2 183 36.6
BolC2t09016H Brassica oleracea HOM05D000141 ORTHO05D001311 2.3e-11 73.2 183 36.6
ECA234G2348 Erigeron canadensis HOM05D000141 ORTHO05D001311 2.3e-11 73.2 175 37.1
Ca_03483_v3 Cicer arietinum L. HOM05D000141 ORTHO05D001311 3.1e-11 72.8 183 32.8
Lalb_Chr25g0285251 Lupinus albus HOM05D000141 ORTHO05D001311 3.1e-11 72.8 187 32.6
Phvul.005G054500 Phaseolus vulgaris HOM05D000141 ORTHO05D001311 3.1e-11 72.8 188 31.4
Sp5g27340 Schrenkiella parvula HOM05D000141 ORTHO05D001311 8.9e-11 71.2 185 37.3
Ah.06g187390 Amaranthus hybridus HOM05D000141 ORTHO05D001311 1.2e-10 70.9 187 34.8
PSO541G4054 Papaver somniferum HOM05D000141 ORTHO05D001311 1.2e-10 70.9 160 38.1
A02p17850 Brassica napus HOM05D000141 ORTHO05D001311 2.0e-10 70.1 183 35.5
BraA02t06835Z Brassica rapa HOM05D000141 ORTHO05D001311 2.0e-10 70.1 183 35.5
Aa31LG4G2630 Aethionema arabicum HOM05D000141 ORTHO05D001311 3.4e-10 69.3 174 36.8
HanXRQChr10g0306651 Helianthus annuus HOM05D000141 ORTHO05D001311 1.7e-09 67.0 189 37.0
Medtr2g069950 Medicago truncatula HOM05D000141 ORTHO05D001311 2.2e-09 66.6 180 31.1
A07p38380 Brassica napus HOM05D000141 ORTHO05D001311 6.4e-09 65.1 187 33.2
BraA07t31399Z Brassica rapa HOM05D000141 ORTHO05D001311 6.4e-09 65.1 187 33.2
BolC6t39689H Brassica oleracea HOM05D000141 ORTHO05D001311 8.3e-09 64.7 186 34.9
Lsat_1_v5_gn_5_121381 Lactuca sativa HOM05D000141 ORTHO05D001311 8.3e-09 64.7 181 34.8
BcaB05g24734 Brassica carinata HOM05D000141 ORTHO05D001311 1.9e-08 63.5 182 33.0
BcaC08g46672 Brassica carinata HOM05D000141 ORTHO05D001311 1.9e-08 63.5 186 34.9
C06p46420 Brassica napus HOM05D000141 ORTHO05D001311 1.9e-08 63.5 186 34.9
Psat1g009760 Pisum sativum HOM05D000141 ORTHO05D001311 1.9e-08 63.5 181 32.0
Thhalv10018049m.g Eutrema salsugineum HOM05D000141 ORTHO05D001311 7.0e-08 61.6 131 41.2
PGR031G0118 Punica granatum HOM05D000141 ORTHO05D001311 1.2e-07 60.8 177 32.2
AT1G72250 Arabidopsis thaliana HOM05D000141 ORTHO05D001311 1.7e-06 57.0 115 37.4
BcaB03g14969 Brassica carinata HOM05D000141 ORTHO05D001311 6.6e-06 55.1 178 33.7
ATR1098G139 Amborella trichopoda HOM05D000141 ORTHO05D001311 8.6e-06 54.7 123 39.8


User provided reference genes

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