Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G811.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.9e-125 452.6 235 100.0
CAN.G6027.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.4e-96 356.7 235 81.7
CAN.G1933.1 Capsicum annuum HOM05D009823 ORTHO05D011888 6.9e-96 354.4 232 82.3
CAN.G166.1 Capsicum annuum HOM05D009823 ORTHO05D011888 3.6e-60 235.7 243 57.6
CAN.G177.16 Capsicum annuum HOM05D000004 ORTHO05D011888 2.7e-44 183.0 235 49.8
CAN.G11330.1 Capsicum annuum HOM05D009823 ORTHO05D011888 1.0e-43 181.0 191 57.6
CAN.G1683.3 Capsicum annuum HOM05D009823 ORTHO05D011888 1.5e-37 160.6 151 57.6
CAN.G813.1 Capsicum annuum HOM05D009823 ORTHO05D011888 2.7e-36 156.4 119 68.9
CAN.G660.14 Capsicum annuum HOM05D009823 ORTHO05D011888 5.7e-34 148.7 104 76.0
CAN.G298.18 Capsicum annuum HOM05D009823 ORTHO05D011888 1.7e-33 147.1 104 72.1
CAN.G1125.8 Capsicum annuum HOM05D009823 ORTHO05D011888 6.3e-33 145.2 104 75.0
CAN.G1213.6 Capsicum annuum HOM05D009823 ORTHO05D011888 5.9e-31 138.7 104 71.2
CAN.G509.11 Capsicum annuum HOM05D000907 ORTHO05D011888 2.1e-28 130.2 103 68.9
CAN.G226.11 Capsicum annuum HOM05D009823 ORTHO05D011888 2.8e-25 119.8 146 51.4
CAN.G1017.2 Capsicum annuum HOM05D009823 ORTHO05D011888 1.4e-24 117.5 117 53.8
CAN.G400.16 Capsicum annuum HOM05D009823 ORTHO05D011888 1.4e-24 117.5 90 67.8
CAN.G48.23 Capsicum annuum HOM05D009823 ORTHO05D011888 1.2e-23 114.4 83 74.7
CAN.G165.31 Capsicum annuum HOM05D009823 ORTHO05D011888 2.0e-23 113.6 73 78.1
CAN.G277.8 Capsicum annuum HOM05D001060 ORTHO05D011888 2.0e-23 113.6 114 56.1
CAN.G262.17 Capsicum annuum HOM05D000541 ORTHO05D000137 2.9e-22 109.8 77 74.0
CAN.G734.4 Capsicum annuum HOM05D009823 ORTHO05D011888 1.0e-19 101.3 115 50.4
CAN.G610.84 Capsicum annuum HOM05D009823 ORTHO05D011888 3.0e-19 99.8 92 60.9
CAN.G65.22 Capsicum annuum HOM05D009823 ORTHO05D011888 1.8e-16 90.5 83 55.4
CAN.G143.46 Capsicum annuum HOM05D009823 ORTHO05D011888 5.9e-15 85.5 76 61.8
CAN.G716.10 Capsicum annuum HOM05D009823 ORTHO05D011888 1.7e-14 84.0 117 44.4
CAN.G185.3 Capsicum annuum HOM05D009823 ORTHO05D011888 4.0e-11 72.8 54 61.1
CAN.G764.8 Capsicum annuum HOM05D000541 ORTHO05D000137 5.2e-11 72.4 51 76.5
CAN.G1370.2 Capsicum annuum HOM05D002975 ORTHO05D003564 6.4e-09 65.5 44 77.3
Sopen09g015870 Solanum pennellii HOM05D012814 ORTHO05D015189 8.3e-09 65.1 100 41.0
Peaxi162Scf00660g00052 Petunia axillaris HOM05D002975 ORTHO05D003564 1.4e-08 64.3 44 75.0
Solyc12g005060.1 Solanum lycopersicum HOM05D002975 ORTHO05D003564 1.9e-08 63.9 45 71.1
Sopen12g001060 Solanum pennellii HOM05D002975 ORTHO05D003564 1.9e-08 63.9 45 71.1
CAN.G243.5 Capsicum annuum HOM05D002493 ORTHO05D011888 3.2e-08 63.2 86 44.2
Sopen03g019710 Solanum pennellii HOM05D012814 ORTHO05D015189 4.1e-08 62.8 114 33.3
Nitab4.5_0000981g0030 Nicotiana tabacum HOM05D002975 ORTHO05D003564 5.4e-08 62.4 44 72.7
PGSC0003DMG400027875 Solanum tuberosum HOM05D002975 ORTHO05D003564 5.4e-08 62.4 44 72.7
Ca_14736_v3 Cicer arietinum L. HOM05D002975 ORTHO05D003564 9.2e-08 61.6 44 70.5
Zm00001eb322600 Zea mays HOM05D002975 ORTHO05D003564 1.2e-07 61.2 44 68.2
arahy.Tifrunner.gnm1.ann1.F6CLKD Arachis hypogaea HOM05D002975 ORTHO05D003564 1.6e-07 60.8 44 72.7
arahy.Tifrunner.gnm1.ann1.KSV0XM Arachis hypogaea HOM05D002975 ORTHO05D003564 1.6e-07 60.8 44 72.7
Migut.H01823 Erythranthe guttata HOM05D002975 ORTHO05D003564 1.6e-07 60.8 42 73.8
Eucgr.F00755 Eucalyptus grandis HOM05D002975 ORTHO05D003564 1.6e-07 60.8 44 68.2
Ah.04g165920 Amaranthus hybridus HOM05D002975 ORTHO05D003564 2.0e-07 60.5 44 70.5
COL.COLO4_31778 Corchorus olitorius HOM05D002975 ORTHO05D003564 2.0e-07 60.5 45 71.1
GSVIVG01012724001 Vitis vinifera HOM05D002890 ORTHO05D005855 2.0e-07 60.5 45 68.9
PGR083G0161 Punica granatum HOM05D002975 ORTHO05D003564 2.7e-07 60.1 44 68.2
Cc05_g13860 Coffea canephora HOM05D002975 ORTHO05D003564 3.5e-07 59.7 45 64.4
Peaxi162Scf01102g00015 Petunia axillaris HOM05D002975 ORTHO05D003564 3.5e-07 59.7 45 68.9
CiPaw.10G071300 Carya illinoinensis HOM05D002975 ORTHO05D003564 4.6e-07 59.3 44 68.2
Glyma.13G204800 Glycine max HOM05D002975 ORTHO05D003564 4.6e-07 59.3 44 68.2
Glyma.15G107900 Glycine max HOM05D002975 ORTHO05D003564 4.6e-07 59.3 44 68.2
Os07g0513000 Oryza sativa ssp. japonica HOM05D002975 ORTHO05D003564 6.0e-07 58.9 44 65.9
CSS0000198 Camellia sinensis var. sinensis HOM05D002975 ORTHO05D003564 7.8e-07 58.5 44 68.2
arahy.Tifrunner.gnm1.ann1.B1KDZW Arachis hypogaea HOM05D002975 ORTHO05D003564 1.0e-06 58.2 41 68.3
Nitab4.5_0007084g0010 Nicotiana tabacum HOM05D002975 ORTHO05D003564 1.0e-06 58.2 44 68.2
THA.LOC104808203 Tarenaya hassleriana HOM05D002975 ORTHO05D003564 1.0e-06 58.2 44 63.6
SGA_v2.0_scaffold18G08542 Striga asiatica HOM05D002975 ORTHO05D003564 1.3e-06 57.8 44 65.9
ATR0794G024 Amborella trichopoda HOM05D002975 ORTHO05D003564 1.7e-06 57.4 45 64.4
Potri.011G024700 Populus trichocarpa HOM05D002975 ORTHO05D003564 1.7e-06 57.4 44 65.9
Lj2P268T28 Lonicera japonica HOM05D002975 ORTHO05D003564 2.3e-06 57.0 45 66.7
Medtr2g023290 Medicago truncatula HOM05D002975 ORTHO05D005855 2.3e-06 57.0 45 66.7
Phvul.006G044600 Phaseolus vulgaris HOM05D002975 ORTHO05D003564 2.3e-06 57.0 44 61.4
Psat5g178400 Pisum sativum HOM05D002975 ORTHO05D003564 3.0e-06 56.6 44 63.6
Aa31LG9G9750 Aethionema arabicum HOM05D002975 ORTHO05D003564 3.9e-06 56.2 38 76.3
Lsat_1_v5_gn_7_16100 Lactuca sativa HOM05D002975 ORTHO05D003564 3.9e-06 56.2 45 66.7
TWI63G1627 Tripterygium wilfordii HOM05D002975 ORTHO05D003564 3.9e-06 56.2 44 63.6
Ciclev10008444m.g Citrus clementina HOM05D002975 ORTHO05D003564 5.0e-06 55.8 44 61.4
Peaxi162Scf00248g00212 Petunia axillaris HOM05D016080 ORTHO05D015731 5.0e-06 55.8 87 35.6
Peaxi162Scf01016g00111 Petunia axillaris HOM05D016080 ORTHO05D015731 5.0e-06 55.8 114 31.6
Actinidia05514 Actinidia chinensis HOM05D002975 ORTHO05D003564 6.6e-06 55.5 44 63.6
Aqoxy1G02146 Aquilegia oxysepala HOM05D002975 ORTHO05D003564 6.6e-06 55.5 45 62.2
CiPaw.09G092200 Carya illinoinensis HOM05D002975 ORTHO05D003564 6.6e-06 55.5 44 65.9
FvH4_3g02060 Fragaria vesca HOM05D002975 ORTHO05D003564 6.6e-06 55.5 44 65.9
THA.LOC104818017 Tarenaya hassleriana HOM05D002975 ORTHO05D003564 8.6e-06 55.1 45 64.4


User provided reference genes

Program Settings