Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G81.12 Capsicum annuum HOM05D006378 ORTHO05D007959 4.8e-174 614.4 305 100.0
CAN.G62.5 Capsicum annuum HOM05D006378 ORTHO05D007959 8.5e-155 550.4 304 92.1
PGSC0003DMG400019029 Solanum tuberosum HOM05D006378 ORTHO05D007959 9.4e-138 493.8 304 84.2
Solyc07g041870.3 Solanum lycopersicum HOM05D006378 ORTHO05D007959 3.0e-136 488.8 304 82.6
Sopen07g021350 Solanum pennellii HOM05D006378 ORTHO05D007959 3.3e-135 485.3 304 82.6
Nitab4.5_0000343g0150 Nicotiana tabacum HOM05D006378 ORTHO05D007959 5.7e-135 484.6 305 83.3
Nitab4.5_0009436g0010 Nicotiana tabacum HOM05D006378 ORTHO05D007959 1.3e-134 483.4 305 83.3
Peaxi162Scf00127g01816 Petunia axillaris HOM05D006378 ORTHO05D007959 7.0e-133 477.6 304 82.2
Manes.03G040400 Manihot esculenta HOM05D006378 ORTHO05D007959 5.2e-104 381.7 307 63.8
vmacro06342 Vaccinium macrocarpon HOM05D006378 ORTHO05D007959 8.9e-104 380.9 307 62.9
Dinv42394 Davidia involucrata HOM05D006378 ORTHO05D007959 2.6e-103 379.4 307 64.2
Rhsim03G0227500 Rhododendron simsii HOM05D006378 ORTHO05D007959 4.4e-103 378.6 307 61.6
Potri.006G141900 Populus trichocarpa HOM05D006378 ORTHO05D007959 5.4e-101 371.7 308 63.0
CSS0003361 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 9.2e-101 370.9 307 62.2
CSS0014220 Camellia sinensis var. sinensis HOM05D006378 ORTHO05D007959 9.2e-101 370.9 307 62.2
Hma1.2p1_0179F.1_g079520 Hydrangea macrophylla HOM05D006378 ORTHO05D007959 1.2e-100 370.5 308 64.0
Cc06_g12180 Coffea canephora HOM05D006378 ORTHO05D007959 2.0e-100 369.8 307 63.2
TAR383G0342 Trochodendron aralioides HOM05D006378 ORTHO05D007959 3.5e-100 369.0 306 63.7
QL11p000773 Quercus lobata HOM05D006378 ORTHO05D007959 4.6e-100 368.6 307 60.9
Lj7C687T7 Lonicera japonica HOM05D006378 ORTHO05D007959 6.0e-100 368.2 306 60.8
Sabra06G0111000 Salix brachista HOM05D006378 ORTHO05D007959 1.0e-99 367.5 308 62.7
ECA236G3597 Erigeron canadensis HOM05D006378 ORTHO05D007959 3.9e-99 365.5 307 61.2
Oeu035912.1 Olea europaea HOM05D006378 ORTHO05D007959 6.6e-99 364.8 308 63.3
GSVIVG01015082001 Vitis vinifera HOM05D006378 ORTHO05D007959 1.9e-98 363.2 306 60.8
HanXRQChr06g0178331 Helianthus annuus HOM05D006378 ORTHO05D007959 1.4e-96 357.1 307 59.6
Thecc.09G076800 Theobroma cacao HOM05D006378 ORTHO05D007959 1.8e-96 356.7 307 59.3
Ciclev10007418m.g Citrus clementina HOM05D006378 ORTHO05D007959 3.4e-95 352.4 307 59.9
MSTRG.19459 Avicennia marina HOM05D006378 ORTHO05D007959 4.4e-95 352.1 307 63.2
Duzib168G0703 Durio zibethinus HOM05D006378 ORTHO05D007959 2.9e-94 349.4 307 59.6
Gorai.010G088400 Gossypium raimondii HOM05D006378 ORTHO05D007959 2.9e-94 349.4 307 59.0
Prupe.7G198800 Prunus persica HOM05D006378 ORTHO05D007959 2.9e-94 349.4 306 59.8
Gohir.D06G075500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 3.7e-94 349.0 307 59.0
CiPaw.03G206400 Carya illinoinensis HOM05D006378 ORTHO05D007959 6.4e-94 348.2 309 59.2
Gohir.A06G076500 Gossypium hirsutum HOM05D006378 ORTHO05D007959 1.1e-93 347.4 307 59.0
Lsat_1_v5_gn_8_86460 Lactuca sativa HOM05D006378 ORTHO05D007959 1.4e-93 347.1 308 59.4
ClCG03G015080 Citrullus lanatus HOM05D006378 ORTHO05D007959 6.0e-92 341.7 307 56.0
DCAR_011949 Daucus carota HOM05D006378 ORTHO05D007959 7.8e-92 341.3 307 58.6
Sc08g0008890 Simmondsia chinensis HOM05D006378 ORTHO05D007959 7.8e-92 341.3 307 58.3
FAN19G1878 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.0e-91 340.9 306 58.5
MBI19_g16222_MAGBIO Magnolia biondii HOM05D006378 ORTHO05D007959 2.3e-91 339.7 306 58.8
MD15G1217600 Malus domestica HOM05D006378 ORTHO05D007959 3.9e-91 339.0 308 57.8
RcHm_v2.0_Chr2g0094931 Rosa chinensis HOM05D006378 ORTHO05D007959 6.6e-91 338.2 306 56.9
Nn8g38637 Nelumbo nucifera HOM05D006378 ORTHO05D007959 8.6e-91 337.8 307 58.3
TWI34G0472 Tripterygium wilfordii HOM05D006378 ORTHO05D007959 8.6e-91 337.8 306 56.2
FAN26G1418 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.1e-90 337.4 306 57.8
FAN26G3001 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.1e-90 337.4 306 57.8
Cfa002988 Carpinus fangiana HOM05D006378 ORTHO05D007959 1.5e-90 337.0 306 58.2
Ca_02206_v3 Cicer arietinum L. HOM05D006378 ORTHO05D007959 1.9e-90 336.7 307 58.0
Aqoxy7G04130 Aquilegia oxysepala HOM05D006378 ORTHO05D007959 5.6e-90 335.1 307 58.0
TPR.G28586 Trifolium pratense HOM05D006378 ORTHO05D007959 9.5e-90 334.3 308 57.1
Migut.J00925 Erythranthe guttata HOM05D006378 ORTHO05D007959 1.2e-89 334.0 307 59.6
Cpa.g.sc28.38 Carica papaya HOM05D006378 ORTHO05D007959 1.6e-89 333.6 307 57.0
SalBow6G1560 Salvia bowleyana HOM05D006378 ORTHO05D007959 2.1e-89 333.2 307 59.9
SGA_v2.0_scaffold91G28112 Striga asiatica HOM05D006378 ORTHO05D007959 3.6e-89 332.4 307 59.3
Medtr2g041640 Medicago truncatula HOM05D006378 ORTHO05D007959 1.1e-88 330.9 307 57.7
PGR044G1219 Punica granatum HOM05D006378 ORTHO05D007959 2.3e-88 329.7 308 55.8
Lalb_Chr08g0232591 Lupinus albus HOM05D006378 ORTHO05D007959 3.1e-88 329.3 307 57.0
CANSAT56G1041 Cannabis sativa HOM05D006378 ORTHO05D007959 8.9e-88 327.8 308 56.5
Hund08780 Selenicereus undatus HOM05D006378 ORTHO05D007959 1.2e-87 327.4 309 56.6
MELO3C015521.2 Cucumis melo HOM05D006378 ORTHO05D007959 1.5e-87 327.0 307 54.7
Psat1g134280 Pisum sativum HOM05D006378 ORTHO05D007959 2.0e-87 326.6 307 56.7
CsaV3_1G041050 Cucumis sativus L. HOM05D006378 ORTHO05D007959 2.9e-86 322.8 310 55.2
arahy.Tifrunner.gnm1.ann1.LZ43MP Arachis hypogaea HOM05D006378 ORTHO05D007959 3.8e-86 322.4 307 55.4
AUR62025249 Chenopodium quinoa HOM05D006378 ORTHO05D007959 3.8e-86 322.4 311 54.7
Eucgr.C03329 Eucalyptus grandis HOM05D006378 ORTHO05D007959 3.8e-86 322.4 306 56.5
arahy.Tifrunner.gnm1.ann1.CBKZ0V Arachis hypogaea HOM05D006378 ORTHO05D007959 8.4e-86 321.2 307 55.0
Sed0026053 Sechium edule HOM05D006378 ORTHO05D007959 1.1e-85 320.9 309 54.4
PSO135G0915 Papaver somniferum HOM05D006378 ORTHO05D007959 1.9e-85 320.1 307 55.0
Glyma.15G177600 Glycine max HOM05D006378 ORTHO05D007959 2.4e-85 319.7 310 54.8
Ah.09g231620 Amaranthus hybridus HOM05D006378 ORTHO05D007959 3.2e-85 319.3 306 56.2
EL10Ac8g19061 Beta vulgaris HOM05D006378 ORTHO05D007959 4.1e-85 318.9 305 55.4
VMungo1309G1044 Vigna mungo HOM05D006378 ORTHO05D007959 1.6e-84 317.0 307 55.7
Lj6g0025012 Lotus japonicus HOM05D006378 ORTHO05D007959 4.6e-84 315.5 307 54.7
Eucgr.C03264 Eucalyptus grandis HOM05D006378 ORTHO05D007959 7.8e-84 314.7 306 55.2
THA.LOC104826591 Tarenaya hassleriana HOM05D006378 ORTHO05D007959 1.0e-83 314.3 307 54.7
Phvul.009G227300 Phaseolus vulgaris HOM05D006378 ORTHO05D007959 2.3e-83 313.2 307 55.0
C04p44250 Brassica napus HOM05D006378 ORTHO05D007959 8.6e-83 311.2 312 55.1
AUR62028935 Chenopodium quinoa HOM05D006378 ORTHO05D007959 1.9e-82 310.1 322 52.5
BcaC02g09569 Brassica carinata HOM05D006378 ORTHO05D007959 2.5e-82 309.7 312 55.1
BolC4t25998H Brassica oleracea HOM05D006378 ORTHO05D007959 2.5e-82 309.7 312 55.1
AT1G77550 Arabidopsis thaliana HOM05D006378 ORTHO05D007959 1.6e-81 307.0 307 54.4
A04p10600 Brassica napus HOM05D006378 ORTHO05D007959 1.6e-81 307.0 307 55.4
BraA04t16723Z Brassica rapa HOM05D006378 ORTHO05D007959 1.6e-81 307.0 307 55.4
Sp7g06720 Schrenkiella parvula HOM05D006378 ORTHO05D007959 1.6e-81 307.0 311 55.3
Carub.0002s2445 Capsella rubella HOM05D006378 ORTHO05D007959 2.1e-81 306.6 307 54.7
BcaB06g26949 Brassica carinata HOM05D006378 ORTHO05D007959 6.2e-81 305.1 307 55.4
Thhalv10003638m.g Eutrema salsugineum HOM05D006378 ORTHO05D007959 7.6e-79 298.1 307 53.1
Haze_26013 Corylus avellana HOM05D006378 ORTHO05D007959 2.2e-78 296.6 306 53.6
FvH4_1g08650 Fragaria vesca HOM05D006378 ORTHO05D007959 2.1e-76 290.0 227 63.9
AL2G37770 Arabidopsis lyrata HOM05D006378 ORTHO05D007959 6.0e-76 288.5 275 54.9
Zm00001eb401890 Zea mays HOM05D006378 ORTHO05D007959 8.7e-75 284.6 304 52.3
SEGI_03485 Sequoiadendron giganteum HOM05D006378 ORTHO05D007959 1.1e-74 284.3 308 51.9
COL.COLO4_18097 Corchorus olitorius HOM05D006378 ORTHO05D007959 1.5e-74 283.9 305 50.8
Os03g0179000 Oryza sativa ssp. japonica HOM05D006378 ORTHO05D007959 2.5e-74 283.1 304 51.6
FAN28G1488 Fragaria x ananassa HOM05D006378 ORTHO05D007959 1.3e-73 280.8 267 55.4
Aa31LG2G20840 Aethionema arabicum HOM05D006378 ORTHO05D007959 1.1e-72 277.7 307 53.1
HPP92_002164 Vanilla planifolia HOM05D006378 ORTHO05D007959 2.7e-68 263.1 307 48.5
ATR0598G254 Amborella trichopoda HOM05D006378 ORTHO05D007959 1.3e-67 260.8 271 52.4
unitig_578.g15677 Utricularia gibba HOM05D006378 ORTHO05D007959 3.9e-67 259.2 307 48.2
Atru.chr7.1707 Acer truncatum HOM05D006378 ORTHO05D007959 2.1e-65 253.4 182 64.8
CARHR071080 Cardamine hirsuta HOM05D006378 ORTHO05D007959 8.1e-65 251.5 227 57.7
AagrBONN_evm.TU.Sc2ySwM_117.2900 Anthoceros agrestis HOM05D006378 ORTHO05D007959 2.4e-56 223.4 306 42.2
Mapoly0113s0055 Marchantia polymorpha HOM05D006378 ORTHO05D007959 4.5e-55 219.2 306 40.8
SMO174G0008 Selaginella moellendorffii HOM05D006378 ORTHO05D007959 1.2e-52 211.1 304 40.8
Pp3c6_19960 Physcomitrium patens HOM05D006378 ORTHO05D007959 1.1e-48 198.0 306 41.2
CBR_g12041 Chara braunii HOM05D006378 ORTHO05D007959 1.0e-27 128.3 311 30.5
Psat7g020000 Pisum sativum HOM05D006378 ORTHO05D007959 1.0e-27 128.3 90 65.6
SHI02337 Sapria himalayana HOM05D006378 ORTHO05D007959 1.4e-24 117.9 134 44.0
Actinidia29932 Actinidia chinensis HOM05D006378 ORTHO05D007959 1.9e-13 80.9 85 55.3
SHI02338 Sapria himalayana HOM05D006378 ORTHO05D007959 1.4e-08 64.7 64 50.0
CDE05G1577 Ceratophyllum demersum HOM05D006378 ORTHO05D007959 1.3e-06 58.2 79 44.3


User provided reference genes

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