Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G809.96 Capsicum annuum HOM05D004787 ORTHO05D006972 7.2e-196 687.2 379 100.0
Sopen02g026040 Solanum pennellii HOM05D004787 ORTHO05D006972 1.0e-178 630.2 365 91.8
Solyc02g081410.3 Solanum lycopersicum HOM05D004787 ORTHO05D006972 3.0e-178 628.6 365 91.5
Nitab4.5_0003412g0040 Nicotiana tabacum HOM05D004787 ORTHO05D006972 4.0e-178 628.2 373 87.4
PGSC0003DMG400019729 Solanum tuberosum HOM05D004787 ORTHO05D006972 8.8e-178 627.1 365 91.2
Nitab4.5_0000483g0190 Nicotiana tabacum HOM05D004787 ORTHO05D006972 5.9e-166 587.8 352 89.2
Peaxi162Scf00344g02023 Petunia axillaris HOM05D004787 ORTHO05D006972 9.8e-161 570.5 315 92.1
Oeu022144.1 Olea europaea HOM05D004787 ORTHO05D006972 3.4e-153 545.4 342 80.4
unitig_32.g10735 Utricularia gibba HOM05D004787 ORTHO05D006972 1.1e-151 540.4 333 81.4
CSS0018052 Camellia sinensis var. sinensis HOM05D004787 ORTHO05D006972 4.1e-151 538.5 328 82.9
Hma1.2p1_0034F.1_g021480 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 7.1e-151 537.7 328 81.7
Dinv28256 Davidia involucrata HOM05D004787 ORTHO05D006972 1.2e-150 537.0 336 81.2
Lsat_1_v5_gn_3_69520 Lactuca sativa HOM05D004787 ORTHO05D006972 1.2e-150 537.0 341 79.5
Hma1.2p1_0034F.1_g021490 Hydrangea macrophylla HOM05D004787 ORTHO05D006972 3.5e-150 535.4 327 81.7
vmacro20447 Vaccinium macrocarpon HOM05D004787 ORTHO05D006972 1.0e-149 533.9 365 75.3
SGA_v2.0_scaffold45G17100 Striga asiatica HOM05D004787 ORTHO05D006972 6.6e-149 531.2 332 80.4
MSTRG.15622 Avicennia marina HOM05D004787 ORTHO05D006972 2.5e-148 529.3 334 78.1
Lj4C250G12 Lonicera japonica HOM05D004787 ORTHO05D006972 3.3e-148 528.9 367 74.9
Nn4g24844 Nelumbo nucifera HOM05D004787 ORTHO05D006972 3.3e-148 528.9 328 80.5
CDE05G1440 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 2.8e-147 525.8 336 79.2
SalBow5G5112 Salvia bowleyana HOM05D004787 ORTHO05D006972 2.8e-147 525.8 327 79.8
DCAR_003396 Daucus carota HOM05D004787 ORTHO05D006972 6.2e-147 524.6 334 79.3
Ciclev10011482m.g Citrus clementina HOM05D004787 ORTHO05D006972 8.1e-147 524.2 329 82.1
Rhsim07G0211400 Rhododendron simsii HOM05D004787 ORTHO05D006972 8.1e-147 524.2 328 80.5
arahy.Tifrunner.gnm1.ann1.0Y5IZW Arachis hypogaea HOM05D004787 ORTHO05D006972 1.4e-146 523.5 333 79.9
arahy.Tifrunner.gnm1.ann1.QP3PIR Arachis hypogaea HOM05D004787 ORTHO05D006972 1.4e-146 523.5 333 79.9
Psat5g143840 Pisum sativum HOM05D004787 ORTHO05D006972 2.4e-146 522.7 335 79.1
TAR629G0710 Trochodendron aralioides HOM05D004787 ORTHO05D006972 2.4e-146 522.7 328 79.3
PSO782G3524 Papaver somniferum HOM05D004787 ORTHO05D006972 4.0e-146 521.9 331 79.2
Ca_15115_v3 Cicer arietinum L. HOM05D004787 ORTHO05D006972 5.2e-146 521.5 331 78.9
Eucgr.F02919 Eucalyptus grandis HOM05D004787 ORTHO05D006972 6.8e-146 521.2 331 79.5
Manes.02G082200 Manihot esculenta HOM05D004787 ORTHO05D006972 6.8e-146 521.2 332 79.5
Aqoxy3G04198 Aquilegia oxysepala HOM05D004787 ORTHO05D006972 8.9e-146 520.8 328 79.6
PSO063G5381 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-145 520.4 331 78.5
Gohir.A12G052700 Gossypium hirsutum HOM05D004787 ORTHO05D006972 1.5e-145 520.0 328 80.8
Gorai.008G054500 Gossypium raimondii HOM05D004787 ORTHO05D006972 1.5e-145 520.0 328 80.8
CANSAT35G0608 Cannabis sativa HOM05D004787 ORTHO05D006972 3.4e-145 518.8 327 80.1
ClCG01G008420 Citrullus lanatus HOM05D004787 ORTHO05D006972 3.4e-145 518.8 338 78.4
Gohir.D12G051200 Gossypium hirsutum HOM05D004787 ORTHO05D006972 3.4e-145 518.8 328 80.5
Aa31LG5G13180 Aethionema arabicum HOM05D004787 ORTHO05D006972 4.4e-145 518.5 329 79.3
Lj6g0012338 Lotus japonicus HOM05D004787 ORTHO05D006972 4.4e-145 518.5 328 79.0
Glyma.18G045800 Glycine max HOM05D004787 ORTHO05D006972 5.8e-145 518.1 332 79.2
TWI53G0480 Tripterygium wilfordii HOM05D004787 ORTHO05D006972 5.8e-145 518.1 365 73.4
Migut.K00983 Erythranthe guttata HOM05D004787 ORTHO05D006972 7.6e-145 517.7 340 76.8
Lalb_Chr18g0053891 Lupinus albus HOM05D004787 ORTHO05D006972 7.6e-145 517.7 328 79.6
Thecc.04G058600 Theobroma cacao HOM05D004787 ORTHO05D006972 7.6e-145 517.7 328 79.9
Duzib138G0253 Durio zibethinus HOM05D004787 ORTHO05D006972 9.9e-145 517.3 328 79.9
TPR.G37333 Trifolium pratense HOM05D004787 ORTHO05D006972 1.3e-144 516.9 331 78.2
CsaV3_5G024370 Cucumis sativus L. HOM05D004787 ORTHO05D006972 1.7e-144 516.5 338 77.8
HanXRQChr16g0532401 Helianthus annuus HOM05D004787 ORTHO05D006972 2.2e-144 516.2 363 74.7
Phvul.006G085100 Phaseolus vulgaris HOM05D004787 ORTHO05D006972 2.9e-144 515.8 339 77.6
MELO3C025106.2 Cucumis melo HOM05D004787 ORTHO05D006972 4.9e-144 515.0 338 77.8
MD11G1181900 Malus domestica HOM05D004787 ORTHO05D006972 4.9e-144 515.0 328 78.7
THA.LOC104820926 Tarenaya hassleriana HOM05D004787 ORTHO05D006972 4.9e-144 515.0 340 77.6
VMungo0540G0637 Vigna mungo HOM05D004787 ORTHO05D006972 8.4e-144 514.2 327 79.5
Sed0001995 Sechium edule HOM05D004787 ORTHO05D006972 1.1e-143 513.8 335 77.6
Carub.0003s0181 Capsella rubella HOM05D004787 ORTHO05D006972 1.4e-143 513.5 335 76.7
Cpa.g.sc108.2 Carica papaya HOM05D004787 ORTHO05D006972 2.4e-143 512.7 330 78.8
Hund06861 Selenicereus undatus HOM05D004787 ORTHO05D006972 2.4e-143 512.7 325 80.0
AT3G02710 Arabidopsis thaliana HOM05D004787 ORTHO05D006972 3.2e-143 512.3 335 76.7
Medtr3g064180 Medicago truncatula HOM05D004787 ORTHO05D006972 3.2e-143 512.3 328 78.4
Atru.chr1.1965 Acer truncatum HOM05D004787 ORTHO05D006972 5.4e-143 511.5 327 78.6
Sp3g01740 Schrenkiella parvula HOM05D004787 ORTHO05D006972 7.1e-143 511.1 335 76.4
COL.COLO4_06952 Corchorus olitorius HOM05D004787 ORTHO05D006972 1.2e-142 510.4 327 79.8
HPP92_022084 Vanilla planifolia HOM05D004787 ORTHO05D006972 1.2e-142 510.4 328 76.8
BraA01t04622Z Brassica rapa HOM05D004787 ORTHO05D006972 1.6e-142 510.0 330 77.3
BolC1t05882H Brassica oleracea HOM05D004787 ORTHO05D006972 2.1e-142 509.6 330 77.3
AL3G12100 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 2.7e-142 509.2 335 76.1
Thhalv10020476m.g Eutrema salsugineum HOM05D004787 ORTHO05D006972 7.8e-142 507.7 334 75.7
Ah.04g162910 Amaranthus hybridus HOM05D004787 ORTHO05D006972 1.3e-141 506.9 333 77.5
BNapus_Darmor_BZH_scaffold_99p00220 Brassica napus HOM05D004787 ORTHO05D006972 1.3e-141 506.9 335 76.1
PGR004G1381 Punica granatum HOM05D004787 ORTHO05D006972 2.3e-141 506.1 335 76.1
ECA246G0632 Erigeron canadensis HOM05D004787 ORTHO05D006972 5.1e-141 505.0 335 74.3
CARHR076710 Cardamine hirsuta HOM05D004787 ORTHO05D006972 1.9e-140 503.1 335 76.1
Prupe.3G013000 Prunus persica HOM05D004787 ORTHO05D006972 1.9e-140 503.1 328 77.1
AUR62037503 Chenopodium quinoa HOM05D004787 ORTHO05D006972 2.5e-140 502.7 333 77.2
ATR0618G058 Amborella trichopoda HOM05D004787 ORTHO05D006972 4.3e-140 501.9 328 77.1
QL02p054528 Quercus lobata HOM05D004787 ORTHO05D006972 8.1e-139 497.7 334 76.3
FAN28G1537 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.4e-138 496.9 338 74.3
Haze_14069 Corylus avellana HOM05D004787 ORTHO05D006972 1.2e-137 493.8 352 73.3
RcHm_v2.0_Chr3g0487991 Rosa chinensis HOM05D004787 ORTHO05D006972 1.2e-137 493.8 328 76.2
CiPaw.03G008000 Carya illinoinensis HOM05D004787 ORTHO05D006972 2.6e-137 492.7 339 76.4
Cfa008000 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.7e-136 490.0 338 75.7
FvH4_1g27560 Fragaria vesca HOM05D004787 ORTHO05D006972 2.9e-136 489.2 336 74.1
Sabra04G0050800 Salix brachista HOM05D004787 ORTHO05D006972 1.9e-135 486.5 339 72.9
EL10Ac4g08906 Beta vulgaris HOM05D004787 ORTHO05D006972 2.4e-135 486.1 315 77.8
MBI06_g02537_MAGBIO Magnolia biondii HOM05D004787 ORTHO05D006972 2.7e-134 482.6 315 74.9
Potri.004G076600 Populus trichocarpa HOM05D004787 ORTHO05D006972 7.8e-134 481.1 337 72.7
FAN19G0382 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.5e-132 476.9 328 74.1
FAN26G3076 Fragaria x ananassa HOM05D004787 ORTHO05D006972 9.6e-132 474.2 325 74.2
FAN28G1012 Fragaria x ananassa HOM05D004787 ORTHO05D006972 1.3e-131 473.8 325 73.5
SEGI_38823 Sequoiadendron giganteum HOM05D004787 ORTHO05D006972 1.3e-131 473.8 328 74.1
Actinidia40400 Actinidia chinensis HOM05D004787 ORTHO05D006972 1.6e-131 473.4 328 74.4
Mapoly0108s0041 Marchantia polymorpha HOM05D004787 ORTHO05D006972 2.0e-121 439.9 331 66.8
AUR62004748 Chenopodium quinoa HOM05D004787 ORTHO05D006972 4.5e-121 438.7 333 69.7
AagrBONN_evm.TU.Sc2ySwM_228.1941__1942 Anthoceros agrestis HOM05D004787 ORTHO05D006972 9.9e-121 437.6 328 65.9
Pp3c23_13180 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.9e-118 427.9 325 65.8
Pp3c23_13183 Physcomitrium patens HOM05D004787 ORTHO05D006972 7.9e-118 427.9 325 65.8
Sc09g0004590 Simmondsia chinensis HOM05D004787 ORTHO05D006972 6.7e-117 424.9 310 71.6
CBR_g66787 Chara braunii HOM05D004787 ORTHO05D006972 1.4e-114 417.2 334 62.0
Zm00001eb259490 Zea mays HOM05D004787 ORTHO05D006972 3.4e-113 412.5 322 62.7
Os02g0831300 Oryza sativa ssp. japonica HOM05D004787 ORTHO05D006972 4.5e-113 412.1 316 63.9
SMO276G0035 Selaginella moellendorffii HOM05D004787 ORTHO05D006972 2.9e-112 409.5 315 65.1
HanXRQChr16g0532221 Helianthus annuus HOM05D004787 ORTHO05D006972 3.7e-107 392.5 397 58.2
BNapus_Darmor_BZH_scaffold_122p00190 Brassica napus HOM05D004787 ORTHO05D006972 1.8e-82 310.5 189 78.8
Cre02.g093300 Chlamydomonas reinhardtii HOM05D004787 ORTHO05D006972 1.0e-80 304.7 328 49.4
CDE02G3895 Ceratophyllum demersum HOM05D004787 ORTHO05D006972 4.8e-75 285.8 313 54.6
MCO05G673 Micromonas commoda HOM05D004787 ORTHO05D006972 1.6e-73 280.8 314 47.8
PRCOL_00000524 Prasinoderma coloniale HOM05D004787 ORTHO05D006972 2.1e-70 270.4 321 45.2
AL1G49080 Arabidopsis lyrata HOM05D004787 ORTHO05D006972 7.2e-63 245.4 143 83.9
Lsat_1_v5_gn_3_69560 Lactuca sativa HOM05D004787 ORTHO05D006972 2.3e-61 240.4 137 86.1
Cfa023088 Carpinus fangiana HOM05D004787 ORTHO05D006972 1.2e-41 174.9 334 35.3
Medtr8g023320 Medicago truncatula HOM05D004787 ORTHO05D006972 2.2e-35 154.1 115 64.3
GSVIVG01001945001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.7e-33 147.1 78 89.7
GSVIVG01035282001 Vitis vinifera HOM05D004787 ORTHO05D006972 2.7e-33 147.1 78 89.7
PSO409G0053 Papaver somniferum HOM05D004787 ORTHO05D006972 4.3e-31 139.8 345 31.6
PSO339G1514 Papaver somniferum HOM05D004787 ORTHO05D303367 6.2e-30 136.0 327 33.3
PSO675G0768 Papaver somniferum HOM05D004787 ORTHO05D302482 4.3e-23 113.2 265 31.3
PSO675G3772 Papaver somniferum HOM05D004787 ORTHO05D302583 2.2e-19 100.9 298 30.9
Zm00001eb168130 Zea mays HOM05D004787 ORTHO05D001664 3.8e-19 100.1 74 63.5
PSO541G6299 Papaver somniferum HOM05D004787 ORTHO05D302708 9.3e-18 95.5 296 29.4
Cpa.g.sc108.3 Carica papaya HOM05D004787 ORTHO05D006972 1.1e-15 88.6 64 71.9
PSO541G2889 Papaver somniferum HOM05D004787 ORTHO05D303989 4.8e-14 83.2 163 35.0
PSO478G0028 Papaver somniferum HOM05D004787 ORTHO05D006972 1.2e-12 78.6 130 43.1
PSO409G0034 Papaver somniferum HOM05D004787 ORTHO05D006972 3.4e-12 77.0 329 28.3
PSO063G0274 Papaver somniferum HOM05D004787 ORTHO05D006972 6.4e-11 72.8 229 32.8
PSO478G2704 Papaver somniferum HOM05D004787 ORTHO05D303020 6.4e-11 72.8 306 27.5
PSO170G0972 Papaver somniferum HOM05D004787 ORTHO05D303930 3.2e-10 70.5 296 27.7
PSO384G4943 Papaver somniferum HOM05D004787 ORTHO05D303805 3.5e-09 67.0 213 31.5
PSO675G1486 Papaver somniferum HOM05D004787 ORTHO05D006972 3.5e-09 67.0 149 33.6
PSO339G2032 Papaver somniferum HOM05D004787 ORTHO05D006972 5.1e-08 63.2 126 37.3
PSO339G2591 Papaver somniferum HOM05D004787 ORTHO05D006972 5.1e-08 63.2 126 37.3
PSO407G0282 Papaver somniferum HOM05D004787 ORTHO05D006972 5.1e-08 63.2 308 27.3


User provided reference genes

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