Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G809.16 Capsicum annuum HOM05D006710 ORTHO05D008353 5.1e-134 481.1 248 100.0
PGSC0003DMG400026653 Solanum tuberosum HOM05D006710 ORTHO05D008353 1.5e-104 383.3 244 83.6
Sopen08g012960 Solanum pennellii HOM05D006710 ORTHO05D008353 5.2e-102 374.8 240 82.9
Nitab4.5_0010747g0020 Nicotiana tabacum HOM05D006710 ORTHO05D008353 2.0e-98 362.8 244 80.3
Nitab4.5_0000424g0030 Nicotiana tabacum HOM05D006710 ORTHO05D008353 5.0e-97 358.2 240 80.8
Solyc08g043180.3 Solanum lycopersicum HOM05D006710 ORTHO05D008353 2.6e-93 345.9 215 84.7
Peaxi162Scf00071g00728 Petunia axillaris HOM05D006710 ORTHO05D008353 1.3e-89 333.6 246 73.6
Actinidia23607 Actinidia chinensis HOM05D006710 ORTHO05D008353 3.3e-88 328.9 248 72.6
Dinv40255 Davidia involucrata HOM05D006710 ORTHO05D008353 1.4e-86 323.6 248 69.4
Rhsim07G0179500 Rhododendron simsii HOM05D006710 ORTHO05D008353 2.0e-85 319.7 254 68.1
Actinidia05724 Actinidia chinensis HOM05D006710 ORTHO05D008353 9.8e-85 317.4 254 69.3
CSS0006596 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 1.7e-84 316.6 214 77.1
CSS0018519 Camellia sinensis var. sinensis HOM05D006710 ORTHO05D008353 2.2e-84 316.2 214 77.1
QL03p004347 Quercus lobata HOM05D006710 ORTHO05D008353 6.4e-84 314.7 242 69.0
Manes.09G163400 Manihot esculenta HOM05D006710 ORTHO05D008353 1.1e-83 313.9 245 68.2
Cfa006542 Carpinus fangiana HOM05D006710 ORTHO05D008353 7.0e-83 311.2 244 66.4
Haze_04239 Corylus avellana HOM05D006710 ORTHO05D008353 7.0e-83 311.2 248 66.9
vmacro05032 Vaccinium macrocarpon HOM05D006710 ORTHO05D008353 9.2e-83 310.8 238 70.6
Nn4g26145 Nelumbo nucifera HOM05D006710 ORTHO05D008353 2.7e-82 309.3 257 65.8
Sabra13G0027300 Salix brachista HOM05D006710 ORTHO05D008353 3.5e-82 308.9 251 65.3
PGR031G3544 Punica granatum HOM05D006710 ORTHO05D008353 1.0e-81 307.4 176 86.4
TWI56G0551 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 1.0e-81 307.4 242 66.9
FAN05G4089 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.3e-81 307.0 245 66.9
Ciclev10002268m.g Citrus clementina HOM05D006710 ORTHO05D008353 3.0e-81 305.8 239 66.5
TWI12G0766 Tripterygium wilfordii HOM05D006710 ORTHO05D008353 3.9e-81 305.4 241 65.6
AUR62000864 Chenopodium quinoa HOM05D006710 ORTHO05D008353 5.0e-81 305.1 253 65.6
AUR62005111 Chenopodium quinoa HOM05D006710 ORTHO05D008353 6.6e-81 304.7 251 65.3
Duzib177G0772 Durio zibethinus HOM05D006710 ORTHO05D008353 8.6e-81 304.3 241 65.1
Thecc.05G308800 Theobroma cacao HOM05D006710 ORTHO05D008353 1.1e-80 303.9 243 67.1
Gohir.D13G178900 Gossypium hirsutum HOM05D006710 ORTHO05D008353 9.5e-80 300.8 239 64.4
Gorai.013G204100 Gossypium raimondii HOM05D006710 ORTHO05D008353 9.5e-80 300.8 239 64.4
Potri.013G026500 Populus trichocarpa HOM05D006710 ORTHO05D008353 9.5e-80 300.8 239 65.3
FAN14G5365 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.6e-79 300.1 262 64.1
Eucgr.H04455 Eucalyptus grandis HOM05D006710 ORTHO05D008353 2.1e-79 299.7 241 65.1
Gohir.A13G173100 Gossypium hirsutum HOM05D006710 ORTHO05D008353 2.1e-79 299.7 239 63.6
CiPaw.08G166900 Carya illinoinensis HOM05D006710 ORTHO05D008353 2.8e-79 299.3 254 63.8
MSTRG.20477 Avicennia marina HOM05D006710 ORTHO05D008353 3.6e-79 298.9 266 60.9
RcHm_v2.0_Chr3g0454051 Rosa chinensis HOM05D006710 ORTHO05D008353 3.6e-79 298.9 255 62.7
CANSAT54G0344 Cannabis sativa HOM05D006710 ORTHO05D008353 4.7e-79 298.5 248 65.3
MD04G1209500 Malus domestica HOM05D006710 ORTHO05D008353 6.2e-79 298.1 247 63.2
HanXRQChr09g0258761 Helianthus annuus HOM05D006710 ORTHO05D008353 8.0e-79 297.7 243 63.4
Lj9A681T40 Lonicera japonica HOM05D006710 ORTHO05D008353 8.0e-79 297.7 261 62.8
Atru.chr2.492 Acer truncatum HOM05D006710 ORTHO05D008353 1.1e-78 297.4 245 64.5
Prupe.6G330500 Prunus persica HOM05D006710 ORTHO05D008353 1.1e-78 297.4 229 66.8
SalBow8G3090 Salvia bowleyana HOM05D006710 ORTHO05D008353 1.4e-78 297.0 182 79.7
Cpa.g.sc48.8 Carica papaya HOM05D006710 ORTHO05D008353 1.8e-78 296.6 242 65.3
MD12G1224100 Malus domestica HOM05D006710 ORTHO05D008353 2.3e-78 296.2 248 63.7
CsaV3_2G004900 Cucumis sativus L. HOM05D006710 ORTHO05D008353 3.1e-78 295.8 252 64.3
EL10Ac4g09302 Beta vulgaris HOM05D006710 ORTHO05D008353 5.2e-78 295.0 253 64.8
CARHR185990 Cardamine hirsuta HOM05D006710 ORTHO05D008353 1.5e-77 293.5 242 63.2
unitig_0.g2209 Utricularia gibba HOM05D006710 ORTHO05D008353 4.4e-77 292.0 236 63.1
AL6G39620 Arabidopsis lyrata HOM05D006710 ORTHO05D008353 7.5e-77 291.2 240 62.9
Gohir.D11G272800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 1.7e-76 290.0 235 63.0
Gorai.007G294100 Gossypium raimondii HOM05D006710 ORTHO05D008353 1.7e-76 290.0 235 63.0
Carub.0006s2515 Capsella rubella HOM05D006710 ORTHO05D008353 2.2e-76 289.7 240 62.5
arahy.Tifrunner.gnm1.ann1.ACRB0G Arachis hypogaea HOM05D006710 ORTHO05D008353 2.9e-76 289.3 236 66.5
COL.COLO4_13519 Corchorus olitorius HOM05D000735 ORTHO05D000838 3.7e-76 288.9 241 64.3
arahy.Tifrunner.gnm1.ann1.KZLY5F Arachis hypogaea HOM05D006710 ORTHO05D008353 6.4e-76 288.1 236 66.1
Lalb_Chr15g0077091 Lupinus albus HOM05D006710 ORTHO05D008353 1.4e-75 287.0 250 62.4
Glyma.10G157000 Glycine max HOM05D006710 ORTHO05D008353 4.1e-75 285.4 218 67.0
AT5G27390 Arabidopsis thaliana HOM05D006710 ORTHO05D008353 5.4e-75 285.0 240 61.2
THA.LOC104802809 Tarenaya hassleriana HOM05D006710 ORTHO05D008353 5.4e-75 285.0 245 62.9
CDE08G1170 Ceratophyllum demersum HOM05D006710 ORTHO05D008353 7.0e-75 284.6 237 64.6
ECA232G0378 Erigeron canadensis HOM05D006710 ORTHO05D008353 7.0e-75 284.6 191 73.3
VMungo0720G2835 Vigna mungo HOM05D006710 ORTHO05D008353 7.0e-75 284.6 178 76.4
Sed0009429 Sechium edule HOM05D006710 ORTHO05D008353 9.2e-75 284.3 259 61.0
BcaNung02465 Brassica carinata HOM05D006710 ORTHO05D008353 1.6e-74 283.5 249 60.6
Thhalv10004765m.g Eutrema salsugineum HOM05D006710 ORTHO05D008353 2.1e-74 283.1 249 60.6
FAN09G4503 Fragaria x ananassa HOM05D006710 ORTHO05D008353 1.0e-73 280.8 274 59.1
Migut.B01148 Erythranthe guttata HOM05D006710 ORTHO05D008353 1.3e-73 280.4 178 76.4
MBI19_g27535_MAGBIO Magnolia biondii HOM05D006710 ORTHO05D008353 1.7e-73 280.0 185 74.6
Sc09g0003360 Simmondsia chinensis HOM05D006710 ORTHO05D006029 3.0e-73 279.3 162 80.2
ClCG02G016080 Citrullus lanatus HOM05D006710 ORTHO05D008353 3.9e-73 278.9 248 60.9
Sp2g20620 Schrenkiella parvula HOM05D006710 ORTHO05D008353 5.1e-73 278.5 248 59.7
Ah.06g190140 Amaranthus hybridus HOM05D006710 ORTHO05D008353 6.6e-73 278.1 246 62.2
BcaNung04366 Brassica carinata HOM05D006710 ORTHO05D008353 1.1e-72 277.3 251 59.4
Phvul.007G182300 Phaseolus vulgaris HOM05D006710 ORTHO05D008353 1.5e-72 276.9 216 64.8
Lalb_Chr02g0148381 Lupinus albus HOM05D006710 ORTHO05D008353 1.9e-72 276.6 249 62.2
C07p40720 Brassica napus HOM05D006710 ORTHO05D008353 1.6e-71 273.5 261 58.6
BolC7t44600H Brassica oleracea HOM05D006710 ORTHO05D008353 1.6e-71 273.5 261 58.6
Ca_10089_v3 Cicer arietinum L. HOM05D006710 ORTHO05D008353 2.1e-71 273.1 213 65.7
Aqoxy2G03215 Aquilegia oxysepala HOM05D006710 ORTHO05D008353 3.6e-71 272.3 247 63.6
A06p37590 Brassica napus HOM05D006710 ORTHO05D008353 8.1e-71 271.2 259 58.7
FAN14G4294 Fragaria x ananassa HOM05D006710 ORTHO05D008353 5.2e-70 268.5 256 62.1
Hund07043 Selenicereus undatus HOM05D006710 ORTHO05D008353 3.4e-69 265.8 253 60.1
Os05g0401300 Oryza sativa ssp. japonica HOM05D006710 ORTHO05D008353 5.8e-69 265.0 179 69.3
ATR0626G338 Amborella trichopoda HOM05D006710 ORTHO05D008353 7.5e-69 264.6 229 60.7
Zm00001eb346790 Zea mays HOM05D006710 ORTHO05D008353 3.7e-68 262.3 251 55.8
Lj5g0024082 Lotus japonicus HOM05D006710 ORTHO05D008353 1.4e-67 260.4 240 59.6
HPP92_013667 Vanilla planifolia HOM05D006710 ORTHO05D008353 2.1e-66 256.5 243 56.8
PSO407G0185 Papaver somniferum HOM05D006710 ORTHO05D008353 6.0e-66 255.0 253 56.1
SGA_v2.0_scaffold244G44356 Striga asiatica HOM05D006710 ORTHO05D008353 7.8e-66 254.6 191 67.0
PSO170G1405 Papaver somniferum HOM05D006710 ORTHO05D008353 1.7e-65 253.4 252 56.3
Medtr1g082430 Medicago truncatula HOM05D006710 ORTHO05D008353 6.6e-65 251.5 213 58.7
Gohir.A11G262800 Gossypium hirsutum HOM05D006710 ORTHO05D008353 7.3e-64 248.1 204 61.8
Lsat_1_v5_gn_8_116001 Lactuca sativa HOM05D006710 ORTHO05D008353 7.3e-64 248.1 214 62.1
GSVIVG01000003001 Vitis vinifera HOM05D006710 ORTHO05D008353 4.7e-63 245.4 144 83.3
Psat6g148920 Pisum sativum HOM05D006710 ORTHO05D008353 1.4e-62 243.8 180 63.9
Aa31LG11G9170 Aethionema arabicum HOM05D006710 ORTHO05D008353 2.0e-61 240.0 274 51.5
TAR362G0522 Trochodendron aralioides HOM05D006710 ORTHO05D008353 3.8e-60 235.7 144 81.2
SEGI_09082 Sequoiadendron giganteum HOM05D006710 ORTHO05D008353 8.4e-60 234.6 176 61.9
BraA06t26678Z Brassica rapa HOM05D006710 ORTHO05D008353 3.2e-59 232.6 238 55.9
CDE02G4396 Ceratophyllum demersum HOM05D000137 ORTHO05D000503 2.3e-57 226.5 194 63.9
Glyma.20G231700 Glycine max HOM05D006710 ORTHO05D008353 8.7e-49 198.0 134 71.6
AagrBONN_evm.TU.Sc2ySwM_368.548 Anthoceros agrestis HOM05D006710 ORTHO05D008353 2.4e-46 189.9 185 49.7
FAN05G4701 Fragaria x ananassa HOM05D006710 ORTHO05D008353 2.0e-45 186.8 233 49.8
MELO3C004308.2 Cucumis melo HOM05D006710 ORTHO05D008353 1.7e-44 183.7 174 60.9
TPR.G327 Trifolium pratense HOM05D006710 ORTHO05D008353 6.4e-44 181.8 133 66.2
Mapoly0057s0090 Marchantia polymorpha HOM05D006710 ORTHO05D008353 2.3e-41 173.3 173 48.0
Pp3c11_21800 Physcomitrium patens HOM05D006710 ORTHO05D008353 3.9e-41 172.6 183 45.9
SMO356G0400 Selaginella moellendorffii HOM05D006710 ORTHO05D008353 7.4e-40 168.3 227 41.4
Cc02_g32640 Coffea canephora HOM05D006710 ORTHO05D008353 4.0e-38 162.5 95 83.2
DCAR_022246 Daucus carota HOM05D006710 ORTHO05D008353 2.0e-37 160.2 160 58.1
Cc02_g32660 Coffea canephora HOM05D006710 ORTHO05D008353 2.6e-37 159.8 145 64.1
FvH4_6g05310 Fragaria vesca HOM05D006710 ORTHO05D008353 5.8e-37 158.7 160 58.8
FAN02G1407 Fragaria x ananassa HOM05D006710 ORTHO05D008353 7.1e-27 125.2 132 53.8
EL10Ac7g17500 Beta vulgaris HOM05D006710 ORTHO05D008353 9.3e-27 124.8 96 65.6
Thecc.05G311300 Theobroma cacao HOM05D000126 ORTHO05D008353 7.4e-24 115.2 68 77.9
CBR_g32459 Chara braunii HOM05D000019 ORTHO05D000353 1.4e-14 84.3 177 29.9
MCO13G061 Micromonas commoda HOM05D006710 ORTHO05D008353 3.1e-14 83.2 132 33.3
Cre13.g564050 Chlamydomonas reinhardtii HOM05D006710 ORTHO05D008353 6.1e-10 68.9 139 30.9
PRCOL_00002748 Prasinoderma coloniale HOM05D006710 ORTHO05D008353 2.6e-08 63.5 128 32.0
Dinv22904 Davidia involucrata HOM05D006710 ORTHO05D008353 2.2e-07 60.5 62 48.4


User provided reference genes

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