Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G801.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-88 329.7 162 100.0
CAN.G1056.16 Capsicum annuum HOM05D005506 ORTHO05D004172 3.7e-64 248.4 170 74.7
CAN.G1177.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.0e-50 203.8 121 80.2
CAN.G129.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-47 193.0 121 79.3
CAN.G65.25 Capsicum annuum HOM05D005506 ORTHO05D004172 2.4e-47 192.6 122 73.8
CAN.G126.52 Capsicum annuum HOM05D005506 ORTHO05D004172 3.4e-46 188.7 121 75.2
CAN.G1038.18 Capsicum annuum HOM05D005506 ORTHO05D004172 1.9e-44 183.0 104 81.7
CAN.G1937.1 Capsicum annuum HOM05D005506 ORTHO05D004172 7.2e-44 181.0 121 71.1
CAN.G1669.5 Capsicum annuum HOM05D002496 ORTHO05D002787 1.4e-42 176.8 94 91.5
CAN.G66.2 Capsicum annuum HOM05D005506 ORTHO05D004172 2.8e-40 169.1 104 76.9
CAN.G1799.8 Capsicum annuum HOM05D005506 ORTHO05D004172 8.2e-40 167.5 95 85.3
CAN.G92.27 Capsicum annuum HOM05D005506 ORTHO05D004172 8.2e-40 167.5 121 68.6
CAN.G371.20 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-39 166.4 160 52.5
CAN.G164.13 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-35 153.7 118 64.4
CAN.G1437.3 Capsicum annuum HOM05D005506 ORTHO05D004172 2.0e-33 146.4 89 77.5
CAN.G101.1 Capsicum annuum HOM05D005506 ORTHO05D004172 5.7e-33 144.8 117 65.0
CAN.G22.18 Capsicum annuum HOM05D005506 ORTHO05D004172 4.8e-32 141.7 122 59.0
CAN.G1235.4 Capsicum annuum HOM05D000638 ORTHO05D000801 8.2e-32 141.0 121 58.7
CAN.G520.8 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-31 140.6 120 65.0
CAN.G1308.1 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-31 140.2 80 86.2
CAN.G156.11 Capsicum annuum HOM05D005506 ORTHO05D004172 4.5e-30 135.2 85 76.5
PGSC0003DMG400036799 Solanum tuberosum HOM05D005506 ORTHO05D004172 4.5e-30 135.2 121 57.0
CAN.G1824.2 Capsicum annuum HOM05D005506 ORTHO05D004172 5.0e-29 131.7 117 58.1
CAN.G170.72 Capsicum annuum HOM05D000327 ORTHO05D000218 1.1e-28 130.6 121 55.4
CAN.G1612.5 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-27 126.7 117 56.4
CAN.G194.25 Capsicum annuum HOM05D005506 ORTHO05D004172 1.6e-27 126.7 119 53.8
CAN.G954.3 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-26 123.2 69 85.5
CAN.G513.3 Capsicum annuum HOM05D005506 ORTHO05D004172 4.0e-26 122.1 122 51.6
CAN.G342.9 Capsicum annuum HOM05D005506 ORTHO05D004172 1.1e-25 120.6 123 50.4
CAN.G1127.3 Capsicum annuum HOM05D001217 ORTHO05D004172 2.0e-25 119.8 121 57.0
CAN.G7.16 Capsicum annuum HOM05D005506 ORTHO05D004172 2.0e-25 119.8 121 48.8
CAN.G836.54 Capsicum annuum HOM05D005506 ORTHO05D004172 2.6e-25 119.4 106 57.5
CAN.G767.51 Capsicum annuum HOM05D005506 ORTHO05D004172 5.7e-25 118.2 85 70.6
CAN.G170.30 Capsicum annuum HOM05D011038 ORTHO05D004172 1.7e-24 116.7 121 50.4
CAN.G123.4 Capsicum annuum HOM05D005506 ORTHO05D004172 2.2e-24 116.3 113 52.2
CAN.G695.1 Capsicum annuum HOM05D005506 ORTHO05D004172 4.8e-24 115.2 106 53.8
CAN.G1251.8 Capsicum annuum HOM05D005506 ORTHO05D004172 1.4e-23 113.6 106 53.8
PGSC0003DMG400037500 Solanum tuberosum HOM05D005506 ORTHO05D004172 2.4e-23 112.8 100 59.0
CAN.G2548.1 Capsicum annuum HOM05D005506 ORTHO05D004172 7.0e-23 111.3 106 52.8
CAN.G755.6 Capsicum annuum HOM05D005506 ORTHO05D004172 6.5e-21 104.8 82 61.0
CAN.G513.5 Capsicum annuum HOM05D005506 ORTHO05D004172 3.2e-20 102.4 97 49.5
CAN.G97.43 Capsicum annuum HOM05D005506 ORTHO05D004172 2.1e-19 99.8 100 50.0
CAN.G716.2 Capsicum annuum HOM05D005506 ORTHO05D004172 3.6e-19 99.0 96 53.1
CAN.G298.30 Capsicum annuum HOM05D005506 ORTHO05D004172 4.7e-19 98.6 95 52.6
CAN.G806.9 Capsicum annuum HOM05D011038 ORTHO05D004172 8.8e-18 94.4 106 48.1
CAN.G243.35 Capsicum annuum HOM05D005506 ORTHO05D004172 3.4e-17 92.4 110 42.7
CAN.G700.37 Capsicum annuum HOM05D011038 ORTHO05D004172 7.5e-17 91.3 93 47.3
CAN.G755.2 Capsicum annuum HOM05D005506 ORTHO05D004172 1.7e-16 90.1 99 47.5
CAN.G134.131 Capsicum annuum HOM05D005506 ORTHO05D004172 5.4e-15 85.1 68 60.3
CAN.G248.41 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-14 82.8 68 57.4
CAN.G1214.10 Capsicum annuum HOM05D005506 ORTHO05D004172 2.9e-13 79.3 111 42.3
CAN.G797.11 Capsicum annuum HOM05D005506 ORTHO05D004172 8.5e-13 77.8 63 55.6
PGSC0003DMG401009023 Solanum tuberosum HOM05D000017 ORTHO05D000013 1.1e-12 77.4 121 33.9
CAN.G101.9 Capsicum annuum HOM05D005506 ORTHO05D004172 1.5e-12 77.0 50 66.0
CAN.G153.9 Capsicum annuum HOM05D005506 ORTHO05D004172 2.5e-12 76.3 91 46.2
Sopen06g004040 Solanum pennellii HOM05D011490 ORTHO05D004172 4.2e-12 75.5 127 34.6
Sopen09g013570 Solanum pennellii HOM05D000017 ORTHO05D004172 1.6e-11 73.6 128 35.2
PGSC0003DMG400038069 Solanum tuberosum HOM05D000017 ORTHO05D004172 1.6e-11 73.6 129 35.7
TAR059G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.7e-11 72.8 122 33.6
TAR118G0002 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.7e-11 72.8 122 33.6
TAR286G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.7e-11 72.8 122 33.6
TAR445G0003 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.7e-11 72.8 122 33.6
TAR640G0005 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.7e-11 72.8 122 33.6
Nitab4.5_0001063g0060 Nicotiana tabacum HOM05D005506 ORTHO05D004172 8.0e-11 71.2 118 33.9
CAN.G989.1 Capsicum annuum HOM05D005506 ORTHO05D004172 4.0e-10 68.9 52 65.4
Sopen09g015940 Solanum pennellii HOM05D005506 ORTHO05D004172 4.0e-10 68.9 117 31.6
CANSAT56G3039 Cannabis sativa HOM05D000017 ORTHO05D000013 6.8e-10 68.2 120 34.2
CAN.G162.2 Capsicum annuum HOM05D005506 ORTHO05D004172 8.8e-10 67.8 44 68.2
BolC3t15495H Brassica oleracea HOM05D000017 ORTHO05D000013 1.2e-09 67.4 121 32.2
C03p31490 Brassica napus HOM05D000017 ORTHO05D000013 2.0e-09 66.6 121 32.2
Oeu010760.1 Olea europaea HOM05D000017 ORTHO05D000013 2.0e-09 66.6 155 32.3
PSO210G1360 Papaver somniferum HOM05D000017 ORTHO05D000013 2.0e-09 66.6 119 34.5
TAR651G0001 Trochodendron aralioides HOM05D000017 ORTHO05D000013 2.0e-09 66.6 122 30.3
PSO761G0585 Papaver somniferum HOM05D000017 ORTHO05D000013 3.4e-09 65.9 119 34.5
TWI18G0395 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 3.4e-09 65.9 147 27.9
THA.LOC104809906 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.4e-09 65.5 146 30.1
TWI18G0182 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 4.4e-09 65.5 120 31.7
CAN.G861.45 Capsicum annuum HOM05D005506 ORTHO05D004172 5.7e-09 65.1 36 86.1
Oeu044755.1 Olea europaea HOM05D000017 ORTHO05D000013 7.5e-09 64.7 155 31.6
CANSAT11G1978 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-09 64.3 112 35.7
CANSAT56G0827 Cannabis sativa HOM05D000017 ORTHO05D000013 9.8e-09 64.3 121 33.1
CAN.G1007.22 Capsicum annuum HOM05D005506 ORTHO05D004172 1.3e-08 63.9 42 64.3
Oeu007458.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-08 63.9 155 31.6
Oeu009394.1 Olea europaea HOM05D000017 ORTHO05D000013 1.3e-08 63.9 158 29.7
CANSAT01G0559 Cannabis sativa HOM05D000017 ORTHO05D000013 2.2e-08 63.2 128 35.2
TWI12G1375 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-08 63.2 121 31.4
TWI38G2350 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-08 63.2 121 31.4
TWI53G1455 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.2e-08 63.2 121 31.4
Atru.chr1.2128 Acer truncatum HOM05D000017 ORTHO05D000013 2.8e-08 62.8 122 29.5
Atru.chr3.3659 Acer truncatum HOM05D000017 ORTHO05D000013 2.8e-08 62.8 122 28.7
Sopen08g006280 Solanum pennellii HOM05D000017 ORTHO05D004172 2.8e-08 62.8 103 32.0
THA.LOC104817109 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.8e-08 62.8 127 32.3
TWI77G0713 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.8e-08 62.8 147 27.2
THA.LOC104825417 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 3.7e-08 62.4 127 31.5
Oeu062688.1 Olea europaea HOM05D000017 ORTHO05D000013 4.9e-08 62.0 147 31.3
CANSAT78G2408 Cannabis sativa HOM05D000017 ORTHO05D000013 6.3e-08 61.6 129 32.6
MBI16_g32381_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 8.3e-08 61.2 122 27.9
Oeu039924.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-07 60.8 123 33.3
Oeu060282.1 Olea europaea HOM05D000017 ORTHO05D000013 1.1e-07 60.8 119 32.8
THA.LOC104810610 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.4e-07 60.5 125 31.2
A04p22200 Brassica napus HOM05D000017 ORTHO05D000013 1.8e-07 60.1 121 30.6
CAN.G404.40 Capsicum annuum HOM05D000017 ORTHO05D004172 1.8e-07 60.1 109 30.3
CAN.G78.32 Capsicum annuum HOM05D005506 ORTHO05D004172 1.8e-07 60.1 55 54.5
Oeu026648.1 Olea europaea HOM05D000017 ORTHO05D000013 1.8e-07 60.1 123 32.5
Atru.chr2.2585 Acer truncatum HOM05D000017 ORTHO05D000013 2.4e-07 59.7 120 30.8
TWI34G0976 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.4e-07 59.7 121 29.8
TWI53G1435 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.4e-07 59.7 121 29.8
TWI75G1027 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 2.4e-07 59.7 121 29.8
Oeu007867.1 Olea europaea HOM05D000017 ORTHO05D000013 3.1e-07 59.3 123 32.5
Oeu028795.1 Olea europaea HOM05D000017 ORTHO05D000013 3.1e-07 59.3 171 29.8
MBI01_g04524_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.1e-07 58.9 120 29.2
MBI15_g09754_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 4.1e-07 58.9 123 30.9
THA.LOC104825704 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 4.1e-07 58.9 126 29.4
CANSAT21G0624 Cannabis sativa HOM05D000017 ORTHO05D000013 5.4e-07 58.5 120 35.0
CAN.G1093.5 Capsicum annuum HOM05D005506 ORTHO05D004172 5.4e-07 58.5 32 84.4
Oeu009175.1 Olea europaea HOM05D000017 ORTHO05D000013 5.4e-07 58.5 120 32.5
THA.LOC104803415 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.4e-07 58.5 128 29.7
THA.LOC104810570 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.4e-07 58.5 126 29.4
THA.LOC104815186 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 5.4e-07 58.5 127 27.6
C06p10560 Brassica napus HOM05D000017 ORTHO05D000013 7.0e-07 58.2 120 29.2
CAN.G1014.53 Capsicum annuum HOM05D000261 ORTHO05D004172 7.0e-07 58.2 43 62.8
Oeu018168.1 Olea europaea HOM05D000017 ORTHO05D000013 7.0e-07 58.2 121 30.6
Rhsim13G0031700 Rhododendron simsii HOM05D000017 ORTHO05D000013 7.0e-07 58.2 121 30.6
THA.LOC104801857 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 7.0e-07 58.2 126 29.4
ATR0665G260 Amborella trichopoda HOM05D000017 ORTHO05D000013 9.2e-07 57.8 121 30.6
CAN.G1199.8 Capsicum annuum HOM05D005506 ORTHO05D004172 9.2e-07 57.8 36 80.6
MBI16_g35342_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 9.2e-07 57.8 120 29.2
CAN.G502.24 Capsicum annuum HOM05D005506 ORTHO05D004172 1.2e-06 57.4 32 81.2
MBI18_g18052_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 121 28.1
Rhsim12G0074300 Rhododendron simsii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 121 30.6
THA.LOC104809156 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 1.2e-06 57.4 120 30.8
TWI18G0050 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.2e-06 57.4 120 26.7
Oeu021079.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 122 28.7
Oeu034772.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 123 30.9
Oeu058708.1 Olea europaea HOM05D000017 ORTHO05D000013 1.6e-06 57.0 121 29.8
TWI39G0084 Tripterygium wilfordii HOM05D000017 ORTHO05D000013 1.6e-06 57.0 115 29.6
CAN.G1313.2 Capsicum annuum HOM05D005506 ORTHO05D004172 2.0e-06 56.6 34 79.4
THA.LOC104815434 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.0e-06 56.6 156 27.6
Atru.chr1.2169 Acer truncatum HOM05D000017 ORTHO05D000013 2.7e-06 56.2 120 30.8
BolC9t55634H Brassica oleracea HOM05D008389 ORTHO05D043201 2.7e-06 56.2 122 31.1
CAN.G809.55 Capsicum annuum HOM05D005506 ORTHO05D004172 2.7e-06 56.2 36 72.2
THA.LOC109116550 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 2.7e-06 56.2 123 30.9
Atru.chr1.3548 Acer truncatum HOM05D000017 ORTHO05D000013 3.5e-06 55.8 121 26.4
Atru.chr9.32 Acer truncatum HOM05D000017 ORTHO05D000013 3.5e-06 55.8 121 26.4
BraA10t43804Z Brassica rapa HOM05D008389 ORTHO05D010630 3.5e-06 55.8 122 31.1
CAN.G577.10 Capsicum annuum HOM05D000061 ORTHO05D004172 3.5e-06 55.8 42 57.1
MBI16_g37198_MAGBIO Magnolia biondii HOM05D000017 ORTHO05D000013 3.5e-06 55.8 121 27.3
Atru.chr9.269 Acer truncatum HOM05D000017 ORTHO05D000013 4.5e-06 55.5 121 25.6
Atru.chr9.574 Acer truncatum HOM05D000017 ORTHO05D000013 4.5e-06 55.5 120 30.8
Oeu008255.1 Olea europaea HOM05D000017 ORTHO05D000013 4.5e-06 55.5 119 30.3
Sopen02g009890 Solanum pennellii HOM05D005506 ORTHO05D004172 4.5e-06 55.5 48 56.2
Atru.chr1.1594 Acer truncatum HOM05D000017 ORTHO05D000013 5.9e-06 55.1 121 27.3
Atru.chr11.706 Acer truncatum HOM05D000017 ORTHO05D000013 5.9e-06 55.1 121 22.3
C04p57210 Brassica napus HOM05D000017 ORTHO05D000013 5.9e-06 55.1 120 30.0
Hma1.2p1_0172F.1_g076350 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 5.9e-06 55.1 121 29.8
Lj9P664T34 Lonicera japonica HOM05D000017 ORTHO05D000013 5.9e-06 55.1 121 28.9
Oeu005507.1 Olea europaea HOM05D000017 ORTHO05D000013 5.9e-06 55.1 155 28.4
Rhsim01G0268100 Rhododendron simsii HOM05D000017 ORTHO05D000013 5.9e-06 55.1 121 29.8
Hma1.2p1_1029F.1_g249745 Hydrangea macrophylla HOM05D000017 ORTHO05D000013 7.7e-06 54.7 121 28.9
Oeu041491.1 Olea europaea HOM05D000017 ORTHO05D000013 7.7e-06 54.7 121 28.9
THA.LOC104810148 Tarenaya hassleriana HOM05D000017 ORTHO05D000013 7.7e-06 54.7 125 28.8


User provided reference genes

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