Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8.41 Capsicum annuum HOM05D007440 ORTHO05D009418 1.0e-128 463.4 227 100.0
Nitab4.5_0000219g0060 Nicotiana tabacum HOM05D007440 ORTHO05D009418 2.8e-70 269.2 219 65.3
Solyc12g017690.3 Solanum lycopersicum HOM05D007440 ORTHO05D009418 8.2e-70 267.7 218 63.8
Sopen12g008470 Solanum pennellii HOM05D007440 ORTHO05D009418 1.8e-69 266.5 218 63.8
CSS0017361 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 1.9e-58 229.9 215 54.9
Dinv41796 Davidia involucrata HOM05D007440 ORTHO05D009418 3.6e-57 225.7 220 54.5
Hma1.2p1_0708F.1_g207100 Hydrangea macrophylla HOM05D007440 ORTHO05D009418 1.0e-56 224.2 214 53.7
Actinidia29398 Actinidia chinensis HOM05D007440 ORTHO05D009418 3.0e-56 222.6 216 53.2
Oeu061891.1 Olea europaea HOM05D007440 ORTHO05D009418 3.0e-56 222.6 214 54.7
Thecc.08G172800 Theobroma cacao HOM05D007440 ORTHO05D009418 1.1e-55 220.7 215 52.6
Ciclev10024582m.g Citrus clementina HOM05D007440 ORTHO05D009418 1.5e-55 220.3 210 54.8
Cpa.g.sc21.56 Carica papaya HOM05D007440 ORTHO05D009418 2.0e-55 219.9 216 53.2
CiPaw.03G017000 Carya illinoinensis HOM05D007440 ORTHO05D009418 2.0e-55 219.9 217 53.5
Manes.18G121350 Manihot esculenta HOM05D007440 ORTHO05D009418 5.7e-55 218.4 215 54.0
Atru.chr12.1704 Acer truncatum HOM05D007440 ORTHO05D009418 1.7e-54 216.9 199 55.3
Nn1g02997 Nelumbo nucifera HOM05D007440 ORTHO05D009418 1.7e-54 216.9 221 52.9
TAR381G0685 Trochodendron aralioides HOM05D007440 ORTHO05D009418 4.8e-54 215.3 215 52.1
Cfa008111 Carpinus fangiana HOM05D007440 ORTHO05D009418 2.4e-53 213.0 214 52.8
Rhsim02G0174300 Rhododendron simsii HOM05D007440 ORTHO05D009418 2.4e-53 213.0 218 51.4
GSVIVG01036437001 Vitis vinifera HOM05D007440 ORTHO05D009418 2.4e-53 213.0 216 52.8
FAN18G0056 Fragaria x ananassa HOM05D007440 ORTHO05D009418 4.1e-53 212.2 216 52.8
Potri.019G076200 Populus trichocarpa HOM05D007440 ORTHO05D009418 6.9e-53 211.5 214 51.4
Cc03_g16220 Coffea canephora HOM05D007440 ORTHO05D009418 9.1e-53 211.1 214 50.9
HanXRQChr02g0037061 Helianthus annuus HOM05D007440 ORTHO05D009418 1.5e-52 210.3 215 51.2
RcHm_v2.0_Chr7g0224381 Rosa chinensis HOM05D007440 ORTHO05D009418 2.6e-52 209.5 213 52.6
Eucgr.H00023 Eucalyptus grandis HOM05D007440 ORTHO05D009418 3.4e-52 209.1 215 50.2
RcHm_v2.0_Chr7g0230881 Rosa chinensis HOM05D007440 ORTHO05D009418 4.5e-52 208.8 214 52.3
Lsat_1_v5_gn_1_25281 Lactuca sativa HOM05D007440 ORTHO05D009418 5.9e-52 208.4 217 50.7
QL09p004054 Quercus lobata HOM05D007440 ORTHO05D009418 7.7e-52 208.0 215 51.2
Migut.N03008 Erythranthe guttata HOM05D007440 ORTHO05D009418 1.0e-51 207.6 216 49.1
Sabra19G0086600 Salix brachista HOM05D007440 ORTHO05D009418 1.0e-51 207.6 224 49.1
Lj9C701T14 Lonicera japonica HOM05D007440 ORTHO05D009418 2.2e-51 206.5 200 55.0
MD15G1399400 Malus domestica HOM05D007440 ORTHO05D009418 2.2e-51 206.5 214 52.3
arahy.Tifrunner.gnm1.ann1.E07HZ8 Arachis hypogaea HOM05D007440 ORTHO05D009418 3.8e-51 205.7 215 48.8
PGR031G3126 Punica granatum HOM05D007440 ORTHO05D009418 3.8e-51 205.7 214 51.4
arahy.Tifrunner.gnm1.ann1.YQ4984 Arachis hypogaea HOM05D007440 ORTHO05D009418 5.0e-51 205.3 215 48.8
SalBow6G1672 Salvia bowleyana HOM05D007440 ORTHO05D009418 5.0e-51 205.3 215 51.2
MELO3C008079.2 Cucumis melo HOM05D007440 ORTHO05D009418 6.5e-51 204.9 210 51.0
Gohir.D05G254100 Gossypium hirsutum HOM05D007440 ORTHO05D009418 8.5e-51 204.5 203 51.7
Gorai.009G265700 Gossypium raimondii HOM05D007440 ORTHO05D009418 8.5e-51 204.5 203 51.7
Aqoxy6G00075 Aquilegia oxysepala HOM05D007440 ORTHO05D009418 1.4e-50 203.8 213 49.8
ClCG11G008830 Citrullus lanatus HOM05D007440 ORTHO05D009418 1.4e-50 203.8 210 50.5
Ca_12759_v3 Cicer arietinum L. HOM05D007440 ORTHO05D009418 1.9e-50 203.4 208 49.5
Sed0012539 Sechium edule HOM05D007440 ORTHO05D009418 3.2e-50 202.6 210 49.5
ECA247G2087 Erigeron canadensis HOM05D007440 ORTHO05D009418 4.2e-50 202.2 252 44.0
Aa31LG4G9050 Aethionema arabicum HOM05D007440 ORTHO05D009418 5.5e-50 201.8 207 49.8
Lalb_Chr17g0336871 Lupinus albus HOM05D007440 ORTHO05D009418 5.5e-50 201.8 215 47.9
TWI23G1187 Tripterygium wilfordii HOM05D007440 ORTHO05D009418 5.5e-50 201.8 213 51.6
CsaV3_2G033090 Cucumis sativus L. HOM05D007440 ORTHO05D009418 7.2e-50 201.4 210 50.0
Glyma.13G000800 Glycine max HOM05D007440 ORTHO05D009418 7.2e-50 201.4 208 48.6
Gohir.A05G252301 Gossypium hirsutum HOM05D007440 ORTHO05D009418 9.4e-50 201.1 203 50.7
TPR.G34135 Trifolium pratense HOM05D007440 ORTHO05D009418 9.4e-50 201.1 225 46.7
Hund26630 Selenicereus undatus HOM05D007440 ORTHO05D009418 2.1e-49 199.9 220 48.6
CANSAT25G0816 Cannabis sativa HOM05D007440 ORTHO05D009418 3.6e-49 199.1 208 51.0
PSO170G3813 Papaver somniferum HOM05D007440 ORTHO05D009418 4.7e-49 198.7 223 47.1
FAN08G1847 Fragaria x ananassa HOM05D007440 ORTHO05D009418 7.9e-49 198.0 245 45.3
Phvul.011G216600 Phaseolus vulgaris HOM05D007440 ORTHO05D009418 1.0e-48 197.6 208 49.5
Psat7g227720 Pisum sativum HOM05D007440 ORTHO05D009418 1.0e-48 197.6 208 49.0
Lj3g0019924 Lotus japonicus HOM05D007440 ORTHO05D009418 1.8e-48 196.8 208 47.6
Medtr4g031180 Medicago truncatula HOM05D007440 ORTHO05D009418 5.1e-48 195.3 208 48.1
HPP92_004660 Vanilla planifolia HOM05D007440 ORTHO05D009418 5.1e-48 195.3 213 49.8
Nitab4.5_0006566g0010 Nicotiana tabacum HOM05D007440 ORTHO05D009418 8.8e-48 194.5 192 57.8
ATR1089G110 Amborella trichopoda HOM05D007440 ORTHO05D009418 4.4e-47 192.2 213 46.5
Zm00001eb026400 Zea mays HOM05D007440 ORTHO05D009418 4.4e-47 192.2 185 52.4
SGA_v2.0_scaffold19G08914 Striga asiatica HOM05D007440 ORTHO05D009418 9.7e-47 191.0 259 40.9
Haze_13927 Corylus avellana HOM05D007440 ORTHO05D009418 3.7e-46 189.1 206 51.0
PGSC0003DMG402002240 Solanum tuberosum HOM05D007440 ORTHO05D009418 6.3e-46 188.3 176 58.0
THA.LOC104810378 Tarenaya hassleriana HOM05D007440 ORTHO05D009418 8.2e-46 188.0 203 46.8
Peaxi162Scf00017g00002 Petunia axillaris HOM05D007440 ORTHO05D009418 1.5e-44 183.7 183 57.9
FAN04G2515 Fragaria x ananassa HOM05D007440 ORTHO05D009418 4.5e-44 182.2 194 50.5
Os10g0141900 Oryza sativa ssp. japonica HOM05D007440 ORTHO05D009418 2.5e-42 176.4 221 43.0
CDE05G2917 Ceratophyllum demersum HOM05D007440 ORTHO05D009418 3.6e-41 172.6 208 46.2
Lsat_1_v5_gn_7_9441 Lactuca sativa HOM05D007440 ORTHO05D009418 1.0e-40 171.0 215 45.6
Prupe.1G546900 Prunus persica HOM05D007440 ORTHO05D009418 2.0e-36 156.8 169 50.3
FvH4_5g32910 Fragaria vesca HOM05D007440 ORTHO05D009418 5.9e-36 155.2 179 46.4
Mapoly0046s0064 Marchantia polymorpha HOM05D007440 ORTHO05D009418 5.9e-36 155.2 227 38.8
vmacro11038 Vaccinium macrocarpon HOM05D007440 ORTHO05D009418 1.1e-34 151.0 209 43.5
CSS0018984 Camellia sinensis var. sinensis HOM05D007440 ORTHO05D009418 1.0e-32 144.4 125 60.0
AagrBONN_evm.TU.Sc2ySwM_362.1381 Anthoceros agrestis HOM05D007440 ORTHO05D009418 1.5e-31 140.6 229 35.8
DCAR_002184 Daucus carota HOM05D007440 ORTHO05D004363 1.3e-30 137.5 217 39.6
Pp3c17_10270 Physcomitrium patens HOM05D007440 ORTHO05D009418 4.1e-29 132.5 210 37.6
SMO347G0497 Selaginella moellendorffii HOM05D007440 ORTHO05D009418 2.9e-27 126.3 181 38.7
Pp3c9_24070 Physcomitrium patens HOM05D007440 ORTHO05D009418 1.6e-25 120.6 213 34.3
PRCOL_00006364 Prasinoderma coloniale HOM05D007440 ORTHO05D009418 1.8e-24 117.1 211 32.7
Glyma.08G367700 Glycine max HOM05D007440 ORTHO05D009418 5.2e-24 115.5 74 70.3
MBI03_g14514_MAGBIO Magnolia biondii HOM05D007440 ORTHO05D009418 9.8e-23 111.3 70 72.9
CBR_g29696 Chara braunii HOM05D007440 ORTHO05D009418 1.8e-21 107.1 289 27.7
PSO782G5381 Papaver somniferum HOM05D007440 ORTHO05D009418 3.1e-21 106.3 74 66.2
SEGI_15929 Sequoiadendron giganteum HOM05D007440 ORTHO05D009418 5.6e-18 95.5 66 63.6
Duzib177G0102 Durio zibethinus HOM05D007440 ORTHO05D009418 8.9e-16 88.2 55 70.9
ECA247G2990 Erigeron canadensis HOM05D007440 ORTHO05D009418 8.9e-16 88.2 63 61.9
Cre10.g451000 Chlamydomonas reinhardtii HOM05D007440 ORTHO05D009418 2.6e-15 86.7 76 52.6
MCO13G519 Micromonas commoda HOM05D007440 ORTHO05D009418 2.6e-15 86.7 262 27.1
Prupe.1G523100 Prunus persica HOM05D006997 ORTHO05D008713 1.0e-11 74.7 181 28.2
MD08G1188600 Malus domestica HOM05D006997 ORTHO05D008713 1.7e-11 73.9 181 26.5
Pp3c2_7910 Physcomitrium patens HOM05D006997 ORTHO05D008713 3.0e-11 73.2 181 26.0
Atru.chr13.1117 Acer truncatum HOM05D006997 ORTHO05D008713 1.5e-10 70.9 181 27.6
MELO3C003553.2 Cucumis melo HOM05D006997 ORTHO05D008713 1.5e-10 70.9 181 27.1
CsaV3_3G047700 Cucumis sativus L. HOM05D006997 ORTHO05D008713 1.5e-10 70.9 181 26.5
RcHm_v2.0_Chr3g0492071 Rosa chinensis HOM05D006997 ORTHO05D008713 1.5e-10 70.9 181 27.1
Lalb_Chr08g0242211 Lupinus albus HOM05D006997 ORTHO05D008713 1.9e-10 70.5 184 26.1
FvH4_5g36560 Fragaria vesca HOM05D006997 ORTHO05D008713 2.5e-10 70.1 181 27.1
Lj1g0014637 Lotus japonicus HOM05D006997 ORTHO05D008713 2.5e-10 70.1 187 26.7
FAN13G2131 Fragaria x ananassa HOM05D006997 ORTHO05D008713 7.3e-10 68.6 176 27.3
FAN18G0565 Fragaria x ananassa HOM05D006997 ORTHO05D008713 7.3e-10 68.6 176 27.3
DCAR_012882 Daucus carota HOM05D006997 ORTHO05D008713 9.5e-10 68.2 168 26.8
Mapoly0028s0040 Marchantia polymorpha HOM05D006997 ORTHO05D008713 9.5e-10 68.2 181 24.9
FAN08G2563 Fragaria x ananassa HOM05D006997 ORTHO05D008713 2.1e-09 67.0 176 26.7
QL02p002364 Quercus lobata HOM05D006997 ORTHO05D008713 2.8e-09 66.6 181 26.0
Hund26989 Selenicereus undatus HOM05D006997 ORTHO05D008713 2.8e-09 66.6 181 25.4
PSO170G4713 Papaver somniferum HOM05D006997 ORTHO05D008713 3.6e-09 66.2 176 25.0
PSO700G0253 Papaver somniferum HOM05D006997 ORTHO05D008713 3.6e-09 66.2 176 25.0
CiPaw.15G045900 Carya illinoinensis HOM05D006997 ORTHO05D008713 4.7e-09 65.9 181 26.0
Haze_18264 Corylus avellana HOM05D006997 ORTHO05D008713 8.0e-09 65.1 176 25.6
CSS0033006 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.0e-08 64.7 176 26.1
CSS0036565 Camellia sinensis var. sinensis HOM05D006997 ORTHO05D008713 1.0e-08 64.7 176 26.1
PSO447G0258 Papaver somniferum HOM05D006997 ORTHO05D008713 1.0e-08 64.7 175 24.6
THA.LOC104806793 Tarenaya hassleriana HOM05D006997 ORTHO05D008713 1.0e-08 64.7 182 25.8
Atru.chr13.2418 Acer truncatum HOM05D007440 ORTHO05D009418 2.3e-08 63.5 115 37.4
SalBow1G8133 Salvia bowleyana HOM05D006997 ORTHO05D008713 3.1e-08 63.2 179 25.1
AagrBONN_evm.TU.Sc2ySwM_228.3329 Anthoceros agrestis HOM05D006997 ORTHO05D008713 1.2e-07 61.2 182 24.7
MD15G1376400 Malus domestica HOM05D006997 ORTHO05D008713 3.4e-07 59.7 156 26.3
ClCG11G014320 Citrullus lanatus HOM05D006997 ORTHO05D008713 1.7e-06 57.4 151 25.8
Cre12.g558400 Chlamydomonas reinhardtii HOM05D006997 ORTHO05D008713 3.7e-06 56.2 187 22.5


User provided reference genes

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