Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G8.25 Capsicum annuum HOM05D001750 ORTHO05D001825 1.1e-24 115.9 61 100.0
CAN.G1045.16 Capsicum annuum HOM05D001750 ORTHO05D001825 1.3e-22 109.0 60 93.3
CAN.G134.7 Capsicum annuum HOM05D001750 ORTHO05D001825 1.3e-22 109.0 60 93.3
CAN.G1431.3 Capsicum annuum HOM05D001750 ORTHO05D001825 1.3e-22 109.0 60 93.3
CAN.G413.7 Capsicum annuum HOM05D001750 ORTHO05D001825 1.3e-22 109.0 60 93.3
CAN.G1526.5 Capsicum annuum HOM05D001750 ORTHO05D001825 6.5e-22 106.7 60 91.7
Solyc01g017090.2 Solanum lycopersicum HOM05D001750 ORTHO05D001825 3.9e-19 97.4 60 85.0
HanXRQChr00c0289g0573101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr01g0020101 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr02g0059681 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr05g0152401 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr06g0182971 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr08g0212841 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr09g0258551 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQChr11g0323711 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
HanXRQCPg0580391 Helianthus annuus HOM05D001750 ORTHO05D001825 1.1e-18 95.9 60 83.3
Solyc03g013620.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 5.7e-18 93.6 60 81.7
DCAR_032533 Daucus carota HOM05D001750 ORTHO05D001825 7.4e-18 93.2 60 80.0
HanXRQChr17g0557801 Helianthus annuus HOM05D001750 ORTHO05D001825 7.4e-18 93.2 58 81.0
PGR111G0046 Punica granatum HOM05D001750 ORTHO05D001825 9.7e-18 92.8 60 80.0
Lj2P1238T72 Lonicera japonica HOM05D001750 ORTHO05D001825 2.2e-17 91.7 60 78.3
Potri.001G342933 Populus trichocarpa HOM05D001750 ORTHO05D001825 1.1e-16 89.4 60 76.7
Eucgr.B00850 Eucalyptus grandis HOM05D001750 ORTHO05D001825 1.8e-16 88.6 60 76.7
Medtr0002s0200 Medicago truncatula HOM05D001750 ORTHO05D001825 1.8e-16 88.6 60 71.7
Nn064s42216 Nelumbo nucifera HOM05D001750 ORTHO05D001825 2.4e-16 88.2 60 75.0
EL10As15g24136 Beta vulgaris HOM05D001750 ORTHO05D001825 1.5e-15 85.5 58 74.1
Sed0000095 Sechium edule HOM05D001750 ORTHO05D001825 1.5e-15 85.5 60 73.3
MELO3C027417.2 Cucumis melo HOM05D001750 ORTHO05D001825 2.0e-15 85.1 60 73.3
Gohir.A04G039195 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.0e-15 85.1 60 75.0
Gohir.A02G134105 Gossypium hirsutum HOM05D001750 ORTHO05D001825 2.6e-15 84.7 60 75.0
Gohir.1Z049579 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.4e-15 84.3 60 75.0
Gohir.1Z049581 Gossypium hirsutum HOM05D001750 ORTHO05D001825 3.4e-15 84.3 60 75.0
PSO548G0117 Papaver somniferum HOM05D001750 ORTHO05D001825 3.4e-15 84.3 59 74.6
Potri.011G084150 Populus trichocarpa HOM05D001750 ORTHO05D001825 3.4e-15 84.3 60 73.3
SalBow1G5472 Salvia bowleyana HOM05D001750 ORTHO05D001825 3.4e-15 84.3 58 75.9
Medtr4g006150 Medicago truncatula HOM05D001750 ORTHO05D001825 1.7e-14 82.0 60 75.0
Medtr4g051300 Medicago truncatula HOM05D001750 ORTHO05D001825 1.7e-14 82.0 60 75.0
Medtr7g021740 Medicago truncatula HOM05D001750 ORTHO05D001825 1.7e-14 82.0 60 75.0
RcHm_v2.0_CPg0502851 Rosa chinensis HOM05D001750 ORTHO05D001825 2.9e-14 81.3 60 68.3
ATCG01010 Arabidopsis thaliana HOM05D001750 ORTHO05D001825 3.8e-14 80.9 60 73.3
AL7G50350 Arabidopsis lyrata HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BraSC103t45424Z Brassica rapa HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BraSC138t45539Z Brassica rapa HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BraSC143t45665Z Brassica rapa HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BraSC25t45905Z Brassica rapa HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BraSC59t46546Z Brassica rapa HOM05D001750 ORTHO05D001825 6.5e-14 80.1 60 71.7
BolSC29t60501H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
BolSC37t60789H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
BolSC44t60818H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
BolSC45t60914H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
BolSC46t60963H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
BolSC49t61138H Brassica oleracea HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 71.7
FvH4_c3g00021 Fragaria vesca HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 65.0
Gohir.D13G020450 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.9e-13 78.6 60 70.0
Lalb_Chr03g0039401 Lupinus albus HOM05D001750 ORTHO05D001825 2.5e-13 78.2 60 70.0
Lalb_Chr07g0191711 Lupinus albus HOM05D001750 ORTHO05D001825 2.5e-13 78.2 60 70.0
LjContig00318g0010147 Lotus japonicus HOM05D001750 ORTHO05D001825 5.5e-13 77.0 60 70.0
LjContig00319g0009462 Lotus japonicus HOM05D001750 ORTHO05D001825 5.5e-13 77.0 60 70.0
Gorai.013G022800 Gossypium raimondii HOM05D001750 ORTHO05D001825 2.7e-12 74.7 59 66.1
arahy.Tifrunner.gnm1.ann1.5P7K6N Arachis hypogaea HOM05D001750 ORTHO05D001825 4.6e-12 73.9 61 68.9
arahy.Tifrunner.gnm1.ann1.B6WU7N Arachis hypogaea HOM05D001750 ORTHO05D001825 4.6e-12 73.9 61 68.9
BolC6t36206H Brassica oleracea HOM05D001750 ORTHO05D001825 4.6e-12 73.9 66 65.2
Solyc11g021195.1 Solanum lycopersicum HOM05D001750 ORTHO05D001825 4.6e-12 73.9 43 88.4
HanXRQChr00c0718g0577001 Helianthus annuus HOM05D001750 ORTHO05D001825 4.4e-10 67.4 37 86.5
PGSC0003DMG400020529 Solanum tuberosum HOM05D000729 ORTHO05D001063 4.4e-10 67.4 53 75.5
Gohir.D02G112150 Gossypium hirsutum HOM05D001750 ORTHO05D001825 1.3e-09 65.9 47 70.2
Lalb_Chr16g0388561 Lupinus albus HOM05D001750 ORTHO05D001825 1.7e-09 65.5 47 68.1
Gorai.006G035300 Gossypium raimondii HOM05D001750 ORTHO05D001825 4.8e-09 63.9 60 60.0


User provided reference genes

Program Settings