Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G798.53 Capsicum annuum HOM05D007616 ORTHO05D008751 1.7e-118 429.5 241 100.0
PGSC0003DMG400024897 Solanum tuberosum HOM05D007616 ORTHO05D008751 6.2e-92 341.3 241 79.7
Nitab4.5_0000948g0040 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.0e-86 322.4 249 72.3
Nitab4.5_0002596g0080 Nicotiana tabacum HOM05D007616 ORTHO05D008751 3.0e-86 322.4 255 71.8
Peaxi162Scf00011g00934 Petunia axillaris HOM05D007616 ORTHO05D008751 1.5e-82 310.1 258 71.7
Solyc01g103700.3 Solanum lycopersicum HOM05D007616 ORTHO05D008751 1.4e-80 303.5 242 74.8
Sopen01g046110 Solanum pennellii HOM05D007616 ORTHO05D008751 2.5e-77 292.7 242 71.9
Oeu000131.1 Olea europaea HOM05D007616 ORTHO05D008751 1.4e-43 180.6 235 51.9
Cc02_g23010 Coffea canephora HOM05D007616 ORTHO05D008751 1.7e-41 173.7 247 50.6
DCAR_025356 Daucus carota HOM05D007616 ORTHO05D008751 3.8e-41 172.6 236 46.6
COL.COLO4_17740 Corchorus olitorius HOM05D007616 ORTHO05D008751 5.1e-38 162.2 249 44.6
Gohir.A01G182700 Gossypium hirsutum HOM05D007616 ORTHO05D008751 2.2e-36 156.8 242 43.0
Gohir.D01G173800 Gossypium hirsutum HOM05D007616 ORTHO05D008751 1.4e-35 154.1 247 43.3
Gorai.002G215900 Gossypium raimondii HOM05D007616 ORTHO05D008751 1.4e-35 154.1 247 43.3
Thecc.02G023400 Theobroma cacao HOM05D007616 ORTHO05D008751 1.8e-35 153.7 251 42.6
Potri.004G222800 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.1e-35 152.9 245 42.9
Potri.003G009400 Populus trichocarpa HOM05D007616 ORTHO05D008751 2.0e-34 150.2 246 43.1
Atru.chr4.2705 Acer truncatum HOM05D007616 ORTHO05D008751 4.5e-34 149.1 241 43.6
Eucgr.I02753 Eucalyptus grandis HOM05D007616 ORTHO05D008751 5.9e-34 148.7 248 44.0
FAN14G2995 Fragaria x ananassa HOM05D007616 ORTHO05D008751 7.7e-34 148.3 248 43.1
Manes.10G119800 Manihot esculenta HOM05D007616 ORTHO05D008751 7.7e-34 148.3 239 43.5
FvH4_6g51930 Fragaria vesca HOM05D007616 ORTHO05D008751 1.0e-33 147.9 248 43.1
QL02p100178 Quercus lobata HOM05D007616 ORTHO05D008751 1.0e-33 147.9 262 39.7
MSTRG.20315 Avicennia marina HOM05D007616 ORTHO05D008751 8.5e-33 144.8 250 42.8
FAN09G2205 Fragaria x ananassa HOM05D007616 ORTHO05D008751 3.2e-32 142.9 254 41.3
CANSAT54G0672 Cannabis sativa HOM05D007616 ORTHO05D008751 2.1e-31 140.2 229 44.5
Duzib132G0975 Durio zibethinus HOM05D007616 ORTHO05D008751 4.6e-31 139.0 228 43.0
CiPaw.05G005800 Carya illinoinensis HOM05D007616 ORTHO05D008751 6.1e-31 138.7 236 41.9
Sabra03G0004800 Salix brachista HOM05D007616 ORTHO05D008751 1.4e-30 137.5 237 46.8
arahy.Tifrunner.gnm1.ann1.D7HVAZ Arachis hypogaea HOM05D007616 ORTHO05D008751 1.8e-30 137.1 242 43.8
Prupe.1G577200 Prunus persica HOM05D007616 ORTHO05D008751 1.8e-30 137.1 249 43.4
RcHm_v2.0_Chr2g0173411 Rosa chinensis HOM05D007616 ORTHO05D008751 5.1e-30 135.6 255 41.6
Oeu058636.1 Olea europaea HOM05D007616 ORTHO05D008751 1.5e-29 134.0 242 44.2
CSS0021835 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 2.6e-29 133.3 247 40.1
Nn5g27765 Nelumbo nucifera HOM05D007616 ORTHO05D008751 2.6e-29 133.3 238 42.4
CSS0006253 Camellia sinensis var. sinensis HOM05D007616 ORTHO05D008751 3.3e-29 132.9 246 40.2
Manes.07G023000 Manihot esculenta HOM05D007616 ORTHO05D008751 5.7e-29 132.1 245 40.8
arahy.Tifrunner.gnm1.ann1.4HSG2Y Arachis hypogaea HOM05D007616 ORTHO05D008751 1.7e-28 130.6 245 41.2
CiPaw.06G173100 Carya illinoinensis HOM05D007616 ORTHO05D008751 3.7e-28 129.4 228 41.2
Glyma.12G167600 Glycine max HOM05D007616 ORTHO05D008751 3.7e-28 129.4 235 43.0
Lalb_Chr18g0061041 Lupinus albus HOM05D007616 ORTHO05D008751 3.7e-28 129.4 256 41.4
Duzib248G0210 Durio zibethinus HOM05D007616 ORTHO05D008751 2.4e-27 126.7 226 42.5
Phvul.006G218400 Phaseolus vulgaris HOM05D007616 ORTHO05D008751 4.1e-27 125.9 237 39.7
MD08G1240500 Malus domestica HOM05D007616 ORTHO05D008751 5.3e-27 125.6 257 38.1
Actinidia06472 Actinidia chinensis HOM05D007616 ORTHO05D008751 6.9e-27 125.2 224 41.5
Psat1g223480 Pisum sativum HOM05D007616 ORTHO05D008751 2.0e-26 123.6 255 40.8
Sabra01G0168700 Salix brachista HOM05D007616 ORTHO05D008751 3.4e-26 122.9 242 38.0
Sed0008181 Sechium edule HOM05D007616 ORTHO05D008751 3.4e-26 122.9 231 41.1
Migut.B00786 Erythranthe guttata HOM05D007616 ORTHO05D008751 7.7e-26 121.7 249 39.4
TPR.G2142 Trifolium pratense HOM05D007616 ORTHO05D008751 1.0e-25 121.3 250 40.4
MD15G1433700 Malus domestica HOM05D007616 ORTHO05D008751 1.3e-25 120.9 273 39.2
Rhsim05G0186200 Rhododendron simsii HOM05D007616 ORTHO05D008751 1.7e-25 120.6 249 37.3
VMungo0540G1916 Vigna mungo HOM05D007616 ORTHO05D008751 2.9e-25 119.8 235 39.1
ClCG11G013320 Citrullus lanatus HOM05D007616 ORTHO05D008751 1.1e-24 117.9 230 41.3
SGA_v2.0_scaffold272G46374 Striga asiatica HOM05D007616 ORTHO05D008751 1.4e-24 117.5 234 39.7
Lj6g0028114 Lotus japonicus HOM05D007616 ORTHO05D008751 2.5e-24 116.7 288 37.5
HPP92_005665 Vanilla planifolia HOM05D007616 ORTHO05D008751 1.6e-23 114.0 244 36.1
ECA236G1993 Erigeron canadensis HOM05D007616 ORTHO05D008751 4.7e-23 112.5 244 38.5
HanXRQChr06g0181301 Helianthus annuus HOM05D007616 ORTHO05D008751 2.3e-22 110.2 243 38.7
SalBow3G1194 Salvia bowleyana HOM05D007616 ORTHO05D008751 2.3e-22 110.2 239 37.7
Medtr2g005910 Medicago truncatula HOM05D007616 ORTHO05D008751 5.2e-22 109.0 196 43.4
PSO170G4229 Papaver somniferum HOM05D007616 ORTHO05D008751 5.2e-22 109.0 259 37.1
ECA240G3878 Erigeron canadensis HOM05D007616 ORTHO05D008751 6.7e-22 108.6 247 42.9
Lsat_1_v5_gn_9_120740 Lactuca sativa HOM05D007616 ORTHO05D008751 1.5e-21 107.5 245 37.1
Potri.019G021000 Populus trichocarpa HOM05D007616 ORTHO05D008751 3.3e-21 106.3 243 35.4
Aqoxy6G00124 Aquilegia oxysepala HOM05D007616 ORTHO05D008751 4.4e-21 105.9 239 37.2
MELO3C011824.2 Cucumis melo HOM05D007616 ORTHO05D008751 7.4e-21 105.1 216 40.3
Ca_00046_v3 Cicer arietinum L. HOM05D001654 ORTHO05D002773 1.7e-20 104.0 160 46.2
PSO782G2099 Papaver somniferum HOM05D007616 ORTHO05D008751 2.2e-20 103.6 261 36.8
Sc20g0001190 Simmondsia chinensis HOM05D007616 ORTHO05D008751 5.9e-18 95.5 165 43.0
AUR62037671 Chenopodium quinoa HOM05D002239 ORTHO05D002408 1.3e-17 94.4 263 32.3
AUR62034500 Chenopodium quinoa HOM05D007616 ORTHO05D008751 2.9e-17 93.2 264 33.0
THA.LOC104816807 Tarenaya hassleriana HOM05D007616 ORTHO05D008751 5.0e-17 92.4 270 33.7
TWI14G0953 Tripterygium wilfordii HOM05D007616 ORTHO05D008751 8.5e-17 91.7 241 35.3
CsaV3_5G029830 Cucumis sativus L. HOM05D001654 ORTHO05D002773 1.1e-16 91.3 193 43.5
Lsat_1_v5_gn_7_76421 Lactuca sativa HOM05D007616 ORTHO05D008751 1.1e-16 91.3 243 40.7
GSVIVG01023272001 Vitis vinifera HOM05D007616 ORTHO05D008751 1.9e-16 90.5 239 33.9
Cfa004508 Carpinus fangiana HOM05D007616 ORTHO05D008751 7.2e-16 88.6 220 39.5
Nn1g08457 Nelumbo nucifera HOM05D007616 ORTHO05D008751 2.1e-15 87.0 244 36.1
ATR0090G002 Amborella trichopoda HOM05D007616 ORTHO05D008751 1.0e-14 84.7 258 33.3
AL2G17970 Arabidopsis lyrata HOM05D012662 ORTHO05D008751 3.0e-14 83.2 276 32.6
Haze_10065 Corylus avellana HOM05D001654 ORTHO05D002773 6.7e-14 82.0 224 38.8
PGR142G0501 Punica granatum HOM05D007616 ORTHO05D008751 8.8e-14 81.6 183 34.4
Dinv07475 Davidia involucrata HOM05D001654 ORTHO05D002773 9.7e-13 78.2 109 46.8
TAR624G1080 Trochodendron aralioides HOM05D007616 ORTHO05D008751 4.8e-12 75.9 110 42.7
A09p18580 Brassica napus HOM05D012662 ORTHO05D008751 5.3e-11 72.4 192 39.6
Dinv40084 Davidia involucrata HOM05D002661 ORTHO05D002786 5.3e-11 72.4 224 30.8
Ah.06g187740 Amaranthus hybridus HOM05D007616 ORTHO05D008751 9.1e-11 71.6 116 44.8
Carub.0002s0656 Capsella rubella HOM05D012662 ORTHO05D008751 9.1e-11 71.6 261 36.0
Os11g0195800 Oryza sativa ssp. japonica HOM05D007616 ORTHO05D008751 2.0e-10 70.5 268 26.9
Hma1.2p1_0427F.1_g150730 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 2.7e-10 70.1 117 43.6
vmacro21919 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 1.3e-09 67.8 222 31.5
Ciclev10002504m.g Citrus clementina HOM05D002661 ORTHO05D002786 1.7e-09 67.4 223 27.8
MSTRG.2712 Avicennia marina HOM05D002661 ORTHO05D002786 3.8e-09 66.2 221 26.7
BcaC02g10705 Brassica carinata HOM05D007616 ORTHO05D008751 5.0e-09 65.9 216 32.9
Lj4A25T51 Lonicera japonica HOM05D002661 ORTHO05D002786 5.0e-09 65.9 241 28.6
vmacro04348 Vaccinium macrocarpon HOM05D002661 ORTHO05D002786 6.5e-09 65.5 227 27.3
Zm00001eb202050 Zea mays HOM05D007616 ORTHO05D008751 6.5e-09 65.5 268 26.9
Peaxi162Scf00400g00048 Petunia axillaris HOM05D002661 ORTHO05D002786 8.5e-09 65.1 230 26.5
Sopen02g028700 Solanum pennellii HOM05D002661 ORTHO05D002786 1.1e-08 64.7 221 26.2
Oeu005316.1 Olea europaea HOM05D002661 ORTHO05D002786 1.9e-08 63.9 216 27.8
DCAR_013866 Daucus carota HOM05D002661 ORTHO05D002786 2.5e-08 63.5 221 25.8
Nitab4.5_0003271g0010 Nicotiana tabacum HOM05D002661 ORTHO05D002786 2.5e-08 63.5 216 25.5
PSO675G6292 Papaver somniferum HOM05D002661 ORTHO05D002786 5.5e-08 62.4 256 27.0
Rhsim07G0246900 Rhododendron simsii HOM05D002661 ORTHO05D002786 5.5e-08 62.4 222 27.0
Peaxi162Scf00438g00717 Petunia axillaris HOM05D002661 ORTHO05D002786 7.2e-08 62.0 221 26.7
Cfa006970 Carpinus fangiana HOM05D002668 ORTHO05D003295 9.4e-08 61.6 218 29.8
Nitab4.5_0006119g0020 Nicotiana tabacum HOM05D002661 ORTHO05D002786 9.4e-08 61.6 222 27.5
TAR381G1099 Trochodendron aralioides HOM05D002661 ORTHO05D002786 1.6e-07 60.8 217 28.1
HanXRQChr14g0430361 Helianthus annuus HOM05D002661 ORTHO05D002786 2.1e-07 60.5 221 26.7
Hma1.2p1_1108F.1_g257940 Hydrangea macrophylla HOM05D007616 ORTHO05D008751 2.1e-07 60.5 244 28.3
PGSC0003DMG400022533 Solanum tuberosum HOM05D002661 ORTHO05D002786 3.6e-07 59.7 218 25.2
Aqoxy4G02812 Aquilegia oxysepala HOM05D002661 ORTHO05D002786 4.7e-07 59.3 217 28.6
Psat2g154760 Pisum sativum HOM05D002661 ORTHO05D002786 4.7e-07 59.3 222 28.4
QL11p039511 Quercus lobata HOM05D007616 ORTHO05D008751 4.7e-07 59.3 35 80.0
CiPaw.08G131700 Carya illinoinensis HOM05D002661 ORTHO05D002786 1.0e-06 58.2 235 27.2
Haze_22627 Corylus avellana HOM05D002661 ORTHO05D002786 1.0e-06 58.2 221 25.3
Dinv39512 Davidia involucrata HOM05D002661 ORTHO05D002786 1.0e-06 58.2 224 25.0
FAN20G0494 Fragaria x ananassa HOM05D002661 ORTHO05D002786 1.0e-06 58.2 223 28.7
QL02p011493 Quercus lobata HOM05D002661 ORTHO05D002786 1.0e-06 58.2 226 25.2
Sopen03g006340 Solanum pennellii HOM05D002661 ORTHO05D002786 1.0e-06 58.2 218 25.2
vmacro19869 Vaccinium macrocarpon HOM05D007616 ORTHO05D008751 1.0e-06 58.2 243 26.7
AUR62029460 Chenopodium quinoa HOM05D002661 ORTHO05D002786 1.4e-06 57.8 225 26.7
CANSAT01G1513 Cannabis sativa HOM05D002661 ORTHO05D002786 2.3e-06 57.0 229 26.2
CARHR053990 Cardamine hirsuta HOM05D012662 ORTHO05D008751 2.3e-06 57.0 253 34.8
MD15G1245800 Malus domestica HOM05D002661 ORTHO05D002786 2.3e-06 57.0 217 25.3
AUR62003372 Chenopodium quinoa HOM05D002661 ORTHO05D002786 3.0e-06 56.6 220 25.9
Nitab4.5_0000337g0140 Nicotiana tabacum HOM05D002661 ORTHO05D002786 3.0e-06 56.6 218 26.1
Solyc03g033550.3 Solanum lycopersicum HOM05D002661 ORTHO05D002786 4.0e-06 56.2 218 25.2
EL10Ac6g15477 Beta vulgaris HOM05D002661 ORTHO05D002786 5.2e-06 55.8 234 26.1
Peaxi162Scf00034g02717 Petunia axillaris HOM05D002661 ORTHO05D002786 5.2e-06 55.8 231 23.8
QL06p032701 Quercus lobata HOM05D002661 ORTHO05D002786 6.8e-06 55.5 217 26.7
QL12p007127 Quercus lobata HOM05D002661 ORTHO05D002786 6.8e-06 55.5 217 26.7
PGR031G0175 Punica granatum HOM05D002661 ORTHO05D002786 8.8e-06 55.1 258 24.0


User provided reference genes

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