Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G798.34 Capsicum annuum HOM05D009853 ORTHO05D009969 1.9e-55 219.2 130 100.0
PGSC0003DMG400033092 Solanum tuberosum HOM05D009853 ORTHO05D009969 4.9e-43 177.9 132 71.2
PGSC0003DMG400026582 Solanum tuberosum HOM05D009853 ORTHO05D009969 6.4e-43 177.6 132 72.0
PGSC0003DMG400016838 Solanum tuberosum HOM05D009853 ORTHO05D009969 3.2e-42 175.3 132 70.5
PGSC0003DMG400016835 Solanum tuberosum HOM05D009853 ORTHO05D009969 9.2e-42 173.7 132 70.5
PGSC0003DMG400024902 Solanum tuberosum HOM05D009853 ORTHO05D009969 9.2e-42 173.7 131 70.2
PGSC0003DMG400026881 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.1e-39 166.8 133 68.4
PGSC0003DMG400036234 Solanum tuberosum HOM05D009853 ORTHO05D009969 5.6e-39 164.5 132 70.5
Nitab4.5_0000948g0200 Nicotiana tabacum HOM05D009853 ORTHO05D009969 2.1e-38 162.5 118 73.7
Solyc01g103870.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 3.6e-38 161.8 128 68.0
Nitab4.5_0029272g0020 Nicotiana tabacum HOM05D009853 ORTHO05D009969 1.8e-37 159.5 118 72.9
Sopen01g046270 Solanum pennellii HOM05D000600 ORTHO05D000432 6.8e-37 157.5 125 65.6
Peaxi162Scf00011g00077 Petunia axillaris HOM05D009853 ORTHO05D009969 6.4e-35 151.0 133 69.9
Sopen01g046240 Solanum pennellii HOM05D000600 ORTHO05D000432 8.3e-35 150.6 119 66.4
Sopen06g027600 Solanum pennellii HOM05D009853 ORTHO05D009969 1.1e-34 150.2 140 68.6
Solyc06g071300.1 Solanum lycopersicum HOM05D009853 ORTHO05D009969 1.9e-34 149.4 136 66.2
PGSC0003DMG400035438 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.1e-29 133.7 104 69.2
PGSC0003DMG400039282 Solanum tuberosum HOM05D009853 ORTHO05D009969 1.1e-26 123.6 104 61.5
Nitab4.5_0002698g0090 Nicotiana tabacum HOM05D009853 ORTHO05D009969 9.2e-26 120.6 90 71.1
Nitab4.5_0000075g0290 Nicotiana tabacum HOM05D009853 ORTHO05D009969 9.9e-20 100.5 108 56.5
Peaxi162Scf01312g00064 Petunia axillaris HOM05D000628 ORTHO05D009969 2.8e-14 82.4 65 63.1
Oeu029235.1 Olea europaea HOM05D011412 ORTHO05D009969 1.1e-13 80.5 124 37.9
Oeu029234.1 Olea europaea HOM05D011412 ORTHO05D009969 1.2e-12 77.0 124 37.1
Oeu031750.4 Olea europaea HOM05D041624 ORTHO05D009969 4.4e-12 75.1 129 34.1
Nitab4.5_0003774g0010 Nicotiana tabacum HOM05D038292 ORTHO05D009969 7.6e-12 74.3 101 39.6
Actinidia01760 Actinidia chinensis HOM05D006819 ORTHO05D008763 4.9e-11 71.6 52 59.6
Dinv30482 Davidia involucrata HOM05D009853 ORTHO05D009969 6.4e-11 71.2 125 35.2
Actinidia20182 Actinidia chinensis HOM05D011412 ORTHO05D009969 2.4e-10 69.3 57 50.9
Dinv40186 Davidia involucrata HOM05D009853 ORTHO05D009969 3.2e-10 68.9 52 59.6
PGSC0003DMG400043439 Solanum tuberosum HOM05D009853 ORTHO05D009969 3.2e-10 68.9 71 56.3
Rhsim07G0189200 Rhododendron simsii HOM05D009853 ORTHO05D009969 4.2e-10 68.6 62 50.0
Oeu034504.1 Olea europaea HOM05D011412 ORTHO05D009969 7.1e-10 67.8 97 37.1
Dinv38023 Davidia involucrata HOM05D011412 ORTHO05D009969 9.3e-10 67.4 126 33.3
PGSC0003DMG400018623 Solanum tuberosum HOM05D013339 ORTHO05D009969 2.7e-09 65.9 131 32.8
Rhsim08G0027100 Rhododendron simsii HOM05D011412 ORTHO05D009969 4.6e-09 65.1 73 45.2
Solyc05g013370.1 Solanum lycopersicum HOM05D013339 ORTHO05D009969 6.0e-09 64.7 131 31.3
CSS0026794 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 7.8e-09 64.3 78 44.9
Oeu029249.1 Olea europaea HOM05D011412 ORTHO05D009969 7.8e-09 64.3 97 34.0
vmacro23014 Vaccinium macrocarpon HOM05D011412 ORTHO05D009969 1.0e-08 63.9 60 48.3
Oeu014492.1 Olea europaea HOM05D011412 ORTHO05D009969 1.7e-08 63.2 109 33.0
Actinidia23430 Actinidia chinensis HOM05D006887 ORTHO05D009969 3.0e-08 62.4 59 52.5
Oeu032521.1 Olea europaea HOM05D011412 ORTHO05D009969 3.9e-08 62.0 99 43.4
CSS0019303 Camellia sinensis var. sinensis HOM05D009853 ORTHO05D009969 5.1e-08 61.6 104 33.7
Oeu051266.1 Olea europaea HOM05D011412 ORTHO05D009969 5.1e-08 61.6 105 32.4
Rhsim08G0215000 Rhododendron simsii HOM05D011412 ORTHO05D009969 5.1e-08 61.6 65 47.7
Cfa015195 Carpinus fangiana HOM05D006887 ORTHO05D009969 6.6e-08 61.2 74 41.9
Oeu045757.1 Olea europaea HOM05D011412 ORTHO05D009969 8.7e-08 60.8 96 37.5
Sopen05g008160 Solanum pennellii HOM05D013339 ORTHO05D009969 8.7e-08 60.8 122 30.3
CAN.G1238.8 Capsicum annuum HOM05D006716 ORTHO05D008396 1.5e-07 60.1 135 26.7
PGSC0003DMG400007682 Solanum tuberosum HOM05D013339 ORTHO05D009969 1.5e-07 60.1 131 31.3
CSS0020150 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.9e-07 59.7 57 45.6
CSS0039249 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 1.9e-07 59.7 57 45.6
Potri.010G238900 Populus trichocarpa HOM05D015295 ORTHO05D009969 1.9e-07 59.7 73 42.5
CSS0003429 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.5e-07 59.3 78 42.3
Sabra10G0187100 Salix brachista HOM05D015295 ORTHO05D009969 3.3e-07 58.9 58 44.8
CARHR262050 Cardamine hirsuta HOM05D006887 ORTHO05D004325 5.6e-07 58.2 50 52.0
Oeu048608.1 Olea europaea HOM05D041624 ORTHO05D009969 7.3e-07 57.8 62 43.5
TAR365G0201 Trochodendron aralioides HOM05D000307 ORTHO05D000166 7.3e-07 57.8 114 34.2
Oeu048605.1 Olea europaea HOM05D041624 ORTHO05D009969 9.6e-07 57.4 127 29.1
Potri.008G020300 Populus trichocarpa HOM05D015295 ORTHO05D009969 9.6e-07 57.4 59 42.4
Sabra08G0013600 Salix brachista HOM05D015295 ORTHO05D009969 9.6e-07 57.4 56 46.4
BcaB06g27670 Brassica carinata HOM05D006887 ORTHO05D004325 1.3e-06 57.0 54 53.7
Cpa.g.sc365.3 Carica papaya HOM05D006887 ORTHO05D009969 1.3e-06 57.0 106 31.1
Haze_01459 Corylus avellana HOM05D006887 ORTHO05D009969 1.3e-06 57.0 73 39.7
Thhalv10028184m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 1.3e-06 57.0 50 50.0
Oeu032519.1 Olea europaea HOM05D011412 ORTHO05D009969 1.3e-06 57.0 48 45.8
BcaB06g27671 Brassica carinata HOM05D006887 ORTHO05D004325 1.6e-06 56.6 46 56.5
Actinidia09597 Actinidia chinensis HOM05D002537 ORTHO05D002751 2.1e-06 56.2 58 44.8
DCAR_007526 Daucus carota HOM05D009853 ORTHO05D009969 2.1e-06 56.2 64 43.8
Thhalv10028282m.g Eutrema salsugineum HOM05D006887 ORTHO05D004325 2.1e-06 56.2 50 50.0
BcaB06g27414 Brassica carinata HOM05D006887 ORTHO05D004325 2.8e-06 55.8 53 49.1
CSS0020566 Camellia sinensis var. sinensis HOM05D013339 ORTHO05D009969 2.8e-06 55.8 62 48.4
Manes.10G129900 Manihot esculenta HOM05D006887 ORTHO05D004325 2.8e-06 55.8 115 27.0
BcaB06g27394 Brassica carinata HOM05D006887 ORTHO05D004325 3.6e-06 55.5 46 54.3
BcaB06g27440 Brassica carinata HOM05D006887 ORTHO05D004325 3.6e-06 55.5 53 49.1
BcaB08g34810 Brassica carinata HOM05D006887 ORTHO05D004325 3.6e-06 55.5 56 46.4
THA.LOC104805962 Tarenaya hassleriana HOM05D006887 ORTHO05D004325 3.6e-06 55.5 75 36.0
FvH4_2g27520 Fragaria vesca HOM05D000307 ORTHO05D000166 4.8e-06 55.1 67 41.8
FAN15G0593 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-06 55.1 67 41.8
FAN20G0315 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-06 55.1 67 41.8
FAN24G2406 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-06 55.1 67 41.8
FAN27G3405 Fragaria x ananassa HOM05D000307 ORTHO05D000166 4.8e-06 55.1 67 41.8
TAR625G0923 Trochodendron aralioides HOM05D000307 ORTHO05D000166 4.8e-06 55.1 107 34.6
AL7G49930 Arabidopsis lyrata HOM05D006887 ORTHO05D004325 6.2e-06 54.7 50 50.0
A04p12980 Brassica napus HOM05D006887 ORTHO05D004325 6.2e-06 54.7 51 49.0
C04p46750 Brassica napus HOM05D006887 ORTHO05D004325 6.2e-06 54.7 46 54.3
BolC4t26262H Brassica oleracea HOM05D006887 ORTHO05D004325 6.2e-06 54.7 46 54.3
Prupe.3G148900 Prunus persica HOM05D000307 ORTHO05D000166 6.2e-06 54.7 68 42.6
BolC4t26260H Brassica oleracea HOM05D006887 ORTHO05D004325 8.1e-06 54.3 46 54.3
CSS0012311 Camellia sinensis var. sinensis HOM05D000307 ORTHO05D000166 8.1e-06 54.3 95 30.5


User provided reference genes

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