Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G793.43 Capsicum annuum HOM05D004054 ORTHO05D004945 7.2e-81 303.9 159 100.0
Nitab4.5_0008717g0030 Nicotiana tabacum HOM05D004054 ORTHO05D004945 9.2e-52 207.2 164 71.3
Nitab4.5_0009649g0020 Nicotiana tabacum HOM05D004054 ORTHO05D004945 9.2e-52 207.2 164 71.3
Sopen05g002990 Solanum pennellii HOM05D004054 ORTHO05D004945 4.9e-45 184.9 164 67.1
Peaxi162Scf00209g00326 Petunia axillaris HOM05D004054 ORTHO05D004945 1.4e-44 183.3 174 62.1
Migut.L01344 Erythranthe guttata HOM05D004054 ORTHO05D004945 4.7e-24 115.2 174 44.3
MD13G1079000 Malus domestica HOM05D004054 ORTHO05D004945 4.4e-22 108.6 170 42.9
FvH4_4g31960 Fragaria vesca HOM05D004054 ORTHO05D004945 9.9e-22 107.5 173 45.1
FAN12G3951 Fragaria x ananassa HOM05D004054 ORTHO05D004945 9.9e-22 107.5 173 45.1
RcHm_v2.0_Chr4g0440641 Rosa chinensis HOM05D004054 ORTHO05D004945 9.9e-22 107.5 174 44.8
FAN07G1439 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.3e-21 107.1 173 45.1
FAN17G1509 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.3e-21 107.1 173 45.1
FAN22G1878 Fragaria x ananassa HOM05D004054 ORTHO05D004945 1.3e-21 107.1 173 45.1
Haze_12066 Corylus avellana HOM05D004054 ORTHO05D004945 1.7e-21 106.7 175 41.7
RcHm_v2.0_Chr1g0353921 Rosa chinensis HOM05D004054 ORTHO05D004945 2.9e-21 105.9 173 45.1
Thecc.02G355300 Theobroma cacao HOM05D004054 ORTHO05D004945 2.9e-21 105.9 171 42.7
RcHm_v2.0_Chr1g0331881 Rosa chinensis HOM05D004054 ORTHO05D004945 3.8e-21 105.5 176 44.3
Sc11g0001680 Simmondsia chinensis HOM05D004054 ORTHO05D004945 6.4e-21 104.8 175 40.0
Duzib268G1532 Durio zibethinus HOM05D004054 ORTHO05D004945 8.4e-21 104.4 175 42.9
Sabra10G0030700 Salix brachista HOM05D004054 ORTHO05D004945 8.4e-21 104.4 172 44.2
SalBow2G0733 Salvia bowleyana HOM05D004054 ORTHO05D004945 8.4e-21 104.4 175 42.9
SalBow2G2854 Salvia bowleyana HOM05D004054 ORTHO05D004945 8.4e-21 104.4 175 42.9
CSS0048330 Camellia sinensis var. sinensis HOM05D004054 ORTHO05D004945 1.1e-20 104.0 177 39.5
CiPaw.06G080600 Carya illinoinensis HOM05D004054 ORTHO05D004945 1.4e-20 103.6 175 42.9
COL.COLO4_07923 Corchorus olitorius HOM05D004054 ORTHO05D004945 1.9e-20 103.2 171 42.1
MD16G1078700 Malus domestica HOM05D004054 ORTHO05D004945 1.9e-20 103.2 170 40.0
Rhsim01G0215700 Rhododendron simsii HOM05D004054 ORTHO05D004945 1.9e-20 103.2 177 37.9
SGA_v2.0_scaffold302G47866 Striga asiatica HOM05D004054 ORTHO05D004945 1.9e-20 103.2 179 41.9
MSTRG.671 Avicennia marina HOM05D004054 ORTHO05D004945 3.2e-20 102.4 171 42.1
Potri.010G033900 Populus trichocarpa HOM05D004054 ORTHO05D004945 3.2e-20 102.4 172 43.6
vmacro07429 Vaccinium macrocarpon HOM05D004054 ORTHO05D004945 3.2e-20 102.4 178 39.9
Duzib248G1634 Durio zibethinus HOM05D004054 ORTHO05D004945 4.2e-20 102.1 175 41.7
QL03p065666 Quercus lobata HOM05D004054 ORTHO05D004945 5.4e-20 101.7 176 39.8
Actinidia05393 Actinidia chinensis HOM05D004054 ORTHO05D004945 7.1e-20 101.3 169 40.2
Cfa009037 Carpinus fangiana HOM05D004054 ORTHO05D004945 7.1e-20 101.3 176 41.5
Prupe.1G267800 Prunus persica HOM05D004054 ORTHO05D004945 2.1e-19 99.8 175 41.7
TAR362G0462 Trochodendron aralioides HOM05D004054 ORTHO05D004945 3.5e-19 99.0 178 40.4
Cpa.g.sc5.277 Carica papaya HOM05D004054 ORTHO05D004945 1.0e-18 97.4 175 39.4
PGR102G2139 Punica granatum HOM05D004054 ORTHO05D004945 1.0e-18 97.4 185 40.0
Eucgr.B03410 Eucalyptus grandis HOM05D004054 ORTHO05D004945 1.3e-18 97.1 177 40.7
Gohir.D12G170300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.7e-18 96.7 184 38.6
Gorai.008G182900 Gossypium raimondii HOM05D004054 ORTHO05D004945 3.0e-18 95.9 184 38.0
Gorai.013G077900 Gossypium raimondii HOM05D004054 ORTHO05D004945 3.0e-18 95.9 175 41.1
Sed0026408 Sechium edule HOM05D004054 ORTHO05D004945 3.0e-18 95.9 173 42.2
GSVIVG01036940001 Vitis vinifera HOM05D004054 ORTHO05D004945 3.0e-18 95.9 164 42.1
Gohir.A13G052300 Gossypium hirsutum HOM05D004054 ORTHO05D004945 6.6e-18 94.7 175 41.7
Hma1.2p1_1545F.1_g289900 Hydrangea macrophylla HOM05D004054 ORTHO05D004945 1.1e-17 94.0 178 38.2
DCAR_027382 Daucus carota HOM05D004054 ORTHO05D004945 1.5e-17 93.6 170 41.2
Gohir.D13G068400 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.5e-17 93.6 175 42.9
Solyc05g007030.4 Solanum lycopersicum HOM05D004054 ORTHO05D004945 1.9e-17 93.2 59 81.4
GSVIVG01020074001 Vitis vinifera HOM05D004054 ORTHO05D004945 2.5e-17 92.8 177 41.8
Manes.05G096500 Manihot esculenta HOM05D004054 ORTHO05D004945 3.3e-17 92.4 175 39.4
AUR62026254 Chenopodium quinoa HOM05D004054 ORTHO05D004945 4.3e-17 92.0 167 38.9
Atru.chr11.1851 Acer truncatum HOM05D004054 ORTHO05D004945 7.3e-17 91.3 173 39.9
Oeu028539.1 Olea europaea HOM05D004054 ORTHO05D004945 7.3e-17 91.3 191 38.7
Ciclev10030693m.g Citrus clementina HOM05D004054 ORTHO05D004945 1.3e-16 90.5 174 38.5
Lsat_1_v5_gn_8_54080 Lactuca sativa HOM05D004054 ORTHO05D004945 1.6e-16 90.1 175 37.7
Sp3g16020 Schrenkiella parvula HOM05D004054 ORTHO05D004945 2.1e-16 89.7 165 37.0
CARHR093230 Cardamine hirsuta HOM05D004054 ORTHO05D004945 2.8e-16 89.4 165 37.6
Nn1g02896 Nelumbo nucifera HOM05D004054 ORTHO05D004945 2.8e-16 89.4 176 36.9
Psat4g132120 Pisum sativum HOM05D004054 ORTHO05D004945 4.8e-16 88.6 172 39.5
MELO3C012068.2 Cucumis melo HOM05D004054 ORTHO05D004945 6.2e-16 88.2 165 43.0
Thhalv10020058m.g Eutrema salsugineum HOM05D004054 ORTHO05D004945 6.2e-16 88.2 165 35.8
Lj4g0012636 Lotus japonicus HOM05D004054 ORTHO05D004945 6.2e-16 88.2 172 39.5
AUR62026447 Chenopodium quinoa HOM05D004054 ORTHO05D004945 8.1e-16 87.8 165 37.6
Medtr8g469270 Medicago truncatula HOM05D004054 ORTHO05D004945 8.1e-16 87.8 171 38.6
Oeu011693.1 Olea europaea HOM05D004054 ORTHO05D004945 1.1e-15 87.4 182 39.0
AL3G31070 Arabidopsis lyrata HOM05D004054 ORTHO05D004945 1.4e-15 87.0 165 36.4
Carub.0003s1763 Capsella rubella HOM05D004054 ORTHO05D004945 1.8e-15 86.7 162 35.8
CsaV3_5G032370 Cucumis sativus L. HOM05D004054 ORTHO05D004945 1.8e-15 86.7 164 42.7
Lalb_Chr16g0392581 Lupinus albus HOM05D004054 ORTHO05D004945 1.8e-15 86.7 174 40.2
MBI17_g39912_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 1.8e-15 86.7 184 34.8
Aa31LG8G4770 Aethionema arabicum HOM05D004054 ORTHO05D004945 2.4e-15 86.3 167 34.7
Aqoxy5G00175 Aquilegia oxysepala HOM05D004054 ORTHO05D004945 3.1e-15 85.9 165 39.4
AT3G17900 Arabidopsis thaliana HOM05D004054 ORTHO05D004945 3.1e-15 85.9 165 36.4
Cc11_g13490 Coffea canephora HOM05D004054 ORTHO05D004945 4.0e-15 85.5 185 35.7
Glyma.08G296300 Glycine max HOM05D004054 ORTHO05D004945 4.0e-15 85.5 173 37.6
TWI36G0714 Tripterygium wilfordii HOM05D004054 ORTHO05D004945 4.0e-15 85.5 167 37.7
VMungo0251G1664 Vigna mungo HOM05D004054 ORTHO05D004945 4.0e-15 85.5 171 38.0
Dinv24955 Davidia involucrata HOM05D004054 ORTHO05D004945 5.3e-15 85.1 176 35.2
PSO832G3945 Papaver somniferum HOM05D004054 ORTHO05D004945 1.5e-14 83.6 181 37.0
Ca_22853_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 2.0e-14 83.2 172 37.2
ECA247G4086 Erigeron canadensis HOM05D004054 ORTHO05D004945 2.6e-14 82.8 169 37.9
Glyma.18G126000 Glycine max HOM05D004054 ORTHO05D004945 3.4e-14 82.4 172 37.8
PSO764G0096 Papaver somniferum HOM05D004054 ORTHO05D004945 4.4e-14 82.0 183 37.2
Hund05913 Selenicereus undatus HOM05D004054 ORTHO05D004945 4.4e-14 82.0 165 34.5
Hund25271 Selenicereus undatus HOM05D004054 ORTHO05D004945 5.8e-14 81.6 171 38.0
EL10Ac6g13147 Beta vulgaris HOM05D004054 ORTHO05D004945 7.6e-14 81.3 172 37.2
ClCG05G024580 Citrullus lanatus HOM05D004054 ORTHO05D004945 7.6e-14 81.3 160 38.1
Phvul.003G069800 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 7.6e-14 81.3 171 36.3
TPR.G33257 Trifolium pratense HOM05D004054 ORTHO05D004945 7.6e-14 81.3 171 38.0
Ah.03g132020 Amaranthus hybridus HOM05D004054 ORTHO05D004945 1.3e-13 80.5 165 37.0
HanXRQChr12g0369801 Helianthus annuus HOM05D004054 ORTHO05D004945 1.3e-13 80.5 165 37.6
THA.LOC104820344 Tarenaya hassleriana HOM05D004054 ORTHO05D004945 1.7e-13 80.1 163 35.6
MBI11_g00106_MAGBIO Magnolia biondii HOM05D004054 ORTHO05D004945 2.2e-13 79.7 184 32.1
arahy.Tifrunner.gnm1.ann1.K6PP8H Arachis hypogaea HOM05D004054 ORTHO05D004945 3.8e-13 79.0 172 37.8
BcaB04g20809 Brassica carinata HOM05D004054 ORTHO05D004945 1.1e-12 77.4 167 35.3
Nn3g19739 Nelumbo nucifera HOM05D004054 ORTHO05D004945 3.2e-12 75.9 169 33.7
Lalb_Chr17g0340361 Lupinus albus HOM05D004054 ORTHO05D004945 5.4e-12 75.1 157 39.5
A03p40440 Brassica napus HOM05D004054 ORTHO05D004945 9.3e-12 74.3 153 34.6
C03p49280 Brassica napus HOM05D004054 ORTHO05D004945 9.3e-12 74.3 153 34.6
BolC3t17216H Brassica oleracea HOM05D004054 ORTHO05D004945 9.3e-12 74.3 153 34.6
BraA03t13202Z Brassica rapa HOM05D004054 ORTHO05D004945 9.3e-12 74.3 153 34.6
BraA01t03713Z Brassica rapa HOM05D004054 ORTHO05D004945 2.1e-11 73.2 152 36.2
C01p46250 Brassica napus HOM05D004054 ORTHO05D004945 1.0e-10 70.9 159 33.3
BolC1t04586H Brassica oleracea HOM05D004054 ORTHO05D004945 1.0e-10 70.9 159 33.3
Glyma.02G021900 Glycine max HOM05D004054 ORTHO05D004945 1.7e-10 70.1 163 35.6
BcaC09g48754 Brassica carinata HOM05D004054 ORTHO05D004945 3.0e-10 69.3 159 34.0
unitig_22.g6528 Utricularia gibba HOM05D004054 ORTHO05D004945 3.9e-10 68.9 145 35.9
A01p36490 Brassica napus HOM05D004054 ORTHO05D004945 5.1e-10 68.6 154 33.1
Phvul.002G066700 Phaseolus vulgaris HOM05D004054 ORTHO05D004945 2.5e-09 66.2 162 34.0
VMungo1215G1372 Vigna mungo HOM05D004054 ORTHO05D004945 5.6e-09 65.1 162 33.3
Lj2g0020807 Lotus japonicus HOM05D004054 ORTHO05D004945 7.3e-09 64.7 167 32.3
Psat2g124400 Pisum sativum HOM05D004054 ORTHO05D004945 2.8e-08 62.8 167 32.9
Zm00001eb409770 Zea mays HOM05D004054 ORTHO05D004945 8.1e-08 61.2 167 32.9
Medtr5g038440 Medicago truncatula HOM05D004054 ORTHO05D004945 1.1e-07 60.8 170 30.6
SEGI_39580 Sequoiadendron giganteum HOM05D004054 ORTHO05D004945 3.1e-07 59.3 185 30.8
Lalb_Chr09g0335271 Lupinus albus HOM05D004054 ORTHO05D004945 4.0e-07 58.9 169 32.0
TPR.G13762 Trifolium pratense HOM05D004054 ORTHO05D004945 9.0e-07 57.8 168 31.5
Gohir.A12G166900 Gossypium hirsutum HOM05D004054 ORTHO05D004945 1.2e-06 57.4 88 40.9
arahy.Tifrunner.gnm1.ann1.B2D650 Arachis hypogaea HOM05D004054 ORTHO05D004945 2.0e-06 56.6 174 30.5
BcaB04g18970 Brassica carinata HOM05D004054 ORTHO05D004945 2.6e-06 56.2 146 34.9
CDE09G0195 Ceratophyllum demersum HOM05D004054 ORTHO05D004945 5.8e-06 55.1 188 30.9
Ca_04741_v3 Cicer arietinum L. HOM05D004054 ORTHO05D004945 7.6e-06 54.7 165 29.7
arahy.Tifrunner.gnm1.ann1.S53SYG Arachis hypogaea HOM05D004054 ORTHO05D004945 9.9e-06 54.3 174 29.9


User provided reference genes

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