Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G793.35 Capsicum annuum HOM05D006457 ORTHO05D008275 1.2e-133 479.9 252 100.0
Solyc09g089880.3 Solanum lycopersicum HOM05D006457 ORTHO05D008275 3.5e-130 468.4 252 96.4
PGSC0003DMG400017180 Solanum tuberosum HOM05D006457 ORTHO05D008275 1.0e-129 466.8 252 96.0
Sopen09g032820 Solanum pennellii HOM05D006457 ORTHO05D008275 1.1e-128 463.4 252 96.4
Nitab4.5_0000342g0030 Nicotiana tabacum HOM05D006457 ORTHO05D008275 6.8e-126 454.1 252 93.3
Peaxi162Scf00024g02411 Petunia axillaris HOM05D006457 ORTHO05D008275 8.9e-126 453.8 252 93.3
Nitab4.5_0003897g0020 Nicotiana tabacum HOM05D006457 ORTHO05D008275 1.5e-125 453.0 252 93.3
Nn1g02723 Nelumbo nucifera HOM05D006457 ORTHO05D008275 2.6e-117 425.6 252 86.1
Nn3g19624 Nelumbo nucifera HOM05D006457 ORTHO05D008275 4.4e-117 424.9 252 86.1
GSVIVG01027767001 Vitis vinifera HOM05D006457 ORTHO05D008275 2.2e-116 422.5 252 86.5
MSTRG.9902 Avicennia marina HOM05D006457 ORTHO05D008275 2.9e-116 422.2 252 86.5
Hund03034 Selenicereus undatus HOM05D006457 ORTHO05D008275 6.4e-116 421.0 252 85.3
Cc03_g05380 Coffea canephora HOM05D006457 ORTHO05D008275 8.4e-116 420.6 252 83.7
Ah.04g156060 Amaranthus hybridus HOM05D006457 ORTHO05D008275 1.9e-115 419.5 254 85.0
PGR031G3937 Punica granatum HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 84.5
TPR.G26440 Trifolium pratense HOM05D006457 ORTHO05D008275 1.9e-115 419.5 252 84.9
Sc19g0003600 Simmondsia chinensis HOM05D006457 ORTHO05D008275 2.4e-115 419.1 252 84.5
CsaV3_3G012200 Cucumis sativus L. HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 84.5
TAR636G2559 Trochodendron aralioides HOM05D006457 ORTHO05D008275 4.2e-115 418.3 252 84.5
MELO3C006434.2 Cucumis melo HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 84.1
Hma1.2p1_0267F.1_g107360 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 83.7
Medtr1g074170 Medicago truncatula HOM05D006457 ORTHO05D008275 1.6e-114 416.4 252 84.1
QL06p016992 Quercus lobata HOM05D006457 ORTHO05D008275 2.1e-114 416.0 251 84.1
RcHm_v2.0_Chr4g0392411 Rosa chinensis HOM05D006457 ORTHO05D008275 2.1e-114 416.0 252 85.3
Cfa008326 Carpinus fangiana HOM05D006457 ORTHO05D008275 3.5e-114 415.2 252 85.3
ClCG05G004380 Citrullus lanatus HOM05D006457 ORTHO05D008275 3.5e-114 415.2 250 82.8
FvH4_4g03430 Fragaria vesca HOM05D006457 ORTHO05D008275 4.6e-114 414.8 252 84.1
EL10Ac3g05029 Beta vulgaris HOM05D006457 ORTHO05D008275 6.0e-114 414.5 254 83.9
Duzib212G0218 Durio zibethinus HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 82.5
Sed0004292 Sechium edule HOM05D006457 ORTHO05D008275 6.0e-114 414.5 252 82.5
Haze_11345 Corylus avellana HOM05D006457 ORTHO05D008275 7.8e-114 414.1 252 84.9
DCAR_027307 Daucus carota HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 84.5
Lj6A662T59 Lonicera japonica HOM05D006457 ORTHO05D008275 1.0e-113 413.7 253 83.8
Lj5g0021789 Lotus japonicus HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.7
MD13G1212500 Malus domestica HOM05D006457 ORTHO05D008275 1.0e-113 413.7 252 83.7
Psat6g128760 Pisum sativum HOM05D006457 ORTHO05D008275 1.7e-113 412.9 252 84.1
Glyma.10G187300 Glycine max HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 83.3
Potri.008G165800 Populus trichocarpa HOM05D006457 ORTHO05D008275 2.3e-113 412.5 252 83.3
Gorai.006G072000 Gossypium raimondii HOM05D006457 ORTHO05D008275 3.0e-113 412.1 252 82.5
Gohir.A09G058300 Gossypium hirsutum HOM05D006457 ORTHO05D008275 3.9e-113 411.8 252 82.5
AUR62002111 Chenopodium quinoa HOM05D006457 ORTHO05D008275 5.1e-113 411.4 253 84.6
HanXRQChr05g0134481 Helianthus annuus HOM05D006457 ORTHO05D008275 6.6e-113 411.0 252 82.1
FAN22G0441 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.7
Thecc.04G253200 Theobroma cacao HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.3
vmacro15431 Vaccinium macrocarpon HOM05D006457 ORTHO05D008275 1.1e-112 410.2 252 83.7
CSS0034990 Camellia sinensis var. sinensis HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 80.6
ECA233G3697 Erigeron canadensis HOM05D006457 ORTHO05D008275 1.9e-112 409.5 250 82.0
VMungo0720G2635 Vigna mungo HOM05D006457 ORTHO05D008275 1.9e-112 409.5 252 82.9
Migut.N00260 Erythranthe guttata HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 84.5
Prupe.1G037500 Prunus persica HOM05D006457 ORTHO05D008275 2.5e-112 409.1 252 82.9
Eucgr.H00173 Eucalyptus grandis HOM05D006457 ORTHO05D008275 3.3e-112 408.7 252 82.5
Ciclev10005707m.g Citrus clementina HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 82.5
Glyma.20G203200 Glycine max HOM05D006457 ORTHO05D008275 4.3e-112 408.3 252 82.1
Manes.03G165500 Manihot esculenta HOM05D006457 ORTHO05D008275 9.6e-112 407.1 252 81.7
Atru.chr4.2091 Acer truncatum HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 82.9
Lsat_1_v5_gn_5_72441 Lactuca sativa HOM05D006457 ORTHO05D008275 1.2e-111 406.8 248 83.5
MBI18_g15334_MAGBIO Magnolia biondii HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 81.7
Rhsim02G0036100 Rhododendron simsii HOM05D006457 ORTHO05D008275 1.2e-111 406.8 252 82.1
Lalb_Chr02g0150531 Lupinus albus HOM05D006457 ORTHO05D008275 1.6e-111 406.4 252 81.7
Sp2g08310 Schrenkiella parvula HOM05D006457 ORTHO05D008275 2.8e-111 405.6 252 82.1
CARHR180150 Cardamine hirsuta HOM05D006457 ORTHO05D008275 4.7e-111 404.8 252 80.6
Thhalv10003253m.g Eutrema salsugineum HOM05D006457 ORTHO05D008275 6.2e-111 404.4 252 81.3
Phvul.007G128300 Phaseolus vulgaris HOM05D006457 ORTHO05D008275 8.1e-111 404.1 252 81.7
AL8G16870 Arabidopsis lyrata HOM05D006457 ORTHO05D008275 1.1e-110 403.7 252 81.0
Ca_09820_v3 Cicer arietinum L. HOM05D006457 ORTHO05D008275 1.4e-110 403.3 281 76.2
Actinidia39894 Actinidia chinensis HOM05D006457 ORTHO05D008275 1.8e-110 402.9 252 80.6
Aa31LG5G3680 Aethionema arabicum HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 80.2
AT5G43430 Arabidopsis thaliana HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 81.0
THA.LOC104801088 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 3.1e-110 402.1 252 80.2
BcaC04g21915 Brassica carinata HOM05D006457 ORTHO05D008275 4.0e-110 401.7 252 81.7
Carub.0008s0516 Capsella rubella HOM05D006457 ORTHO05D008275 6.9e-110 401.0 252 79.8
PSO832G2062 Papaver somniferum HOM05D006457 ORTHO05D008275 6.9e-110 401.0 256 80.5
PSO210G6447 Papaver somniferum HOM05D006457 ORTHO05D008275 1.2e-109 400.2 256 80.5
BcaB07g31008 Brassica carinata HOM05D006457 ORTHO05D008275 2.0e-109 399.4 254 81.5
HPP92_025980 Vanilla planifolia HOM05D006457 ORTHO05D008275 3.4e-109 398.7 253 79.1
arahy.Tifrunner.gnm1.ann1.AG4MDC Arachis hypogaea HOM05D006457 ORTHO05D008275 4.4e-109 398.3 252 81.3
arahy.Tifrunner.gnm1.ann1.YH23E2 Arachis hypogaea HOM05D006457 ORTHO05D008275 5.8e-109 397.9 250 81.2
BolC9t55493H Brassica oleracea HOM05D006457 ORTHO05D008275 5.8e-109 397.9 249 82.3
Aqoxy5G00253 Aquilegia oxysepala HOM05D006457 ORTHO05D008275 9.9e-109 397.1 260 78.8
FAN17G1464 Fragaria x ananassa HOM05D006457 ORTHO05D008275 1.3e-108 396.7 252 81.7
A09p20470 Brassica napus HOM05D006457 ORTHO05D008275 1.7e-108 396.4 249 81.9
SGA_v2.0_scaffold67G22771 Striga asiatica HOM05D006457 ORTHO05D008275 1.7e-108 396.4 283 74.6
Sabra08G0126300 Salix brachista HOM05D006457 ORTHO05D008275 2.9e-108 395.6 283 74.2
C09p25850 Brassica napus HOM05D006457 ORTHO05D008275 8.4e-108 394.0 249 81.9
ATR0680G075 Amborella trichopoda HOM05D006457 ORTHO05D008275 4.2e-107 391.7 252 79.0
BraA09t37652Z Brassica rapa HOM05D006457 ORTHO05D008275 4.6e-106 388.3 259 78.8
Dinv27040 Davidia involucrata HOM05D006457 ORTHO05D008275 4.6e-106 388.3 239 82.8
SEGI_23974 Sequoiadendron giganteum HOM05D006457 ORTHO05D008275 1.7e-105 386.3 252 79.4
Zm00001eb419600 Zea mays HOM05D006457 ORTHO05D008275 9.9e-101 370.5 256 73.4
Os04g0182800 Oryza sativa ssp. japonica HOM05D006457 ORTHO05D008275 5.4e-99 364.8 256 73.4
FAN12G4283 Fragaria x ananassa HOM05D006457 ORTHO05D008275 4.6e-98 361.7 274 72.6
Pp3c16_12620 Physcomitrium patens HOM05D006457 ORTHO05D008275 5.1e-97 358.2 252 72.2
AUR62028231 Chenopodium quinoa HOM05D006457 ORTHO05D008275 9.6e-96 354.0 221 81.9
SHI00666 Sapria himalayana HOM05D006457 ORTHO05D008275 3.1e-94 349.0 267 67.0
AagrBONN_evm.TU.Sc2ySwM_228.708 Anthoceros agrestis HOM05D006457 ORTHO05D008275 5.3e-94 348.2 252 70.2
SMO145G0254 Selaginella moellendorffii HOM05D006457 ORTHO05D008275 9.0e-94 347.4 254 70.1
Mapoly0061s0138 Marchantia polymorpha HOM05D006457 ORTHO05D008275 9.9e-93 344.0 252 70.6
TWI73G0230 Tripterygium wilfordii HOM05D006457 ORTHO05D008275 9.3e-91 337.4 252 72.2
Cpa.g.sc44.77 Carica papaya HOM05D006457 ORTHO05D008275 1.0e-89 334.0 255 70.6
SalBow3G1824 Salvia bowleyana HOM05D006457 ORTHO05D008275 6.5e-84 314.7 274 66.4
Gohir.D09G057800 Gossypium hirsutum HOM05D006457 ORTHO05D008275 1.3e-81 307.0 190 80.5
unitig_748.g7323 Utricularia gibba HOM05D006457 ORTHO05D008275 5.7e-80 301.6 191 81.2
Haze_27028 Corylus avellana HOM05D006457 ORTHO05D008275 4.8e-79 298.5 252 62.3
Dinv29877 Davidia involucrata HOM05D006457 ORTHO05D008275 1.8e-78 296.6 177 84.7
THA.LOC104826077 Tarenaya hassleriana HOM05D006457 ORTHO05D008275 4.1e-78 295.4 229 68.1
Hma1.2p1_0267F.1_g107350 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.9e-78 294.7 176 83.5
CiPaw.02G113800 Carya illinoinensis HOM05D006457 ORTHO05D008275 1.9e-75 286.6 177 82.5
PRCOL_00002410 Prasinoderma coloniale HOM05D006457 ORTHO05D008275 6.1e-74 281.6 255 58.0
Cre12.g554953 Chlamydomonas reinhardtii HOM05D006457 ORTHO05D008275 3.9e-73 278.9 280 55.0
Haze_27526 Corylus avellana HOM05D006457 ORTHO05D008275 2.0e-64 250.0 252 56.3
Haze_26122 Corylus avellana HOM05D006457 ORTHO05D008275 2.4e-62 243.0 254 52.8
CANSAT78G2507 Cannabis sativa HOM05D006457 ORTHO05D008275 1.7e-60 236.9 145 82.1
CDE05G1545 Ceratophyllum demersum HOM05D006457 ORTHO05D008275 8.5e-60 234.6 146 81.5
Cfa021602 Carpinus fangiana HOM05D006457 ORTHO05D008275 2.2e-55 219.9 254 47.6
Zm00001eb087650 Zea mays HOM05D006457 ORTHO05D008275 1.0e-49 201.1 123 80.5
MD16G1216100 Malus domestica HOM05D006457 ORTHO05D008275 3.0e-33 146.4 91 76.9
Oeu011992.1 Olea europaea HOM05D006457 ORTHO05D008275 4.0e-33 146.0 86 87.2
HanXRQChr03g0066771 Helianthus annuus HOM05D006457 ORTHO05D008275 8.9e-33 144.8 96 72.9
Oeu063893.1 Olea europaea HOM05D006457 ORTHO05D000397 2.8e-26 123.2 83 75.9
MBI15_g29425_MAGBIO Magnolia biondii HOM05D016614 ORTHO05D012466 4.0e-17 92.8 63 66.7
Hma1.2p1_0267F.1_g107370 Hydrangea macrophylla HOM05D006457 ORTHO05D008275 6.0e-13 79.0 48 81.2
VMungo0720G2370 Vigna mungo HOM05D006457 ORTHO05D008275 2.6e-08 63.5 49 61.2
RcHm_v2.0_Chr5g0058341 Rosa chinensis HOM05D006457 ORTHO05D008275 1.7e-07 60.8 34 79.4


User provided reference genes

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