Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G792.49 Capsicum annuum HOM05D000570 ORTHO05D115452 1.9e-247 859.0 533 100.0
Nitab4.5_0000016g0310 Nicotiana tabacum HOM05D000570 ORTHO05D005344 1.3e-25 122.1 121 57.9
Nitab4.5_0003572g0030 Nicotiana tabacum HOM05D000570 ORTHO05D005344 6.5e-25 119.8 121 57.0
CAN.G654.5 Capsicum annuum HOM05D000570 ORTHO05D005344 1.4e-24 118.6 123 57.7
Solyc03g059020.3 Solanum lycopersicum HOM05D000570 ORTHO05D005344 7.1e-24 116.3 121 56.2
PGSC0003DMG400002059 Solanum tuberosum HOM05D000570 ORTHO05D005344 9.3e-24 115.9 121 55.4
Sopen03g013070 Solanum pennellii HOM05D000570 ORTHO05D005344 3.5e-23 114.0 121 55.4
Peaxi162Scf00258g00013 Petunia axillaris HOM05D000570 ORTHO05D005344 4.3e-21 107.1 123 54.5
Peaxi162Scf00620g00917 Petunia axillaris HOM05D000570 ORTHO05D005344 2.8e-20 104.4 123 54.5
Cc00_g14620 Coffea canephora HOM05D000570 ORTHO05D005344 7.9e-15 86.3 120 44.2
Dinv24091 Davidia involucrata HOM05D000570 ORTHO05D005344 3.0e-14 84.3 120 43.3
vmacro07934 Vaccinium macrocarpon HOM05D000570 ORTHO05D005344 7.4e-13 79.7 120 42.5
Atru.chr8.1053 Acer truncatum HOM05D000570 ORTHO05D005344 9.7e-13 79.3 121 44.6
MD14G1060500 Malus domestica HOM05D000570 ORTHO05D005344 9.7e-13 79.3 147 38.8
MSTRG.6467 Avicennia marina HOM05D000570 ORTHO05D005344 1.6e-12 78.6 120 40.8
Haze_19964 Corylus avellana HOM05D000570 ORTHO05D005344 2.2e-12 78.2 121 42.1
Rhsim03G0009000 Rhododendron simsii HOM05D000570 ORTHO05D005344 8.2e-12 76.3 122 41.0
ClCG10G017390 Citrullus lanatus HOM05D000570 ORTHO05D005344 1.1e-11 75.9 121 40.5
QL07p023168 Quercus lobata HOM05D000570 ORTHO05D005344 1.1e-11 75.9 114 43.0
GSVIVG01033522001 Vitis vinifera HOM05D000570 ORTHO05D005344 1.4e-11 75.5 120 40.0
MD12G1060500 Malus domestica HOM05D000570 ORTHO05D005344 2.4e-11 74.7 120 40.8
Oeu033186.1 Olea europaea HOM05D000570 ORTHO05D005344 4.1e-11 73.9 115 40.0
Migut.J01820 Erythranthe guttata HOM05D000570 ORTHO05D005344 5.3e-11 73.6 122 41.0
Cfa016901 Carpinus fangiana HOM05D000570 ORTHO05D005344 6.9e-11 73.2 121 39.7
Sed0012691 Sechium edule HOM05D000570 ORTHO05D005344 6.9e-11 73.2 121 39.7
Actinidia09383 Actinidia chinensis HOM05D000570 ORTHO05D005344 1.5e-10 72.0 122 41.0
CiPaw.10G027800 Carya illinoinensis HOM05D000570 ORTHO05D005344 2.0e-10 71.6 120 40.0
COL.COLO4_36137 Corchorus olitorius HOM05D000570 ORTHO05D005344 2.0e-10 71.6 114 41.2
Prupe.7G074000 Prunus persica HOM05D000570 ORTHO05D005344 2.0e-10 71.6 120 40.8
TAR623G1489 Trochodendron aralioides HOM05D000570 ORTHO05D005344 2.0e-10 71.6 256 31.2
Duzib128G1033 Durio zibethinus HOM05D000570 ORTHO05D005344 2.6e-10 71.2 120 38.3
HanXRQChr05g0132831 Helianthus annuus HOM05D000570 ORTHO05D005344 4.5e-10 70.5 120 39.2
MELO3C009641.2 Cucumis melo HOM05D000570 ORTHO05D005344 5.9e-10 70.1 121 38.0
TAR636G1287 Trochodendron aralioides HOM05D000570 ORTHO05D005344 5.9e-10 70.1 120 39.2
Psat6g092440 Pisum sativum HOM05D000570 ORTHO05D005344 1.0e-09 69.3 116 40.5
Sabra06G0146200 Salix brachista HOM05D000570 ORTHO05D005344 1.0e-09 69.3 121 38.8
Aqoxy1G00160 Aquilegia oxysepala HOM05D000570 ORTHO05D005344 1.3e-09 68.9 130 36.9
SalBow6G0661 Salvia bowleyana HOM05D000570 ORTHO05D005344 1.3e-09 68.9 119 36.1
TPR.G24915 Trifolium pratense HOM05D000570 ORTHO05D005344 1.3e-09 68.9 114 40.4
PGSC0003DMG400046949 Solanum tuberosum HOM05D000570 ORTHO05D395536 1.7e-09 68.6 127 38.6
MELO3C009642.2 Cucumis melo HOM05D000570 ORTHO05D005344 2.2e-09 68.2 116 41.4
CsaV3_3G038980 Cucumis sativus L. HOM05D000570 ORTHO05D005344 2.2e-09 68.2 123 38.2
Lsat_1_v5_gn_8_75600 Lactuca sativa HOM05D000570 ORTHO05D005344 2.2e-09 68.2 120 38.3
Medtr1g053525 Medicago truncatula HOM05D000570 ORTHO05D005344 2.2e-09 68.2 114 40.4
Phvul.007G258000 Phaseolus vulgaris HOM05D000570 ORTHO05D005344 2.2e-09 68.2 114 39.5
TWI77G0256 Tripterygium wilfordii HOM05D000570 ORTHO05D005344 3.8e-09 67.4 120 38.3
VMungo0720G2297 Vigna mungo HOM05D000570 ORTHO05D005344 3.8e-09 67.4 114 39.5
CsaV3_3G038990 Cucumis sativus L. HOM05D000570 ORTHO05D005344 6.5e-09 66.6 116 40.5
Glyma.02G177000 Glycine max HOM05D000570 ORTHO05D005344 6.5e-09 66.6 175 30.3
CANSAT64G1251 Cannabis sativa HOM05D000570 ORTHO05D005344 8.5e-09 66.2 118 36.4
SGA_v2.0_scaffold105G30477 Striga asiatica HOM05D006381 ORTHO05D005344 8.5e-09 66.2 122 37.7
Ca_26116_v3 Cicer arietinum L. HOM05D000570 ORTHO05D005344 1.1e-08 65.9 116 37.9
Eucgr.A02440 Eucalyptus grandis HOM05D000570 ORTHO05D005344 1.1e-08 65.9 119 39.5
Potri.006G190700 Populus trichocarpa HOM05D000570 ORTHO05D005344 1.1e-08 65.9 121 36.4
RcHm_v2.0_Chr3g0480221 Rosa chinensis HOM05D000570 ORTHO05D005344 1.1e-08 65.9 120 39.2
Manes.09G032500 Manihot esculenta HOM05D000570 ORTHO05D005344 1.4e-08 65.5 128 39.1
Sc13g0002150 Simmondsia chinensis HOM05D000570 ORTHO05D005344 1.9e-08 65.1 115 37.4
FvH4_6g22660 Fragaria vesca HOM05D000570 ORTHO05D005344 2.5e-08 64.7 120 35.0
FAN14G2151 Fragaria x ananassa HOM05D000570 ORTHO05D005344 2.5e-08 64.7 120 35.0
FAN14G3986 Fragaria x ananassa HOM05D000570 ORTHO05D005344 2.5e-08 64.7 120 35.0
Lalb_Chr21g0317081 Lupinus albus HOM05D000570 ORTHO05D005344 2.5e-08 64.7 114 37.7
DCAR_019838 Daucus carota HOM05D000570 ORTHO05D005344 3.2e-08 64.3 120 35.8
Lju124C29T10 Lonicera japonica HOM05D000570 ORTHO05D005344 3.2e-08 64.3 121 36.4
Ciclev10013344m.g Citrus clementina HOM05D000570 ORTHO05D005344 4.2e-08 63.9 120 37.5
Cpa.g.sc85.86 Carica papaya HOM05D000570 ORTHO05D005344 5.5e-08 63.5 117 39.3
AUR62012063 Chenopodium quinoa HOM05D000570 ORTHO05D005344 5.5e-08 63.5 120 38.3
ECA236G4278 Erigeron canadensis HOM05D000570 ORTHO05D005344 9.4e-08 62.8 120 38.3
AUR62024324 Chenopodium quinoa HOM05D000570 ORTHO05D005344 1.2e-07 62.4 120 36.7
FAN02G0851 Fragaria x ananassa HOM05D000570 ORTHO05D005344 1.2e-07 62.4 120 35.0
FAN05G1282 Fragaria x ananassa HOM05D000570 ORTHO05D005344 1.2e-07 62.4 120 34.2
Lalb_Chr18g0047751 Lupinus albus HOM05D000570 ORTHO05D005344 1.2e-07 62.4 116 40.5
Gohir.A09G126900 Gossypium hirsutum HOM05D000570 ORTHO05D005344 1.6e-07 62.0 120 35.8
THA.LOC104809924 Tarenaya hassleriana HOM05D000570 ORTHO05D005344 1.6e-07 62.0 121 36.4
Ah.13g076090 Amaranthus hybridus HOM05D000570 ORTHO05D005344 2.1e-07 61.6 114 36.0
arahy.Tifrunner.gnm1.ann1.7J08Q6 Arachis hypogaea HOM05D000570 ORTHO05D005344 2.1e-07 61.6 113 39.8
arahy.Tifrunner.gnm1.ann1.F2TBWJ Arachis hypogaea HOM05D000570 ORTHO05D005344 2.1e-07 61.6 113 39.8
EL10Ac3g06942 Beta vulgaris HOM05D000570 ORTHO05D005344 2.1e-07 61.6 129 32.6
FAN09G4228 Fragaria x ananassa HOM05D000570 ORTHO05D005344 2.1e-07 61.6 120 34.2
Glyma.10G091400 Glycine max HOM05D000570 ORTHO05D005344 2.1e-07 61.6 114 36.8
Gohir.D09G123280 Gossypium hirsutum HOM05D000570 ORTHO05D005344 2.1e-07 61.6 120 35.8
Gorai.006G141800 Gossypium raimondii HOM05D000570 ORTHO05D005344 2.1e-07 61.6 120 35.8
Ca_08507_v3 Cicer arietinum L. HOM05D000570 ORTHO05D005344 2.7e-07 61.2 112 38.4
arahy.Tifrunner.gnm1.ann1.2GY28N Arachis hypogaea HOM05D000570 ORTHO05D005344 4.6e-07 60.5 163 35.0
arahy.Tifrunner.gnm1.ann1.CB7VX4 Arachis hypogaea HOM05D004743 ORTHO05D005344 6.1e-07 60.1 163 35.0
Lj2C371T5 Lonicera japonica HOM05D000570 ORTHO05D005344 7.9e-07 59.7 121 37.2
Lj5g0016632 Lotus japonicus HOM05D000570 ORTHO05D005344 1.0e-06 59.3 181 31.5
TAR623G0681 Trochodendron aralioides HOM05D000570 ORTHO05D005344 1.8e-06 58.5 121 34.7
Zm00001eb234920 Zea mays HOM05D000570 ORTHO05D001174 1.8e-06 58.5 117 32.5
THA.LOC104826765 Tarenaya hassleriana HOM05D000570 ORTHO05D005344 2.3e-06 58.2 142 33.1
Lj1g0027895 Lotus japonicus HOM05D004743 ORTHO05D005344 3.0e-06 57.8 114 38.6
Os02g0190500 Oryza sativa ssp. japonica HOM05D000570 ORTHO05D001174 3.0e-06 57.8 115 33.0


User provided reference genes

Program Settings