Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G791.2 Capsicum annuum HOM05D004431 ORTHO05D005053 1.3e-41 172.6 81 100.0
CAN.G1387.2 Capsicum annuum HOM05D004431 ORTHO05D005053 3.2e-16 88.2 45 88.9
Sopen12g023680 Solanum pennellii HOM05D004431 ORTHO05D005053 3.9e-14 81.3 45 84.4
Solyc12g049230.2 Solanum lycopersicum HOM05D004431 ORTHO05D005053 1.9e-13 79.0 45 80.0
Peaxi162Scf00177g00416 Petunia axillaris HOM05D004431 ORTHO05D005053 9.5e-13 76.6 45 77.8
Nitab4.5_0003670g0020 Nicotiana tabacum HOM05D004431 ORTHO05D005053 2.1e-12 75.5 45 75.6
Nitab4.5_0000189g0240 Nicotiana tabacum HOM05D004431 ORTHO05D005053 6.2e-12 73.9 45 73.3
arahy.Tifrunner.gnm1.ann1.BWR49H Arachis hypogaea HOM05D004431 ORTHO05D005053 5.2e-11 70.9 51 60.8
arahy.Tifrunner.gnm1.ann1.R6GQUS Arachis hypogaea HOM05D004431 ORTHO05D005053 5.2e-11 70.9 51 60.8
Cfa003544 Carpinus fangiana HOM05D004431 ORTHO05D005053 6.8e-11 70.5 49 65.3
Haze_16016 Corylus avellana HOM05D004431 ORTHO05D005053 8.9e-11 70.1 49 65.3
CiPaw.02G136800 Carya illinoinensis HOM05D004431 ORTHO05D005053 1.2e-10 69.7 49 65.3
Glyma.07G036600 Glycine max HOM05D004431 ORTHO05D005053 1.2e-10 69.7 53 60.4
VMungo0331G0816 Vigna mungo HOM05D004431 ORTHO05D005053 1.2e-10 69.7 53 62.3
Lalb_Chr25g0281161 Lupinus albus HOM05D004431 ORTHO05D005053 2.6e-10 68.6 49 59.2
GSVIVG01016781001 Vitis vinifera HOM05D004431 ORTHO05D005053 2.6e-10 68.6 49 65.3
Actinidia39085 Actinidia chinensis HOM05D004431 ORTHO05D005053 3.4e-10 68.2 49 65.3
MELO3C025812.2 Cucumis melo HOM05D004431 ORTHO05D005053 3.4e-10 68.2 48 62.5
Lj3g0020734 Lotus japonicus HOM05D004431 ORTHO05D005053 4.4e-10 67.8 48 62.5
Lalb_Chr01g0013561 Lupinus albus HOM05D004431 ORTHO05D005053 4.4e-10 67.8 49 59.2
CiPaw.01G220700 Carya illinoinensis HOM05D004431 ORTHO05D005053 7.5e-10 67.0 47 66.0
Dinv04026 Davidia involucrata HOM05D004431 ORTHO05D005053 9.9e-10 66.6 49 63.3
ClCG07G013980 Citrullus lanatus HOM05D004431 ORTHO05D005053 1.3e-09 66.2 48 62.5
Sed0008578 Sechium edule HOM05D004431 ORTHO05D005053 1.3e-09 66.2 48 62.5
TWI79G0584 Tripterygium wilfordii HOM05D004431 ORTHO05D005053 1.3e-09 66.2 49 61.2
FAN02G1223 Fragaria x ananassa HOM05D004431 ORTHO05D005053 1.7e-09 65.9 49 59.2
FAN09G2590 Fragaria x ananassa HOM05D004431 ORTHO05D005053 1.7e-09 65.9 49 59.2
TWI31G0700 Tripterygium wilfordii HOM05D004431 ORTHO05D005053 2.2e-09 65.5 49 59.2
Actinidia26033 Actinidia chinensis HOM05D004431 ORTHO05D005053 2.9e-09 65.1 49 61.2
Ca_05011_v3 Cicer arietinum L. HOM05D004431 ORTHO05D005053 3.7e-09 64.7 49 57.1
FAN14G5417 Fragaria x ananassa HOM05D004431 ORTHO05D005053 3.7e-09 64.7 49 57.1
COL.COLO4_30777 Corchorus olitorius HOM05D004431 ORTHO05D005053 4.9e-09 64.3 46 58.7
Gohir.A10G052800 Gossypium hirsutum HOM05D004431 ORTHO05D005053 4.9e-09 64.3 49 61.2
Lj5A38T42 Lonicera japonica HOM05D004431 ORTHO05D005053 4.9e-09 64.3 49 59.2
Manes.04G143100 Manihot esculenta HOM05D004431 ORTHO05D005053 4.9e-09 64.3 49 63.3
CSS0015138 Camellia sinensis var. sinensis HOM05D004431 ORTHO05D005053 6.4e-09 63.9 49 59.2
CsaV3_3G043560 Cucumis sativus L. HOM05D004431 ORTHO05D005053 6.4e-09 63.9 52 55.8
Sabra01G0140500 Salix brachista HOM05D004431 ORTHO05D005053 6.4e-09 63.9 49 57.1
Sc12g0010510 Simmondsia chinensis HOM05D004431 ORTHO05D005053 6.4e-09 63.9 47 61.7
Gohir.D10G054600 Gossypium hirsutum HOM05D004431 ORTHO05D005053 8.3e-09 63.5 49 61.2
Gorai.011G058000 Gossypium raimondii HOM05D004431 ORTHO05D005053 8.3e-09 63.5 49 61.2
Sed0000839 Sechium edule HOM05D004431 ORTHO05D005053 1.1e-08 63.2 47 63.8
FvH4_6g34480 Fragaria vesca HOM05D004431 ORTHO05D005053 1.4e-08 62.8 49 55.1
FAN05G1075 Fragaria x ananassa HOM05D004431 ORTHO05D005053 1.4e-08 62.8 49 57.1
Peaxi162Scf00038g01825 Petunia axillaris HOM05D004431 ORTHO05D005053 1.4e-08 62.8 48 56.2
RcHm_v2.0_Chr2g0144801 Rosa chinensis HOM05D004431 ORTHO05D005053 1.4e-08 62.8 49 57.1
Thecc.06G118000 Theobroma cacao HOM05D004431 ORTHO05D005053 1.4e-08 62.8 49 59.2
Lsat_1_v5_gn_4_93840 Lactuca sativa HOM05D004431 ORTHO05D005053 1.9e-08 62.4 49 59.2
Psat4g183320 Pisum sativum HOM05D004431 ORTHO05D005053 1.9e-08 62.4 48 62.5
Lalb_Chr04g0263361 Lupinus albus HOM05D004431 ORTHO05D005053 2.4e-08 62.0 49 51.0
Glyma.16G006000 Glycine max HOM05D004431 ORTHO05D005053 3.2e-08 61.6 53 58.5
Duzib192G0474 Durio zibethinus HOM05D004431 ORTHO05D005053 4.1e-08 61.2 49 61.2
ECA232G4272 Erigeron canadensis HOM05D004431 ORTHO05D005053 4.1e-08 61.2 49 59.2
Manes.11G021900 Manihot esculenta HOM05D004431 ORTHO05D005053 4.1e-08 61.2 49 59.2
PGR119G2563 Punica granatum HOM05D004431 ORTHO05D005053 4.1e-08 61.2 48 58.3
Ciclev10024871m.g Citrus clementina HOM05D004431 ORTHO05D005053 5.4e-08 60.8 47 59.6
Duzib160G0723 Durio zibethinus HOM05D004431 ORTHO05D005053 7.1e-08 60.5 49 59.2
QL05p008292 Quercus lobata HOM05D004431 ORTHO05D005053 1.2e-07 59.7 51 60.8
Potri.001G170700 Populus trichocarpa HOM05D004431 ORTHO05D005053 2.7e-07 58.5 49 59.2
Duzib235G1186 Durio zibethinus HOM05D004431 ORTHO05D005053 3.5e-07 58.2 48 60.4
Hund18691 Selenicereus undatus HOM05D004431 ORTHO05D005053 3.5e-07 58.2 49 53.1
Cc04_g01450 Coffea canephora HOM05D004431 ORTHO05D005053 4.6e-07 57.8 47 57.4
Prupe.3G043500 Prunus persica HOM05D004431 ORTHO05D005053 4.6e-07 57.8 53 49.1
Rhsim12G0209100 Rhododendron simsii HOM05D004431 ORTHO05D005053 4.6e-07 57.8 47 57.4
HanXRQChr09g0276761 Helianthus annuus HOM05D004431 ORTHO05D005053 6.0e-07 57.4 47 55.3
Nn8g38722 Nelumbo nucifera HOM05D004431 ORTHO05D005053 6.0e-07 57.4 48 52.1
Cpa.g.sc25.101 Carica papaya HOM05D004431 ORTHO05D005053 7.8e-07 57.0 50 52.0
Potri.003G063300 Populus trichocarpa HOM05D004431 ORTHO05D005053 7.8e-07 57.0 49 49.0
Eucgr.F03171 Eucalyptus grandis HOM05D004431 ORTHO05D005053 1.0e-06 56.6 49 55.1
MD17G1170400 Malus domestica HOM05D004431 ORTHO05D005053 1.3e-06 56.2 44 56.8
AUR62001498 Chenopodium quinoa HOM05D004431 ORTHO05D005053 2.3e-06 55.5 55 49.1
TAR383G0937 Trochodendron aralioides HOM05D004431 ORTHO05D005053 2.3e-06 55.5 48 50.0
MD09G1185800 Malus domestica HOM05D004431 ORTHO05D005053 3.0e-06 55.1 53 50.9
Medtr8g019650 Medicago truncatula HOM05D004431 ORTHO05D005053 3.0e-06 55.1 54 51.9
SGA_v2.0_scaffold71G23865 Striga asiatica HOM05D004431 ORTHO05D005053 3.0e-06 55.1 51 51.0
EL10Ac7g16396 Beta vulgaris HOM05D004431 ORTHO05D005053 3.9e-06 54.7 45 55.6
Migut.I01062 Erythranthe guttata HOM05D004431 ORTHO05D005053 3.9e-06 54.7 52 50.0
Aqoxy7G04104 Aquilegia oxysepala HOM05D004431 ORTHO05D005053 5.1e-06 54.3 45 51.1
Carub.0003s1357 Capsella rubella HOM05D004431 ORTHO05D005053 5.1e-06 54.3 46 47.8


User provided reference genes

Program Settings