Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G790.5 Capsicum annuum HOM05D002510 ORTHO05D006928 2.2e-134 482.3 235 100.0
CAN.G131.8 Capsicum annuum HOM05D002510 ORTHO05D006928 2.2e-70 269.6 136 95.6
PGSC0003DMG400033889 Solanum tuberosum HOM05D002510 ORTHO05D006928 2.7e-68 262.7 136 91.2
Nitab4.5_0002524g0010 Nicotiana tabacum HOM05D002510 ORTHO05D006928 4.6e-68 261.9 146 86.3
Nitab4.5_0001053g0060 Nicotiana tabacum HOM05D002510 ORTHO05D006928 2.3e-67 259.6 146 85.6
Solyc04g025240.2 Solanum lycopersicum HOM05D002510 ORTHO05D006928 7.7e-63 244.6 143 82.5
DCAR_019102 Daucus carota HOM05D002510 ORTHO05D006928 7.2e-61 238.0 136 78.7
TPR.G1934 Trifolium pratense HOM05D002510 ORTHO05D006928 1.6e-60 236.9 243 49.4
Oeu031347.1 Olea europaea HOM05D002510 ORTHO05D006928 7.9e-60 234.6 136 80.1
Eucgr.G02836 Eucalyptus grandis HOM05D002510 ORTHO05D006928 1.8e-59 233.4 143 76.2
Potri.008G039300 Populus trichocarpa HOM05D002510 ORTHO05D006928 3.9e-59 232.3 146 74.7
Sopen04g011630 Solanum pennellii HOM05D002510 ORTHO05D006928 2.5e-58 229.6 138 82.6
Lj5g0027397 Lotus japonicus HOM05D002510 ORTHO05D006928 5.7e-58 228.4 136 76.5
Ca_10569_v3 Cicer arietinum L. HOM05D002800 ORTHO05D008563 7.4e-58 228.0 187 61.0
Cc02_g11320 Coffea canephora HOM05D002510 ORTHO05D006928 7.4e-58 228.0 136 76.5
Prupe.2G213200 Prunus persica HOM05D002510 ORTHO05D006928 7.4e-58 228.0 136 75.7
GSVIVG01016268001 Vitis vinifera HOM05D002510 ORTHO05D006928 9.7e-58 227.6 136 75.7
Duzib114G0372 Durio zibethinus HOM05D002510 ORTHO05D006928 1.3e-57 227.3 136 74.3
Psat6g183480 Pisum sativum HOM05D002510 ORTHO05D006928 1.3e-57 227.3 136 75.7
CSS0017911 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 2.2e-57 226.5 136 75.0
Dinv31320 Davidia involucrata HOM05D002510 ORTHO05D006928 2.2e-57 226.5 146 71.2
Phvul.007G094800 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 2.2e-57 226.5 136 74.3
Sabra08G0027000 Salix brachista HOM05D002510 ORTHO05D006928 2.2e-57 226.5 136 75.7
Gohir.A10G205600 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.8e-57 225.3 136 74.3
Gohir.D10G213800 Gossypium hirsutum HOM05D002510 ORTHO05D006928 4.8e-57 225.3 136 74.3
Lalb_Chr02g0142201 Lupinus albus HOM05D002510 ORTHO05D006928 6.3e-57 224.9 136 74.3
MD07G1174400 Malus domestica HOM05D002510 ORTHO05D006928 6.3e-57 224.9 136 75.0
Medtr1g095000 Medicago truncatula HOM05D002510 ORTHO05D006928 6.3e-57 224.9 136 75.0
arahy.Tifrunner.gnm1.ann1.D0MVTX Arachis hypogaea HOM05D002510 ORTHO05D006928 1.1e-56 224.2 136 74.3
Lj1C913T4 Lonicera japonica HOM05D002510 ORTHO05D006928 1.1e-56 224.2 153 66.7
Glyma.10G210800 Glycine max HOM05D002510 ORTHO05D006928 1.4e-56 223.8 136 74.3
MSTRG.9172 Avicennia marina HOM05D002510 ORTHO05D006928 1.8e-56 223.4 136 75.7
PGR142G1169 Punica granatum HOM05D002510 ORTHO05D006928 2.4e-56 223.0 149 69.8
Gorai.011G239300 Gossypium raimondii HOM05D002510 ORTHO05D006928 3.1e-56 222.6 146 70.5
MD01G1108300 Malus domestica HOM05D002510 ORTHO05D006928 3.1e-56 222.6 136 73.5
Manes.07G100200 Manihot esculenta HOM05D002510 ORTHO05D006928 3.1e-56 222.6 136 72.1
Sed0007153 Sechium edule HOM05D002510 ORTHO05D006928 3.1e-56 222.6 146 70.5
Dinv36437 Davidia involucrata HOM05D002510 ORTHO05D006928 4.1e-56 222.2 136 73.5
MELO3C019798.2 Cucumis melo HOM05D002510 ORTHO05D006928 6.9e-56 221.5 136 70.6
CsaV3_6G036450 Cucumis sativus L. HOM05D002510 ORTHO05D006928 6.9e-56 221.5 136 70.6
arahy.Tifrunner.gnm1.ann1.B5KM0B Arachis hypogaea HOM05D002510 ORTHO05D006928 9.1e-56 221.1 136 73.5
ClCG08G007520 Citrullus lanatus HOM05D002510 ORTHO05D006928 1.2e-55 220.7 136 70.6
Duzib128G0305 Durio zibethinus HOM05D002510 ORTHO05D006928 1.2e-55 220.7 136 70.6
Migut.F01984 Erythranthe guttata HOM05D002510 ORTHO05D006928 1.2e-55 220.7 136 74.3
Thecc.10G074800 Theobroma cacao HOM05D002510 ORTHO05D006928 1.2e-55 220.7 136 72.1
Glyma.20G179800 Glycine max HOM05D002510 ORTHO05D006928 1.5e-55 220.3 136 72.8
CiPaw.01G272400 Carya illinoinensis HOM05D002510 ORTHO05D006928 2.0e-55 219.9 135 73.3
FAN01G2940 Fragaria x ananassa HOM05D002510 ORTHO05D007210 3.4e-55 219.2 136 71.3
THA.LOC104827063 Tarenaya hassleriana HOM05D002510 ORTHO05D006928 3.4e-55 219.2 136 72.1
FvH4_7g19440 Fragaria vesca HOM05D002510 ORTHO05D006928 4.5e-55 218.8 136 70.6
FAN03G1741 Fragaria x ananassa HOM05D002510 ORTHO05D006928 4.5e-55 218.8 136 70.6
FAN10G0968 Fragaria x ananassa HOM05D002510 ORTHO05D007210 4.5e-55 218.8 136 70.6
FAN10G3768 Fragaria x ananassa HOM05D002510 ORTHO05D007210 4.5e-55 218.8 136 70.6
Haze_16887 Corylus avellana HOM05D002510 ORTHO05D006928 5.9e-55 218.4 138 72.5
FAN06G0282 Fragaria x ananassa HOM05D002510 ORTHO05D006928 5.9e-55 218.4 136 70.6
Lalb_Chr06g0162351 Lupinus albus HOM05D002510 ORTHO05D006928 5.9e-55 218.4 136 72.8
Hund12054 Selenicereus undatus HOM05D002510 ORTHO05D006928 5.9e-55 218.4 136 69.9
RcHm_v2.0_Chr1g0363321 Rosa chinensis HOM05D002510 ORTHO05D006928 7.7e-55 218.0 136 70.6
HanXRQChr14g0456861 Helianthus annuus HOM05D002510 ORTHO05D006928 2.2e-54 216.5 136 68.4
Potri.010G222900 Populus trichocarpa HOM05D002510 ORTHO05D006928 2.2e-54 216.5 136 70.6
Sc20g0001820 Simmondsia chinensis HOM05D002510 ORTHO05D006928 2.2e-54 216.5 137 70.8
QL08p055746 Quercus lobata HOM05D002510 ORTHO05D006928 5.0e-54 215.3 136 70.6
AL4G36300 Arabidopsis lyrata HOM05D002510 ORTHO05D006928 1.9e-53 213.4 135 70.4
Actinidia06769 Actinidia chinensis HOM05D002510 ORTHO05D006928 4.2e-53 212.2 153 66.7
TAR369G0428 Trochodendron aralioides HOM05D002510 ORTHO05D006928 4.2e-53 212.2 136 69.1
AT2G39000 Arabidopsis thaliana HOM05D002510 ORTHO05D006928 5.5e-53 211.8 135 68.9
Carub.0004s2104 Capsella rubella HOM05D002510 ORTHO05D006928 5.5e-53 211.8 135 68.9
EL10Ac3g05855 Beta vulgaris HOM05D002510 ORTHO05D006928 7.2e-53 211.5 136 69.1
Thhalv10017009m.g Eutrema salsugineum HOM05D002510 ORTHO05D006928 9.4e-53 211.1 135 68.9
Ah.10g032650 Amaranthus hybridus HOM05D002510 ORTHO05D006928 1.2e-52 210.7 136 69.9
Lsat_1_v5_gn_2_112320 Lactuca sativa HOM05D002510 ORTHO05D006928 1.2e-52 210.7 154 62.3
Gohir.A10G205500 Gossypium hirsutum HOM05D002510 ORTHO05D006928 1.6e-52 210.3 136 69.9
Sp4g21360 Schrenkiella parvula HOM05D002510 ORTHO05D006928 1.6e-52 210.3 135 68.1
BraA04t18437Z Brassica rapa HOM05D002510 ORTHO05D006928 2.1e-52 209.9 144 66.0
Nn2g10810 Nelumbo nucifera HOM05D002510 ORTHO05D006928 2.1e-52 209.9 136 69.1
SalBow4G2249 Salvia bowleyana HOM05D002510 ORTHO05D006928 2.1e-52 209.9 130 75.4
Aa31LG5G20680 Aethionema arabicum HOM05D002510 ORTHO05D006928 2.7e-52 209.5 133 69.9
BcaC02g12914 Brassica carinata HOM05D002510 ORTHO05D006928 3.6e-52 209.1 135 68.1
C04p67010 Brassica napus HOM05D002510 ORTHO05D006928 3.6e-52 209.1 135 68.1
BolC4t28203H Brassica oleracea HOM05D002510 ORTHO05D006928 3.6e-52 209.1 135 68.1
TWI15G0405 Tripterygium wilfordii HOM05D002510 ORTHO05D006928 3.6e-52 209.1 164 64.0
A04p29730 Brassica napus HOM05D002510 ORTHO05D006928 1.0e-51 207.6 138 68.1
Atru.chr12.758 Acer truncatum HOM05D002510 ORTHO05D006928 1.4e-51 207.2 136 69.9
AUR62037755 Chenopodium quinoa HOM05D002510 ORTHO05D006928 2.3e-51 206.5 136 69.9
Ciclev10032329m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.3e-51 206.5 136 68.4
AUR62018249 Chenopodium quinoa HOM05D002510 ORTHO05D006928 3.9e-51 205.7 135 69.6
Actinidia38854 Actinidia chinensis HOM05D002510 ORTHO05D006928 6.7e-51 204.9 152 64.5
Sabra10G0172300 Salix brachista HOM05D002510 ORTHO05D006928 6.7e-51 204.9 136 68.4
Peaxi162Scf01719g00013 Petunia axillaris HOM05D002510 ORTHO05D006928 3.3e-50 202.6 114 85.1
TAR623G0044 Trochodendron aralioides HOM05D002510 ORTHO05D006928 4.4e-50 202.2 145 63.4
PSO063G7611 Papaver somniferum HOM05D002510 ORTHO05D006928 1.7e-49 200.3 136 62.5
vmacro07070 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 2.8e-49 199.5 147 67.3
CARHR133780 Cardamine hirsuta HOM05D002510 ORTHO05D006928 6.3e-49 198.4 136 66.2
Aqoxy1G01228 Aquilegia oxysepala HOM05D002510 ORTHO05D006928 8.2e-49 198.0 136 64.7
PSO339G5277 Papaver somniferum HOM05D002510 ORTHO05D006928 1.4e-48 197.2 136 62.5
Lj3g0006441 Lotus japonicus HOM05D002510 ORTHO05D006928 2.0e-47 193.4 136 68.4
vmacro04869 Vaccinium macrocarpon HOM05D002510 ORTHO05D006928 2.0e-47 193.4 138 66.7
Glyma.02G074000 Glycine max HOM05D002510 ORTHO05D006928 2.2e-46 189.9 141 65.2
CSS0006577 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.0e-46 188.7 147 61.2
CSS0041581 Camellia sinensis var. sinensis HOM05D002510 ORTHO05D006928 5.0e-46 188.7 147 61.2
CDE04G1444 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 9.4e-45 184.5 136 61.8
Rhsim03G0120400 Rhododendron simsii HOM05D002510 ORTHO05D006928 9.4e-45 184.5 137 65.7
CDE06G2540 Ceratophyllum demersum HOM05D002510 ORTHO05D006928 6.1e-44 181.8 136 60.3
Phvul.004G083200 Phaseolus vulgaris HOM05D002510 ORTHO05D006928 6.1e-44 181.8 141 61.7
VMungo1197G0001 Vigna mungo HOM05D002510 ORTHO05D006928 5.2e-43 178.7 141 61.0
HPP92_014717 Vanilla planifolia HOM05D002510 ORTHO05D006928 6.7e-43 178.3 135 57.8
Lalb_Chr03g0035921 Lupinus albus HOM05D002510 ORTHO05D006928 1.1e-42 177.6 141 58.2
ATR0048G011 Amborella trichopoda HOM05D002510 ORTHO05D006928 4.4e-42 175.6 136 61.0
SGA_v2.0_scaffold62G21410 Striga asiatica HOM05D002510 ORTHO05D006928 7.5e-42 174.9 122 66.4
Migut.F01753 Erythranthe guttata HOM05D002510 ORTHO05D006928 6.3e-41 171.8 137 59.1
Os02g0806000 Oryza sativa ssp. japonica HOM05D002510 ORTHO05D006928 3.1e-40 169.5 135 56.3
Lj3g0019343 Lotus japonicus HOM05D002510 ORTHO05D006928 1.6e-39 167.2 138 59.4
VMungo0464G1224 Vigna mungo HOM05D002510 ORTHO05D006928 2.7e-39 166.4 145 57.9
Lj2g0015916 Lotus japonicus HOM05D002510 ORTHO05D006928 2.9e-38 162.9 135 62.2
Zm00001eb172140 Zea mays HOM05D002510 ORTHO05D006928 2.9e-38 162.9 132 58.3
unitig_88.g27817 Utricularia gibba HOM05D002510 ORTHO05D006928 6.8e-35 151.8 136 56.6
arahy.Tifrunner.gnm1.ann1.DB5KD4 Arachis hypogaea HOM05D002510 ORTHO05D006928 2.6e-34 149.8 155 52.9
SEGI_15474 Sequoiadendron giganteum HOM05D002510 ORTHO05D006928 5.7e-34 148.7 139 49.6
arahy.Tifrunner.gnm1.ann1.L5PTYD Arachis hypogaea HOM05D002510 ORTHO05D006928 9.8e-34 147.9 155 52.3
ECA238G3090 Erigeron canadensis HOM05D002510 ORTHO05D006928 4.8e-33 145.6 136 50.7
Cpa.g.sc53.85 Carica papaya HOM05D002510 ORTHO05D006928 5.0e-30 135.6 89 68.5
Haze_18780 Corylus avellana HOM05D000278 ORTHO05D005754 1.4e-27 127.5 162 44.4
Atru.chr12.782 Acer truncatum HOM05D002510 ORTHO05D006928 1.2e-26 124.4 89 65.2
SalBow3G0053 Salvia bowleyana HOM05D002510 ORTHO05D006928 1.5e-26 124.0 80 68.8
Gohir.D10G213900 Gossypium hirsutum HOM05D002510 ORTHO05D006928 2.0e-26 123.6 80 70.0
Oeu014386.1 Olea europaea HOM05D002510 ORTHO05D006928 2.2e-25 120.2 80 65.0
Glyma.16G155400 Glycine max HOM05D002510 ORTHO05D006928 3.7e-25 119.4 124 52.4
Ciclev10024578m.g Citrus clementina HOM05D002510 ORTHO05D006928 2.7e-23 113.2 90 56.7
Mapoly0033s0159 Marchantia polymorpha HOM05D002510 ORTHO05D006928 1.5e-18 97.4 130 37.7
Nn3g20716 Nelumbo nucifera HOM05D002510 ORTHO05D006928 2.9e-17 93.2 130 43.8
SMO134G0014 Selaginella moellendorffii HOM05D002510 ORTHO05D006928 6.6e-14 82.0 127 38.6
AagrBONN_evm.TU.Sc2ySwM_117.96 Anthoceros agrestis HOM05D000001 ORTHO05D000003 3.4e-10 69.7 101 39.6
Actinidia37356 Actinidia chinensis HOM05D002510 ORTHO05D006928 1.3e-06 57.8 54 53.7


User provided reference genes

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