Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G79.55 Capsicum annuum HOM05D007489 ORTHO05D008037 0.0e+00 1457.2 811 100.0
Sopen02g022090 Solanum pennellii HOM05D007489 ORTHO05D008037 0.0e+00 1097.4 853 75.6
Nitab4.5_0001928g0060 Nicotiana tabacum HOM05D007489 ORTHO05D008037 4.7e-277 958.0 805 71.1
Nitab4.5_0000376g0220 Nicotiana tabacum HOM05D007489 ORTHO05D008037 1.2e-192 677.6 823 56.0
Solyc02g077210.1 Solanum lycopersicum HOM05D007489 ORTHO05D008037 4.2e-108 396.7 267 79.8
Peaxi162Scf00223g01419 Petunia axillaris HOM05D007489 ORTHO05D008037 3.0e-90 337.4 308 63.3
CSS0034374 Camellia sinensis var. sinensis HOM05D007489 ORTHO05D008037 1.3e-77 295.4 853 33.4
Oeu041109.2 Olea europaea HOM05D007489 ORTHO05D008037 1.4e-66 258.8 917 29.9
Dinv40650 Davidia involucrata HOM05D007489 ORTHO05D008037 8.2e-64 249.6 839 31.5
Rhsim02G0140400 Rhododendron simsii HOM05D007489 ORTHO05D008037 2.4e-63 248.1 879 31.6
Hma1.2p1_0155F.1_g068400 Hydrangea macrophylla HOM05D007489 ORTHO05D008037 1.5e-62 245.4 847 31.4
Prupe.4G057700 Prunus persica HOM05D007489 ORTHO05D008037 6.5e-61 240.0 814 32.3
TAR627G1016 Trochodendron aralioides HOM05D007489 ORTHO05D008037 2.1e-59 235.0 859 32.2
Peaxi162Scf00223g01422 Petunia axillaris HOM05D007489 ORTHO05D008037 9.7e-57 226.1 243 63.4
Lj1A1196T41 Lonicera japonica HOM05D007489 ORTHO05D008037 3.1e-55 221.1 792 29.4
MD10G1283800 Malus domestica HOM05D007489 ORTHO05D008037 5.3e-55 220.3 843 28.9
Duzib235G0638 Durio zibethinus HOM05D007489 ORTHO05D008037 1.2e-54 219.2 857 30.3
HanXRQChr11g0327141 Helianthus annuus HOM05D007489 ORTHO05D008037 3.2e-52 211.1 831 30.8
ECA234G3308 Erigeron canadensis HOM05D007489 ORTHO05D008037 4.7e-51 207.2 847 30.2
TPR.G16271 Trifolium pratense HOM05D007489 ORTHO05D008037 8.0e-51 206.5 858 31.9
Potri.011G063500 Populus trichocarpa HOM05D007489 ORTHO05D008037 1.8e-50 205.3 820 28.0
RcHm_v2.0_Chr7g0215591 Rosa chinensis HOM05D007489 ORTHO05D008037 2.3e-50 204.9 838 30.3
Lsat_1_v5_gn_4_50401 Lactuca sativa HOM05D007489 ORTHO05D008037 5.7e-49 200.3 854 29.5
Medtr4g087875 Medicago truncatula HOM05D007489 ORTHO05D008037 5.7e-49 200.3 865 31.3
Sabra11G0045300 Salix brachista HOM05D007489 ORTHO05D008037 2.8e-48 198.0 866 28.1
PGSC0003DMG400022951 Solanum tuberosum HOM05D007489 ORTHO05D008037 8.3e-48 196.4 163 73.0
ClCG01G023550 Citrullus lanatus HOM05D007489 ORTHO05D008037 3.5e-46 191.0 827 30.2
FAN08G0692 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.5e-46 190.7 874 28.3
Gohir.D10G031400 Gossypium hirsutum HOM05D007489 ORTHO05D008037 2.2e-45 188.3 853 27.7
Manes.16G035700 Manihot esculenta HOM05D007489 ORTHO05D008037 3.2e-44 184.5 968 26.8
Migut.J01535 Erythranthe guttata HOM05D007489 ORTHO05D008037 4.2e-44 184.1 789 28.9
Duzib192G0524 Durio zibethinus HOM05D007489 ORTHO05D008037 1.6e-43 182.2 850 28.4
FAN04G2784 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.6e-43 181.0 873 27.9
Sed0003654 Sechium edule HOM05D007489 ORTHO05D008037 4.7e-43 180.6 814 29.4
Sc05g0007220 Simmondsia chinensis HOM05D007489 ORTHO05D008037 1.8e-42 178.7 904 27.8
FvH4_5g26040 Fragaria vesca HOM05D007489 ORTHO05D008037 2.3e-42 178.3 852 28.8
RcHm_v2.0_Chr7g0216741 Rosa chinensis HOM05D007489 ORTHO05D008037 1.2e-41 176.0 842 29.0
MELO3C007230.2 Cucumis melo HOM05D007489 ORTHO05D008037 3.4e-41 174.5 822 29.7
Nn1g09012 Nelumbo nucifera HOM05D007489 ORTHO05D008037 4.1e-39 167.5 814 28.4
FAN18G0613 Fragaria x ananassa HOM05D007489 ORTHO05D008037 3.5e-38 164.5 870 27.8
SalBow6G3268 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.5e-38 164.5 871 26.2
SalBow6G6000 Salvia bowleyana HOM05D007489 ORTHO05D008037 5.9e-38 163.7 871 25.9
Glyma.07G204500 Glycine max HOM05D007489 ORTHO05D008037 1.3e-37 162.5 835 27.9
Lj4g0021888 Lotus japonicus HOM05D007489 ORTHO05D008037 3.8e-37 161.0 827 29.5
PGR004G0633 Punica granatum HOM05D007489 ORTHO05D008037 5.0e-37 160.6 819 25.8
Aqoxy5G02160 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 3.6e-35 154.5 837 26.6
Phvul.003G057800 Phaseolus vulgaris HOM05D007489 ORTHO05D008037 3.6e-35 154.5 841 28.5
Thecc.06G175600 Theobroma cacao HOM05D007489 ORTHO05D008037 8.0e-35 153.3 815 28.7
AL7G35790 Arabidopsis lyrata HOM05D010718 ORTHO05D008037 1.8e-34 152.1 838 25.4
Gohir.A10G030500 Gossypium hirsutum HOM05D007489 ORTHO05D008037 1.8e-34 152.1 816 25.9
Gorai.011G033000 Gossypium raimondii HOM05D007489 ORTHO05D008037 1.8e-34 152.1 847 26.3
arahy.Tifrunner.gnm1.ann1.S0ULK2 Arachis hypogaea HOM05D007489 ORTHO05D008037 4.0e-34 151.0 821 27.5
AT4G18490 Arabidopsis thaliana HOM05D010718 ORTHO05D008037 1.3e-32 146.0 846 26.1
Haze_06275 Corylus avellana HOM05D007489 ORTHO05D008037 2.7e-30 138.3 860 25.1
Ca_26049_v3 Cicer arietinum L. HOM05D007489 ORTHO05D008037 1.0e-29 136.3 830 27.1
Atru.chr10.1727 Acer truncatum HOM05D007489 ORTHO05D008037 1.3e-29 136.0 269 36.4
CiPaw.10G057000 Carya illinoinensis HOM05D007489 ORTHO05D008037 1.3e-29 136.0 451 31.7
AUR62036546 Chenopodium quinoa HOM05D007489 ORTHO05D008037 1.3e-29 136.0 856 26.3
CANSAT54G0123 Cannabis sativa HOM05D007489 ORTHO05D008037 1.9e-28 132.1 850 26.4
Thhalv10024499m.g Eutrema salsugineum HOM05D010718 ORTHO05D008037 5.6e-28 130.6 808 25.2
PSO063G1126 Papaver somniferum HOM05D007489 ORTHO05D008037 6.2e-27 127.1 959 25.5
A03p51330 Brassica napus HOM05D010718 ORTHO05D008037 1.0e-26 126.3 844 24.3
SGA_v2.0_scaffold66G22379 Striga asiatica HOM05D007489 ORTHO05D008037 1.0e-26 126.3 875 25.0
CARHR225330 Cardamine hirsuta HOM05D010718 ORTHO05D008037 3.1e-26 124.8 857 26.5
BcaC06g30581 Brassica carinata HOM05D010718 ORTHO05D008037 8.9e-26 123.2 846 24.1
Aa31LG6G1240 Aethionema arabicum HOM05D010718 ORTHO05D008037 2.6e-25 121.7 808 25.5
Carub.0007s2274 Capsella rubella HOM05D010718 ORTHO05D008037 2.6e-25 121.7 845 23.6
EL10Ac8g20488 Beta vulgaris HOM05D007489 ORTHO05D008037 4.4e-25 120.9 866 24.2
FAN13G1982 Fragaria x ananassa HOM05D007489 ORTHO05D008037 4.4e-25 120.9 913 24.5
unitig_0.g132 Utricularia gibba HOM05D007489 ORTHO05D008037 9.8e-25 119.8 134 50.0
Sp7g15530 Schrenkiella parvula HOM05D010718 ORTHO05D008037 2.2e-24 118.6 887 24.2
GSVIVG01021171001 Vitis vinifera HOM05D007489 ORTHO05D008037 1.4e-23 115.9 261 34.1
QL05p044409 Quercus lobata HOM05D007489 ORTHO05D008037 1.9e-23 115.5 238 36.1
Hund23951 Selenicereus undatus HOM05D007489 ORTHO05D008037 3.2e-23 114.8 141 49.6
PGR004G2208 Punica granatum HOM05D007489 ORTHO05D008037 1.2e-22 112.8 125 51.2
Os01g0755100 Oryza sativa ssp. japonica HOM05D007489 ORTHO05D008037 2.0e-22 112.1 822 26.8
A01p10500 Brassica napus HOM05D010718 ORTHO05D008037 4.6e-22 110.9 146 43.8
CsaV3_6G050690 Cucumis sativus L. HOM05D007489 ORTHO05D008037 7.8e-22 110.2 886 25.2
BraA03t14214Z Brassica rapa HOM05D010718 ORTHO05D008037 2.3e-21 108.6 823 23.6
C01p12440 Brassica napus HOM05D010718 ORTHO05D008037 3.0e-21 108.2 880 24.8
DCAR_004024 Daucus carota HOM05D007489 ORTHO05D008037 1.5e-20 105.9 328 31.7
BolC7t45475H Brassica oleracea HOM05D010718 ORTHO05D008037 2.5e-20 105.1 814 23.3
BraA01t00996Z Brassica rapa HOM05D010718 ORTHO05D008037 5.6e-20 104.0 877 23.6
arahy.Tifrunner.gnm1.ann1.X1E7Z2 Arachis hypogaea HOM05D007489 ORTHO05D008037 2.8e-19 101.7 816 25.5
MBI06_g31401_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 4.7e-19 100.9 102 53.9
BcaNung02709 Brassica carinata HOM05D010718 ORTHO05D008037 1.1e-18 99.8 818 23.8
DCAR_007972 Daucus carota HOM05D007489 ORTHO05D008037 5.2e-18 97.4 103 52.4
MD05G1304700 Malus domestica HOM05D007489 ORTHO05D008037 5.2e-18 97.4 149 44.3
C07p49740 Brassica napus HOM05D010718 ORTHO05D008037 8.9e-18 96.7 813 23.2
MBI06_g31402_MAGBIO Magnolia biondii HOM05D007489 ORTHO05D008037 8.9e-18 96.7 601 25.5
COL.COLO4_31347 Corchorus olitorius HOM05D007489 ORTHO05D008037 3.4e-17 94.7 924 24.6
Lalb_Chr16g0384211 Lupinus albus HOM05D007489 ORTHO05D008037 5.8e-17 94.0 424 29.2
Glyma.13G171550 Glycine max HOM05D007489 ORTHO05D008037 2.9e-16 91.7 142 41.5
Ciclev10017982m.g Citrus clementina HOM05D007489 ORTHO05D008037 1.4e-15 89.4 103 46.6
SEGI_30603 Sequoiadendron giganteum HOM05D007489 ORTHO05D008037 4.3e-12 77.8 111 44.1
Zm00001eb152860 Zea mays HOM05D007489 ORTHO05D008037 8.1e-11 73.6 826 24.9
SalBow2G2687 Salvia bowleyana HOM05D007489 ORTHO05D008037 3.1e-10 71.6 65 53.8
Aqoxy534s001 Aquilegia oxysepala HOM05D007489 ORTHO05D008037 5.2e-10 70.9 106 41.5
ATR0602G208 Amborella trichopoda HOM05D007489 ORTHO05D008037 6.8e-10 70.5 774 22.6
SalBow1G4805 Salvia bowleyana HOM05D007489 ORTHO05D008037 8.9e-10 70.1 65 53.8
BolC1t01218H Brassica oleracea HOM05D010718 ORTHO05D008037 1.3e-08 66.2 886 23.5
PSO782G2467 Papaver somniferum HOM05D007489 ORTHO05D008037 1.3e-08 66.2 172 36.6
arahy.Tifrunner.gnm1.ann1.8IS92U Arachis hypogaea HOM05D007489 ORTHO05D008037 2.9e-08 65.1 64 53.1
Cpa.g.sc7.37 Carica papaya HOM05D007489 ORTHO05D008037 2.9e-08 65.1 44 65.9
SMO340G0226 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.4e-07 62.8 59 50.8
VMungo0251G2273 Vigna mungo HOM05D007489 ORTHO05D008037 1.4e-07 62.8 570 25.3
SMO356G0683 Selaginella moellendorffii HOM05D029666 ORTHO05D008037 1.9e-07 62.4 59 50.8
Glyma.13G171600 Glycine max HOM05D007489 ORTHO05D008037 2.7e-06 58.5 71 50.7


User provided reference genes

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