Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G787.10 Capsicum annuum HOM05D005210 ORTHO05D010080 3.3e-128 461.8 251 100.0
Nitab4.5_0000299g0070 Nicotiana tabacum HOM05D005210 ORTHO05D010080 9.7e-64 247.7 200 72.5
Lj6g0026306 Lotus japonicus HOM05D005210 ORTHO05D010080 9.4e-59 231.1 215 58.6
Nn1g09997 Nelumbo nucifera HOM05D005210 ORTHO05D010080 9.4e-59 231.1 204 67.6
Nn1g10098 Nelumbo nucifera HOM05D005210 ORTHO05D010080 9.4e-59 231.1 204 67.6
Ciclev10012798m.g Citrus clementina HOM05D005210 ORTHO05D010080 3.0e-57 226.1 208 65.9
Atru.chr1.3624 Acer truncatum HOM05D005210 ORTHO05D010080 6.7e-57 224.9 210 66.7
PGR069G0003 Punica granatum HOM05D005210 ORTHO05D010080 1.5e-56 223.8 210 65.2
TPR.G32363 Trifolium pratense HOM05D005210 ORTHO05D010080 1.5e-56 223.8 208 60.1
TPR.G22447 Trifolium pratense HOM05D005210 ORTHO05D010080 1.7e-55 220.3 208 57.7
DCAR_032434 Daucus carota HOM05D005210 ORTHO05D010080 1.1e-54 217.6 196 65.8
Oeu020894.1 Olea europaea HOM05D005210 ORTHO05D010080 1.1e-54 217.6 203 59.6
Actinidia34888 Actinidia chinensis HOM05D005210 ORTHO05D010080 1.8e-54 216.9 192 68.8
Nitab4.5_0001761g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 6.9e-54 214.9 177 72.3
Medtr6g012880 Medicago truncatula HOM05D005210 ORTHO05D010080 4.5e-53 212.2 208 56.7
Cpa.g.sc38.57 Carica papaya HOM05D005210 ORTHO05D010080 2.2e-52 209.9 190 64.2
CAN.G1109.4 Capsicum annuum HOM05D005210 ORTHO05D010080 3.8e-52 209.1 136 89.7
Phvul.005G088636 Phaseolus vulgaris HOM05D005210 ORTHO05D010080 1.4e-51 207.2 209 64.1
Lsat_1_v5_gn_7_109460 Lactuca sativa HOM05D005210 ORTHO05D010080 5.5e-51 205.3 207 53.1
CAN.G110.12 Capsicum annuum HOM05D005210 ORTHO05D010080 2.1e-50 203.4 136 88.2
MBI04_g15069_MAGBIO Magnolia biondii HOM05D005210 ORTHO05D010080 1.1e-48 197.6 192 64.1
CANSAT78G1777 Cannabis sativa HOM05D005210 ORTHO05D010080 2.0e-48 196.8 203 61.6
AUR62004733 Chenopodium quinoa HOM05D005210 ORTHO05D010080 2.0e-48 196.8 210 52.9
Lalb_Chr03g0038991 Lupinus albus HOM05D005210 ORTHO05D010080 3.3e-48 196.1 151 76.8
AUR62037526 Chenopodium quinoa HOM05D005210 ORTHO05D010080 4.4e-48 195.7 216 51.4
arahy.Tifrunner.gnm1.ann1.00SNP9 Arachis hypogaea HOM05D005210 ORTHO05D010080 5.7e-48 195.3 191 63.9
arahy.Tifrunner.gnm1.ann1.883WGW Arachis hypogaea HOM05D005210 ORTHO05D010080 5.7e-48 195.3 191 63.9
VMungo0329G0007 Vigna mungo HOM05D005210 ORTHO05D010080 2.2e-47 193.4 187 67.4
Cfa023010 Carpinus fangiana HOM05D005210 ORTHO05D010080 3.7e-47 192.6 177 69.5
Nitab4.5_0001788g0200 Nicotiana tabacum HOM05D001750 ORTHO05D001825 8.2e-47 191.4 199 60.3
Potri.007G062102 Populus trichocarpa HOM05D005210 ORTHO05D010080 1.1e-46 191.0 205 58.5
Dinv06682 Davidia involucrata HOM05D005210 ORTHO05D010080 5.9e-45 185.3 172 66.3
Gohir.A10G200000 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.0e-44 184.5 212 50.0
arahy.Tifrunner.gnm1.ann1.QPLA3G Arachis hypogaea HOM05D005210 ORTHO05D010080 1.7e-44 183.7 182 63.2
Gohir.D10G207900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 2.9e-44 183.0 214 51.4
Nitab4.5_0006085g0020 Nicotiana tabacum HOM05D005210 ORTHO05D010080 2.9e-44 183.0 199 54.8
MELO3C028549.2 Cucumis melo HOM05D005210 ORTHO05D010080 5.0e-44 182.2 180 66.1
Gohir.A10G199900 Gossypium hirsutum HOM05D005210 ORTHO05D010080 1.1e-43 181.0 212 49.5
Gorai.011G233600 Gossypium raimondii HOM05D005210 ORTHO05D010080 1.1e-43 181.0 222 49.5
MSTRG.20585 Avicennia marina HOM05D005210 ORTHO05D010080 1.9e-43 180.3 203 52.2
RcHm_v2.0_MTg0498311 Rosa chinensis HOM05D005210 ORTHO05D010080 1.6e-42 177.2 138 77.5
Ah.03g133380 Amaranthus hybridus HOM05D005210 ORTHO05D010080 1.5e-40 170.6 201 46.8
PGSC0003DMG400020779 Solanum tuberosum HOM05D005210 ORTHO05D010080 2.0e-40 170.2 291 45.4
Lalb_Chr02g0153671 Lupinus albus HOM05D005210 ORTHO05D010080 2.6e-40 169.9 184 61.4
Ca_15051_v3 Cicer arietinum L. HOM05D001750 ORTHO05D010080 3.3e-40 169.5 135 76.3
Migut.B01305 Erythranthe guttata HOM05D005210 ORTHO05D010080 5.7e-40 168.7 209 46.9
Aqoxy4G00327 Aquilegia oxysepala HOM05D005210 ORTHO05D010080 7.5e-40 168.3 212 47.2
SGA_v2.0_scaffold119G32726 Striga asiatica HOM05D005210 ORTHO05D010080 7.5e-40 168.3 205 48.3
ECA236G2402 Erigeron canadensis HOM05D005210 ORTHO05D010080 9.7e-40 167.9 210 43.8
SGA_v2.0_scaffold167G38415 Striga asiatica HOM05D005210 ORTHO05D010080 2.4e-38 163.3 199 47.7
SalBow8G1406 Salvia bowleyana HOM05D005210 ORTHO05D010080 7.0e-38 161.8 206 44.7
Nitab4.5_0000172g0080 Nicotiana tabacum HOM05D001750 ORTHO05D001825 1.6e-37 160.6 174 54.6
Ca_22167_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 2.2e-36 156.8 118 79.7
Ca_22168_v3 Cicer arietinum L. HOM05D001750 ORTHO05D001825 2.2e-36 156.8 118 79.7
Ca_22173_v3 Cicer arietinum L. HOM05D005210 ORTHO05D010080 2.2e-36 156.8 118 79.7
CsaV3_UNG210330 Cucumis sativus L. HOM05D001560 ORTHO05D004675 1.1e-35 154.5 127 77.2
unitig_750.g28447 Utricularia gibba HOM05D005210 ORTHO05D010080 1.5e-35 154.1 199 44.7
SEGI_01777 Sequoiadendron giganteum HOM05D005210 ORTHO05D010080 3.2e-35 152.9 221 44.3
Oeu061104.1 Olea europaea HOM05D000700 ORTHO05D010080 6.8e-33 145.2 148 56.8
Peaxi162Scf01462g00001 Petunia axillaris HOM05D005210 ORTHO05D010080 2.2e-31 140.2 102 85.3
GSVIVG01004978001 Vitis vinifera HOM05D005210 ORTHO05D010080 5.4e-30 135.6 156 51.3
CAN.G85.22 Capsicum annuum HOM05D002660 ORTHO05D003902 9.1e-30 134.8 97 85.6
RcHm_v2.0_Chr2g0148221 Rosa chinensis HOM05D005210 ORTHO05D010080 2.7e-29 133.3 127 57.5
Peaxi162Scf01267g00005 Petunia axillaris HOM05D005210 ORTHO05D010080 1.9e-27 127.1 154 53.9
Sed0004476 Sechium edule HOM05D005210 ORTHO05D010080 3.6e-26 122.9 91 87.9
QL04p020150 Quercus lobata HOM05D005210 ORTHO05D010080 1.4e-25 120.9 105 74.3
Nitab4.5_0003632g0030 Nicotiana tabacum HOM05D005210 ORTHO05D034847 1.2e-24 117.9 123 52.0
Nitab4.5_0000172g1800 Nicotiana tabacum HOM05D001750 ORTHO05D001825 9.2e-22 108.2 173 49.7
arahy.Tifrunner.gnm1.ann1.03NBHP Arachis hypogaea HOM05D005210 ORTHO05D010080 3.6e-18 96.3 92 72.8
Hma1.2p1_0038F.1_g024120 Hydrangea macrophylla HOM05D005210 ORTHO05D010080 4.0e-17 92.8 54 81.5
CDE02G1246 Ceratophyllum demersum HOM05D001325 ORTHO05D010080 8.9e-17 91.7 110 61.8
RcHm_v2.0_Chr2g0148231 Rosa chinensis HOM05D005210 ORTHO05D010080 2.6e-16 90.1 72 65.3
Ca_08792_v3 Cicer arietinum L. HOM05D000255 ORTHO05D028863 4.4e-16 89.4 76 80.3
Nitab4.5_0000345g0130 Nicotiana tabacum HOM05D005210 ORTHO05D010080 2.9e-15 86.7 71 87.3
CsaV3_5G017030 Cucumis sativus L. HOM05D005210 ORTHO05D010080 6.4e-15 85.5 109 48.6
Lalb_Chr17g0337341 Lupinus albus HOM05D005210 ORTHO05D010080 7.8e-13 78.6 77 54.5
CAN.G1.22 Capsicum annuum HOM05D024148 ORTHO05D024823 1.7e-12 77.4 38 94.7
CAN.G1.4 Capsicum annuum HOM05D002660 ORTHO05D003902 6.6e-12 75.5 37 94.6
Migut.B01023 Erythranthe guttata HOM05D005210 ORTHO05D010080 3.3e-11 73.2 183 35.0
Nitab4.5_0001152g0440 Nicotiana tabacum HOM05D005210 ORTHO05D010080 3.3e-11 73.2 73 52.1
arahy.Tifrunner.gnm1.ann1.ZXP4DA Arachis hypogaea HOM05D005210 ORTHO05D010080 9.5e-11 71.6 48 77.1
PGSC0003DMG400023637 Solanum tuberosum HOM05D005499 ORTHO05D006666 1.2e-10 71.2 53 73.6
Peaxi162Scf00016g00048 Petunia axillaris HOM05D005499 ORTHO05D006666 2.1e-10 70.5 53 69.8
CsaV3_5G020380 Cucumis sativus L. HOM05D005210 ORTHO05D010080 4.7e-10 69.3 59 69.5
Nitab4.5_0000593g0150 Nicotiana tabacum HOM05D005210 ORTHO05D010080 4.7e-10 69.3 134 43.3
Ciclev10017151m.g Citrus clementina HOM05D005210 ORTHO05D010080 8.0e-10 68.6 114 41.2
CAN.G505.4 Capsicum annuum HOM05D005210 ORTHO05D010080 4.0e-09 66.2 47 76.6
Nitab4.5_0012484g0010 Nicotiana tabacum HOM05D005499 ORTHO05D006666 8.9e-09 65.1 53 66.0
PGSC0003DMG400016154 Solanum tuberosum HOM05D005499 ORTHO05D006666 5.8e-08 62.4 53 66.0
Solyc11g010180.2 Solanum lycopersicum HOM05D005499 ORTHO05D006666 7.5e-08 62.0 52 67.3
Sopen11g004960 Solanum pennellii HOM05D005499 ORTHO05D006666 7.5e-08 62.0 52 67.3
Nitab4.5_0003764g0020 Nicotiana tabacum HOM05D005499 ORTHO05D006666 1.3e-07 61.2 53 62.3
Nitab4.5_0000743g0030 Nicotiana tabacum HOM05D005499 ORTHO05D006666 2.9e-07 60.1 53 64.2
CAN.G905.22 Capsicum annuum HOM05D005499 ORTHO05D006666 5.4e-06 55.8 34 73.5
Lalb_Chr03g0038471 Lupinus albus HOM05D005210 ORTHO05D010080 5.4e-06 55.8 48 58.3


User provided reference genes

Program Settings