Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G786.35 Capsicum annuum HOM05D000283 ORTHO05D006673 4.0e-99 364.8 184 100.0
PGSC0003DMG400011491 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.2e-50 203.8 136 74.3
Peaxi162Scf00135g00027 Petunia axillaris HOM05D000283 ORTHO05D006673 9.3e-48 194.1 141 72.3
PGSC0003DMG400011483 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.0e-46 190.7 142 72.5
Nitab4.5_0007221g0010 Nicotiana tabacum HOM05D000283 ORTHO05D006673 6.7e-46 188.0 141 70.9
Sopen04g005360 Solanum pennellii HOM05D000283 ORTHO05D006673 6.7e-46 188.0 142 71.1
Solyc04g010185.1 Solanum lycopersicum HOM05D000283 ORTHO05D006673 1.5e-45 186.8 142 71.8
Nitab4.5_0006737g0060 Nicotiana tabacum HOM05D000283 ORTHO05D006673 9.6e-45 184.1 142 70.4
PGSC0003DMG400011472 Solanum tuberosum HOM05D000283 ORTHO05D006673 2.8e-44 182.6 137 71.5
PGSC0003DMG400011471 Solanum tuberosum HOM05D000283 ORTHO05D006673 5.3e-43 178.3 153 64.7
PGSC0003DMG400011487 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.5e-42 176.8 137 70.8
PGSC0003DMG400039757 Solanum tuberosum HOM05D000283 ORTHO05D006673 5.1e-38 161.8 146 61.6
Sopen04g005350 Solanum pennellii HOM05D000283 ORTHO05D006673 1.6e-31 140.2 113 68.1
Sopen04g005270 Solanum pennellii HOM05D000283 ORTHO05D006673 4.6e-31 138.7 135 55.6
PGSC0003DMG400011488 Solanum tuberosum HOM05D000283 ORTHO05D006673 1.5e-29 133.7 106 66.0
PGSC0003DMG400011484 Solanum tuberosum HOM05D000283 ORTHO05D006673 4.1e-27 125.6 91 74.7
Sopen04g005330 Solanum pennellii HOM05D000283 ORTHO05D006673 9.0e-27 124.4 139 53.2
Sopen04g005310 Solanum pennellii HOM05D000283 ORTHO05D006673 1.9e-24 116.7 139 51.1
Sopen03g020140 Solanum pennellii HOM05D000002 ORTHO05D000001 2.5e-24 116.3 130 53.8
Sopen04g005300 Solanum pennellii HOM05D000283 ORTHO05D006673 5.5e-24 115.2 93 66.7
Cc02_g08660 Coffea canephora HOM05D000283 ORTHO05D006673 9.4e-24 114.4 135 50.4
Lj5g0015824 Lotus japonicus HOM05D000283 ORTHO05D006673 5.1e-22 108.6 155 45.8
Solyc04g010155.2 Solanum lycopersicum HOM05D000283 ORTHO05D006673 6.7e-22 108.2 122 50.8
CSS0006513 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.3e-20 104.0 142 42.3
CSS0040218 Camellia sinensis var. sinensis HOM05D000283 ORTHO05D006673 1.3e-20 104.0 142 42.3
Dinv25941 Davidia involucrata HOM05D000283 ORTHO05D004861 1.3e-20 104.0 141 42.6
MSTRG.27328 Avicennia marina HOM05D000283 ORTHO05D006673 2.2e-20 103.2 152 44.7
Sopen04g005280 Solanum pennellii HOM05D000283 ORTHO05D006673 6.3e-20 101.7 88 60.2
arahy.Tifrunner.gnm1.ann1.SA4FWZ Arachis hypogaea HOM05D000283 ORTHO05D006673 1.1e-19 100.9 150 42.0
arahy.Tifrunner.gnm1.ann1.U4C8JV Arachis hypogaea HOM05D000283 ORTHO05D006673 1.1e-19 100.9 150 42.0
Psat6g238520 Pisum sativum HOM05D000283 ORTHO05D006673 1.1e-19 100.9 137 44.5
GSVIVG01032629001 Vitis vinifera HOM05D000283 ORTHO05D006673 1.1e-19 100.9 140 40.7
Ca_11324_v3 Cicer arietinum L. HOM05D000283 ORTHO05D006673 1.4e-19 100.5 136 44.9
Oeu025162.3 Olea europaea HOM05D000283 ORTHO05D006673 5.3e-19 98.6 143 42.7
TPR.G10427 Trifolium pratense HOM05D000283 ORTHO05D006673 5.3e-19 98.6 136 44.1
Cfa001559 Carpinus fangiana HOM05D000283 ORTHO05D005391 3.4e-18 95.9 131 41.2
Cpa.g.sc1.302 Carica papaya HOM05D000283 ORTHO05D006673 1.0e-17 94.4 145 36.6
CiPaw.02G178500 Carya illinoinensis HOM05D000283 ORTHO05D006673 2.9e-17 92.8 158 36.7
Manes.10G039300 Manihot esculenta HOM05D000283 ORTHO05D006673 2.9e-17 92.8 138 42.8
SalBow6G2235 Salvia bowleyana HOM05D000283 ORTHO05D006673 6.5e-17 91.7 146 38.4
MSTRG.8954 Avicennia marina HOM05D000283 ORTHO05D006673 8.5e-17 91.3 141 42.6
Aqoxy2G01934 Aquilegia oxysepala HOM05D000283 ORTHO05D006673 1.4e-16 90.5 137 40.9
Medtr1g115950 Medicago truncatula HOM05D000283 ORTHO05D006673 3.2e-16 89.4 145 40.7
Lalb_Chr02g0143831 Lupinus albus HOM05D000283 ORTHO05D006673 4.2e-16 89.0 146 41.1
TAR636G0162 Trochodendron aralioides HOM05D000283 ORTHO05D006673 9.4e-16 87.8 128 39.8
Gorai.012G066900 Gossypium raimondii HOM05D000283 ORTHO05D006673 1.2e-15 87.4 137 38.0
Manes.10G039200 Manihot esculenta HOM05D000283 ORTHO05D006673 1.2e-15 87.4 138 42.8
Lalb_Chr02g0143851 Lupinus albus HOM05D000283 ORTHO05D006673 2.7e-15 86.3 152 40.8
Glyma.20G242400 Glycine max HOM05D000283 ORTHO05D006673 3.6e-15 85.9 150 40.7
Gohir.D04G060201 Gossypium hirsutum HOM05D000283 ORTHO05D006673 3.6e-15 85.9 137 37.2
Glyma.10G292400 Glycine max HOM05D000283 ORTHO05D006673 4.7e-15 85.5 150 40.7
Thecc.10G063100 Theobroma cacao HOM05D000283 ORTHO05D006673 4.7e-15 85.5 137 38.0
VMungo0720G0439 Vigna mungo HOM05D000283 ORTHO05D006673 4.7e-15 85.5 150 40.0
Ciclev10033332m.g Citrus clementina HOM05D000283 ORTHO05D006673 6.1e-15 85.1 134 38.1
Gohir.A05G352800 Gossypium hirsutum HOM05D000283 ORTHO05D006673 6.1e-15 85.1 137 37.2
QL08p057512 Quercus lobata HOM05D000283 ORTHO05D006673 6.1e-15 85.1 140 37.9
CiPaw.01G279600 Carya illinoinensis HOM05D000283 ORTHO05D006673 1.4e-14 84.0 145 35.9
Phvul.007G007900 Phaseolus vulgaris HOM05D000283 ORTHO05D006673 5.1e-14 82.0 150 38.7
TWI38G0559 Tripterygium wilfordii HOM05D000283 ORTHO05D006673 2.6e-13 79.7 138 35.5
Lj8A92T85 Lonicera japonica HOM05D000283 ORTHO05D006673 3.3e-13 79.3 139 39.6
Duzib114G0075 Durio zibethinus HOM05D000283 ORTHO05D006673 7.4e-13 78.2 137 38.0
Nn2g11490 Nelumbo nucifera HOM05D000283 ORTHO05D006673 1.3e-12 77.4 139 37.4
Hma1.2p1_0348F.1_g131680 Hydrangea macrophylla HOM05D000283 ORTHO05D006673 1.7e-12 77.0 141 36.2
Sabra10G0165500 Salix brachista HOM05D000283 ORTHO05D006673 1.7e-12 77.0 138 37.7
COL.COLO4_29238 Corchorus olitorius HOM05D000283 ORTHO05D006673 4.8e-12 75.5 135 36.3
TAR633G0056 Trochodendron aralioides HOM05D000283 ORTHO05D006673 2.4e-11 73.2 140 34.3
Eucgr.G02778 Eucalyptus grandis HOM05D000283 ORTHO05D006673 4.1e-11 72.4 131 35.9
PSO782G0271 Papaver somniferum HOM05D000283 ORTHO05D006673 9.1e-11 71.2 149 34.2
PSO478G2008 Papaver somniferum HOM05D000283 ORTHO05D006673 7.7e-10 68.2 145 35.9
RcHm_v2.0_Chr1g0365001 Rosa chinensis HOM05D000283 ORTHO05D006673 1.7e-09 67.0 140 37.9
Migut.F00680 Erythranthe guttata HOM05D000283 ORTHO05D006673 2.9e-09 66.2 146 34.9
THA.LOC104799366 Tarenaya hassleriana HOM05D000283 ORTHO05D006673 2.9e-09 66.2 140 37.1
Duzib106G1116 Durio zibethinus HOM05D000283 ORTHO05D006673 3.8e-09 65.9 135 37.0
CANSAT56G3782 Cannabis sativa HOM05D000283 ORTHO05D006673 3.2e-08 62.8 132 34.8
Rhsim09G0155800 Rhododendron simsii HOM05D000283 ORTHO05D006673 3.2e-08 62.8 129 37.2
CDE04G2023 Ceratophyllum demersum HOM05D000283 ORTHO05D006673 2.7e-07 59.7 135 31.1
FvH4_7g20760 Fragaria vesca HOM05D000283 ORTHO05D006673 2.3e-06 56.6 130 35.4
FAN10G3387 Fragaria x ananassa HOM05D000283 ORTHO05D005391 3.0e-06 56.2 130 35.4
CARHR199850 Cardamine hirsuta HOM05D010678 ORTHO05D006673 4.0e-06 55.8 151 30.5
Prupe.2G224500 Prunus persica HOM05D000283 ORTHO05D006673 5.2e-06 55.5 145 31.0
FAN06G2682 Fragaria x ananassa HOM05D000283 ORTHO05D006673 8.8e-06 54.7 130 34.6


User provided reference genes

Program Settings