Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G785.4 Capsicum annuum HOM05D000067 ORTHO05D001119 4.4e-103 378.3 231 100.0
Nitab4.5_0001119g0120 Nicotiana tabacum HOM05D001334 ORTHO05D001119 2.3e-27 126.7 136 58.1
CAN.G370.6 Capsicum annuum HOM05D001334 ORTHO05D001119 3.0e-27 126.3 139 63.3
PGSC0003DMG400024981 Solanum tuberosum HOM05D001334 ORTHO05D001119 8.1e-25 118.2 148 60.8
Peaxi162Scf00945g00121 Petunia axillaris HOM05D001334 ORTHO05D001119 1.7e-22 110.5 138 58.0
Solyc02g092870.2 Solanum lycopersicum HOM05D001334 ORTHO05D001119 1.1e-21 107.8 148 57.4
Nitab4.5_0001439g0020 Nicotiana tabacum HOM05D001334 ORTHO05D001119 4.2e-21 105.9 136 52.2
PGSC0003DMG400005598 Solanum tuberosum HOM05D000067 ORTHO05D000097 6.0e-20 102.1 98 59.2
CAN.G997.12 Capsicum annuum HOM05D000067 ORTHO05D000097 2.5e-18 96.7 165 39.4
Sopen02g037440 Solanum pennellii HOM05D001334 ORTHO05D001119 2.0e-15 87.0 148 51.4
CAN.G1044.1 Capsicum annuum HOM05D000067 ORTHO05D000097 7.6e-15 85.1 162 35.8
Nitab4.5_0000184g0190 Nicotiana tabacum HOM05D000067 ORTHO05D000097 1.7e-14 84.0 171 35.7
PGSC0003DMG400020965 Solanum tuberosum HOM05D000067 ORTHO05D000097 2.2e-14 83.6 142 40.1
CAN.G554.5 Capsicum annuum HOM05D001334 ORTHO05D001119 8.4e-14 81.6 88 59.1
Peaxi162Scf00023g00001 Petunia axillaris HOM05D000067 ORTHO05D000097 1.1e-13 81.3 167 33.5
Peaxi162Scf00075g00121 Petunia axillaris HOM05D000067 ORTHO05D000097 1.1e-13 81.3 167 33.5
Peaxi162Scf33779g00003 Petunia axillaris HOM05D000067 ORTHO05D000097 1.1e-13 81.3 167 33.5
Nitab4.5_0011321g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.5e-13 80.1 50 78.0
Nitab4.5_0011321g0020 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.5e-13 80.1 50 78.0
Solyc04g051620.3 Solanum lycopersicum HOM05D000067 ORTHO05D000097 3.2e-13 79.7 62 66.1
Sopen04g022990 Solanum pennellii HOM05D000067 ORTHO05D000097 5.5e-13 79.0 62 66.1
Sopen04g024210 Solanum pennellii HOM05D000067 ORTHO05D000097 4.6e-12 75.9 63 61.9
Solyc04g054380.1 Solanum lycopersicum HOM05D000067 ORTHO05D000097 6.0e-12 75.5 63 61.9
PGSC0003DMG400012790 Solanum tuberosum HOM05D000067 ORTHO05D000097 6.0e-12 75.5 179 33.0
CiPaw.12G125300 Carya illinoinensis HOM05D000067 ORTHO05D000097 1.5e-10 70.9 86 41.9
CiPaw.12G125000 Carya illinoinensis HOM05D000067 ORTHO05D000097 7.4e-10 68.6 86 40.7
Solyc01g101195.1 Solanum lycopersicum HOM05D000067 ORTHO05D000097 1.6e-09 67.4 61 49.2
Nitab4.5_0016435g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.2e-09 67.0 96 36.5
Dinv11658 Davidia involucrata HOM05D000067 ORTHO05D000097 1.4e-08 64.3 89 42.7
CSS0045743 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 3.1e-08 63.2 60 41.7
Dinv11660 Davidia involucrata HOM05D000067 ORTHO05D000097 3.1e-08 63.2 89 40.4
Nitab4.5_0000345g0080 Nicotiana tabacum HOM05D000067 ORTHO05D000097 5.3e-08 62.4 89 38.2
Peaxi162Scf00409g00121 Petunia axillaris HOM05D000067 ORTHO05D000097 5.3e-08 62.4 61 42.6
Nitab4.5_0000045g0380 Nicotiana tabacum HOM05D000067 ORTHO05D000097 6.9e-08 62.0 89 38.2
Dinv08216 Davidia involucrata HOM05D000067 ORTHO05D000097 1.2e-07 61.2 106 37.7
CSS0011201 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 1.5e-07 60.8 84 35.7
Migut.D01289 Erythranthe guttata HOM05D000067 ORTHO05D000097 1.5e-07 60.8 45 48.9
CiPaw.05G192400 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.0e-07 60.5 87 36.8
CiPaw.05G192600 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.0e-07 60.5 87 36.8
CSS0013109 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.6e-07 60.1 60 41.7
CSS0029064 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.6e-07 60.1 60 41.7
CSS0047556 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.6e-07 60.1 60 41.7
CiPaw.05G191800 Carya illinoinensis HOM05D000067 ORTHO05D000097 2.6e-07 60.1 87 36.8
Duzib213G0501 Durio zibethinus HOM05D000067 ORTHO05D000097 2.6e-07 60.1 81 38.3
Gohir.A11G280800 Gossypium hirsutum HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 41.0
Gohir.D11G291500 Gossypium hirsutum HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 41.0
Gorai.007G315500 Gossypium raimondii HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 41.0
Oeu052540.1 Olea europaea HOM05D000067 ORTHO05D000097 2.6e-07 60.1 49 55.1
Peaxi162Scf00071g00319 Petunia axillaris HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 44.3
Peaxi162Scf00409g00216 Petunia axillaris HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 41.0
Peaxi162Scf01658g00005 Petunia axillaris HOM05D000067 ORTHO05D000097 2.6e-07 60.1 61 44.3
Dinv16463 Davidia involucrata HOM05D000067 ORTHO05D000097 3.4e-07 59.7 76 42.1
Oeu052539.1 Olea europaea HOM05D000067 ORTHO05D000097 3.4e-07 59.7 85 38.8
SalBow4G2652 Salvia bowleyana HOM05D000067 ORTHO05D000097 3.4e-07 59.7 61 44.3
CiPaw.05G191900 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.5e-07 59.3 87 35.6
CiPaw.05G192000 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.5e-07 59.3 87 35.6
CiPaw.05G192100 Carya illinoinensis HOM05D000067 ORTHO05D000097 4.5e-07 59.3 87 35.6
Peaxi162Scf00357g00012 Petunia axillaris HOM05D000067 ORTHO05D000097 4.5e-07 59.3 89 34.8
SalBow4G0938 Salvia bowleyana HOM05D000067 ORTHO05D000097 4.5e-07 59.3 61 44.3
Atru.chr2.3609 Acer truncatum HOM05D000067 ORTHO05D000097 5.9e-07 58.9 51 49.0
CAN.G135.18 Capsicum annuum HOM05D000067 ORTHO05D000097 5.9e-07 58.9 84 38.1
QL11p016779 Quercus lobata HOM05D000067 ORTHO05D000097 5.9e-07 58.9 50 52.0
Solyc01g101210.4 Solanum lycopersicum HOM05D000067 ORTHO05D000097 5.9e-07 58.9 61 42.6
Sopen01g044650 Solanum pennellii HOM05D000067 ORTHO05D000097 5.9e-07 58.9 91 36.3
CAN.G459.15 Capsicum annuum HOM05D000067 ORTHO05D000097 7.7e-07 58.5 60 41.7
CiPaw.12G125200 Carya illinoinensis HOM05D000067 ORTHO05D000097 7.7e-07 58.5 50 50.0
Dinv08193 Davidia involucrata HOM05D000067 ORTHO05D000097 7.7e-07 58.5 83 39.8
Nitab4.5_0002185g0050 Nicotiana tabacum HOM05D000067 ORTHO05D000097 7.7e-07 58.5 54 46.3
Nitab4.5_0002717g0090 Nicotiana tabacum HOM05D000067 ORTHO05D000097 7.7e-07 58.5 65 41.5
Oeu022446.1 Olea europaea HOM05D000067 ORTHO05D000097 7.7e-07 58.5 85 36.5
Peaxi162Scf00193g00117 Petunia axillaris HOM05D000067 ORTHO05D000097 7.7e-07 58.5 89 34.8
Peaxi162Scf35876g00002 Petunia axillaris HOM05D000067 ORTHO05D000097 7.7e-07 58.5 89 34.8
QL11p016713 Quercus lobata HOM05D000067 ORTHO05D000097 7.7e-07 58.5 102 34.3
SalBow2G1907 Salvia bowleyana HOM05D000067 ORTHO05D000097 7.7e-07 58.5 49 53.1
SalBow2G2911 Salvia bowleyana HOM05D000067 ORTHO05D000097 7.7e-07 58.5 49 53.1
arahy.Tifrunner.gnm1.ann1.A2E6KE Arachis hypogaea HOM05D000067 ORTHO05D000097 1.0e-06 58.2 91 36.3
CiPaw.05G192500 Carya illinoinensis HOM05D000067 ORTHO05D000097 1.0e-06 58.2 66 42.4
Gohir.D11G291400 Gossypium hirsutum HOM05D000067 ORTHO05D000097 1.0e-06 58.2 61 39.3
Gohir.D11G291525 Gossypium hirsutum HOM05D000067 ORTHO05D000097 1.0e-06 58.2 86 34.9
Gorai.007G315600 Gossypium raimondii HOM05D000067 ORTHO05D000097 1.0e-06 58.2 86 34.9
Oeu017975.1 Olea europaea HOM05D000067 ORTHO05D000097 1.0e-06 58.2 77 39.0
Peaxi162Scf00003g00116 Petunia axillaris HOM05D000067 ORTHO05D000097 1.0e-06 58.2 89 36.0
Thecc.05G118800 Theobroma cacao HOM05D000067 ORTHO05D000097 1.0e-06 58.2 60 41.7
vmacro22060 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.0e-06 58.2 50 52.0
GSVIVG01036344001 Vitis vinifera HOM05D000067 ORTHO05D000097 1.0e-06 58.2 63 42.9
CAN.G1248.19 Capsicum annuum HOM05D000067 ORTHO05D000097 1.3e-06 57.8 84 35.7
CAN.G135.9 Capsicum annuum HOM05D000067 ORTHO05D000097 1.3e-06 57.8 72 37.5
Dinv16459 Davidia involucrata HOM05D000067 ORTHO05D000097 1.3e-06 57.8 76 40.8
Nitab4.5_0003188g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 1.3e-06 57.8 61 41.0
PGSC0003DMG400027337 Solanum tuberosum HOM05D000067 ORTHO05D000097 1.3e-06 57.8 92 33.7
vmacro19288 Vaccinium macrocarpon HOM05D000067 ORTHO05D000097 1.3e-06 57.8 86 38.4
CAN.G411.68 Capsicum annuum HOM05D000067 ORTHO05D000097 1.7e-06 57.4 51 47.1
Duzib268G0408 Durio zibethinus HOM05D000067 ORTHO05D000097 1.7e-06 57.4 84 35.7
Gohir.A11G285700 Gossypium hirsutum HOM05D000067 ORTHO05D000097 1.7e-06 57.4 66 36.4
Sopen02g021280 Solanum pennellii HOM05D000067 ORTHO05D000097 1.7e-06 57.4 52 46.2
PGSC0003DMG400018245 Solanum tuberosum HOM05D000067 ORTHO05D000097 1.7e-06 57.4 61 41.0
PGSC0003DMG400018284 Solanum tuberosum HOM05D000067 ORTHO05D000097 1.7e-06 57.4 61 41.0
arahy.Tifrunner.gnm1.ann1.CPL4PF Arachis hypogaea HOM05D000067 ORTHO05D000097 2.2e-06 57.0 87 33.3
Dinv40962 Davidia involucrata HOM05D000067 ORTHO05D000097 2.2e-06 57.0 66 43.9
Migut.N00345 Erythranthe guttata HOM05D000067 ORTHO05D000097 2.2e-06 57.0 77 40.3
Gohir.A11G250700 Gossypium hirsutum HOM05D000067 ORTHO05D000097 2.2e-06 57.0 69 37.7
Gohir.D11G291000 Gossypium hirsutum HOM05D000067 ORTHO05D000097 2.2e-06 57.0 77 33.8
Lsat_1_v5_gn_2_29221 Lactuca sativa HOM05D000067 ORTHO05D000097 2.2e-06 57.0 86 36.0
Nitab4.5_0005904g0070 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.2e-06 57.0 84 36.9
Nitab4.5_0011286g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.2e-06 57.0 81 37.0
SalBow2G0584 Salvia bowleyana HOM05D000067 ORTHO05D000097 2.2e-06 57.0 49 51.0
SalBow2G0859 Salvia bowleyana HOM05D000067 ORTHO05D000097 2.2e-06 57.0 49 51.0
CSS0028062 Camellia sinensis var. sinensis HOM05D000067 ORTHO05D000097 2.9e-06 56.6 50 46.0
Nitab4.5_0004794g0030 Nicotiana tabacum HOM05D000067 ORTHO05D000097 2.9e-06 56.6 64 37.5
SalBow6G0676 Salvia bowleyana HOM05D000067 ORTHO05D000097 2.9e-06 56.6 82 40.2
Solyc01g101170.4 Solanum lycopersicum HOM05D000067 ORTHO05D000097 2.9e-06 56.6 61 39.3
CAN.G135.22 Capsicum annuum HOM05D000067 ORTHO05D000097 3.8e-06 56.2 61 41.0
Dinv03960 Davidia involucrata HOM05D000067 ORTHO05D000097 3.8e-06 56.2 53 43.4
Dinv03962 Davidia involucrata HOM05D000067 ORTHO05D000097 3.8e-06 56.2 53 43.4
Gorai.007G315400 Gossypium raimondii HOM05D000067 ORTHO05D000097 3.8e-06 56.2 60 40.0
Sopen01g044660 Solanum pennellii HOM05D000067 ORTHO05D000097 3.8e-06 56.2 61 39.3
CAN.G459.13 Capsicum annuum HOM05D000067 ORTHO05D000097 5.0e-06 55.8 61 36.1
CiPaw.05G192700 Carya illinoinensis HOM05D000067 ORTHO05D000097 5.0e-06 55.8 79 35.4
Migut.N00346 Erythranthe guttata HOM05D000067 ORTHO05D000097 5.0e-06 55.8 77 40.3
Eucgr.E00419 Eucalyptus grandis HOM05D000067 ORTHO05D000097 5.0e-06 55.8 71 36.6
Nitab4.5_0001461g0050 Nicotiana tabacum HOM05D000067 ORTHO05D000097 5.0e-06 55.8 81 37.0
Nitab4.5_0004794g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 5.0e-06 55.8 81 37.0
Oeu052187.1 Olea europaea HOM05D000067 ORTHO05D000097 5.0e-06 55.8 48 50.0
CAN.G459.10 Capsicum annuum HOM05D000067 ORTHO05D000097 6.5e-06 55.5 59 35.6
Glyma.U032900 Glycine max HOM05D000067 ORTHO05D000097 6.5e-06 55.5 60 41.7
MBI17_g47359_MAGBIO Magnolia biondii HOM05D000067 ORTHO05D000097 6.5e-06 55.5 66 36.4
Nitab4.5_0002485g0030 Nicotiana tabacum HOM05D000067 ORTHO05D000097 6.5e-06 55.5 78 38.5
Oeu016009.1 Olea europaea HOM05D000067 ORTHO05D000097 6.5e-06 55.5 106 33.0
Oeu045774.1 Olea europaea HOM05D000067 ORTHO05D000097 6.5e-06 55.5 49 46.9
Peaxi162Scf00357g00011 Petunia axillaris HOM05D000067 ORTHO05D000097 6.5e-06 55.5 61 41.0
Peaxi162Scf03920g00004 Petunia axillaris HOM05D000067 ORTHO05D000097 6.5e-06 55.5 64 39.1
QL08p014349 Quercus lobata HOM05D000067 ORTHO05D000097 6.5e-06 55.5 56 42.9
QL11p017294 Quercus lobata HOM05D000067 ORTHO05D000097 6.5e-06 55.5 50 50.0
SGA_v2.0_scaffold45G17049 Striga asiatica HOM05D000067 ORTHO05D000097 6.5e-06 55.5 77 41.6
GSVIVG01036315001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.5e-06 55.5 63 41.3
GSVIVG01036351001 Vitis vinifera HOM05D000067 ORTHO05D000097 6.5e-06 55.5 63 41.3
arahy.Tifrunner.gnm1.ann1.M39DKM Arachis hypogaea HOM05D000067 ORTHO05D000097 8.5e-06 55.1 83 37.3
CAN.G135.7 Capsicum annuum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 61 36.1
CAN.G2357.1 Capsicum annuum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 61 36.1
CAN.G459.11 Capsicum annuum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 61 36.1
CAN.G459.14 Capsicum annuum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 61 36.1
Eucgr.B01942 Eucalyptus grandis HOM05D000067 ORTHO05D000097 8.5e-06 55.1 50 46.0
FvH4_3g21560 Fragaria vesca HOM05D000067 ORTHO05D000097 8.5e-06 55.1 76 36.8
FAN11G3925 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.5e-06 55.1 76 36.8
FAN16G0384 Fragaria x ananassa HOM05D000067 ORTHO05D000097 8.5e-06 55.1 76 36.8
Nitab4.5_0010662g0010 Nicotiana tabacum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 81 37.0
Oeu010928.1 Olea europaea HOM05D000067 ORTHO05D000097 8.5e-06 55.1 49 51.0
QL08p014364 Quercus lobata HOM05D000067 ORTHO05D000097 8.5e-06 55.1 56 41.1
Solyc01g101190.3 Solanum lycopersicum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 61 39.3
PGSC0003DMG400020680 Solanum tuberosum HOM05D000067 ORTHO05D000097 8.5e-06 55.1 55 41.8
GSVIVG01014557001 Vitis vinifera HOM05D000067 ORTHO05D000097 8.5e-06 55.1 81 33.3


User provided reference genes

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