Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G782.5 Capsicum annuum HOM05D006652 ORTHO05D008645 5.8e-214 747.3 376 100.0
Solyc10g008020.3 Solanum lycopersicum HOM05D006652 ORTHO05D008645 5.5e-188 661.0 382 86.9
Sopen10g003890 Solanum pennellii HOM05D006652 ORTHO05D008645 1.6e-187 659.4 380 87.1
Nitab4.5_0000822g0100 Nicotiana tabacum HOM05D006652 ORTHO05D008645 2.6e-182 642.1 377 85.4
Nitab4.5_0008146g0020 Nicotiana tabacum HOM05D006652 ORTHO05D008645 1.4e-178 629.8 376 84.8
Peaxi162Scf00241g00812 Petunia axillaris HOM05D006652 ORTHO05D008645 9.7e-177 623.6 377 83.8
PGSC0003DMG400010544 Solanum tuberosum HOM05D006652 ORTHO05D008645 5.3e-175 617.8 442 74.2
MSTRG.14312 Avicennia marina HOM05D006652 ORTHO05D008645 2.3e-154 549.3 331 80.4
Migut.H02157 Erythranthe guttata HOM05D006652 ORTHO05D008645 5.2e-154 548.1 328 82.3
Lj8C103T10 Lonicera japonica HOM05D006652 ORTHO05D008645 1.2e-153 547.0 374 73.8
vmacro09218 Vaccinium macrocarpon HOM05D006652 ORTHO05D008645 3.7e-152 542.0 323 80.2
GSVIVG01020686001 Vitis vinifera HOM05D006652 ORTHO05D008645 1.4e-151 540.0 344 76.5
Dinv08786 Davidia involucrata HOM05D006652 ORTHO05D008645 1.6e-150 536.6 371 72.8
Hma1.2p1_0166F.1_g073540 Hydrangea macrophylla HOM05D006652 ORTHO05D008645 1.6e-150 536.6 329 78.4
Lsat_1_v5_gn_8_140221 Lactuca sativa HOM05D006652 ORTHO05D008645 2.0e-150 536.2 323 79.6
HanXRQChr17g0558041 Helianthus annuus HOM05D006652 ORTHO05D008645 2.7e-150 535.8 356 73.3
QL08p041412 Quercus lobata HOM05D006652 ORTHO05D008645 5.9e-150 534.6 325 78.8
TAR629G0548 Trochodendron aralioides HOM05D006652 ORTHO05D008645 7.7e-150 534.3 330 77.6
SalBow7G3656 Salvia bowleyana HOM05D006652 ORTHO05D008645 1.3e-149 533.5 378 72.8
CSS0047332 Camellia sinensis var. sinensis HOM05D006652 ORTHO05D008645 2.3e-149 532.7 322 78.3
Sabra19G0103300 Salix brachista HOM05D006652 ORTHO05D008645 2.9e-149 532.3 346 76.3
Sabra19G0100100 Salix brachista HOM05D006652 ORTHO05D008645 1.5e-148 530.0 346 76.3
Potri.019G089700 Populus trichocarpa HOM05D006652 ORTHO05D008645 2.5e-148 529.3 346 75.7
Aqoxy4G00418 Aquilegia oxysepala HOM05D006652 ORTHO05D008645 7.2e-148 527.7 345 73.9
Atru.chr6.2810_Atru.chr6.2811 Acer truncatum HOM05D006652 ORTHO05D008645 9.5e-148 527.3 337 76.9
CiPaw.03G187000 Carya illinoinensis HOM05D006652 ORTHO05D008645 9.5e-148 527.3 356 72.8
arahy.Tifrunner.gnm1.ann1.KP1SVS Arachis hypogaea HOM05D006652 ORTHO05D008645 2.6e-145 519.2 333 75.1
Nn1g04382 Nelumbo nucifera HOM05D006652 ORTHO05D008645 3.4e-145 518.8 344 73.0
ECA234G1589 Erigeron canadensis HOM05D006652 ORTHO05D008645 7.5e-145 517.7 323 76.2
arahy.Tifrunner.gnm1.ann1.5ZDL5Q Arachis hypogaea HOM05D006652 ORTHO05D008645 3.7e-144 515.4 333 74.5
Medtr4g079750 Medicago truncatula HOM05D006652 ORTHO05D008645 4.9e-144 515.0 326 75.2
Lalb_Chr19g0134921 Lupinus albus HOM05D006652 ORTHO05D008645 8.3e-144 514.2 326 75.2
Eucgr.K01102 Eucalyptus grandis HOM05D006652 ORTHO05D008645 1.8e-143 513.1 348 71.6
unitig_21.g20276 Utricularia gibba HOM05D006652 ORTHO05D008645 3.2e-143 512.3 348 70.7
Lj3g0009013 Lotus japonicus HOM05D006652 ORTHO05D008645 7.0e-143 511.1 334 73.4
EL10Ac9g20915 Beta vulgaris HOM05D006652 ORTHO05D008645 1.6e-142 510.0 366 70.5
Ca_18890_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.0e-142 509.6 334 73.1
Ciclev10015734m.g Citrus clementina HOM05D006652 ORTHO05D008645 1.0e-141 507.3 342 73.7
Glyma.12G122700 Glycine max HOM05D006652 ORTHO05D008645 8.6e-141 504.2 334 72.2
Phvul.011G134400 Phaseolus vulgaris HOM05D006652 ORTHO05D008645 1.5e-140 503.4 334 70.7
AUR62038922 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.9e-140 503.1 326 73.9
Hund07829 Selenicereus undatus HOM05D006652 ORTHO05D008645 5.6e-140 501.5 320 75.6
Thecc.01G148700 Theobroma cacao HOM05D006652 ORTHO05D008645 7.3e-140 501.1 347 71.2
Gohir.A10G153800 Gossypium hirsutum HOM05D006652 ORTHO05D008645 2.8e-139 499.2 326 73.3
SGA_v2.0_scaffold109G31132 Striga asiatica HOM05D006652 ORTHO05D008645 2.8e-139 499.2 450 59.8
COL.COLO4_33547 Corchorus olitorius HOM05D006652 ORTHO05D008645 6.1e-139 498.0 322 74.2
Glyma.06G283400 Glycine max HOM05D006652 ORTHO05D008645 6.1e-139 498.0 334 70.7
Gohir.D10G112300 Gossypium hirsutum HOM05D006652 ORTHO05D008645 8.0e-139 497.7 326 73.0
Gorai.011G124200 Gossypium raimondii HOM05D006652 ORTHO05D008645 8.0e-139 497.7 326 73.0
ATR0661G163 Amborella trichopoda HOM05D006652 ORTHO05D008645 1.5e-137 493.4 329 71.4
Glyma.06G283600 Glycine max HOM05D006652 ORTHO05D008645 8.3e-136 487.6 334 69.5
Os10g0181600 Oryza sativa ssp. japonica HOM05D006652 ORTHO05D008645 8.3e-136 487.6 335 70.1
VMungo1127G0176 Vigna mungo HOM05D006652 ORTHO05D008645 1.1e-135 487.3 333 70.0
Zm00001eb223890 Zea mays HOM05D006652 ORTHO05D008645 7.0e-135 484.6 327 71.6
PGR142G2816 Punica granatum HOM05D006652 ORTHO05D008645 1.2e-134 483.8 331 69.8
Duzib187G0644 Durio zibethinus HOM05D006652 ORTHO05D008645 4.6e-134 481.9 331 70.7
CsaV3_6G018460 Cucumis sativus L. HOM05D006652 ORTHO05D008645 1.9e-132 476.5 331 69.8
Actinidia39342 Actinidia chinensis HOM05D006652 ORTHO05D008645 3.4e-129 465.7 279 80.6
MBI11_g14404_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 4.4e-129 465.3 373 65.4
Cc05_g08190 Coffea canephora HOM05D006652 ORTHO05D008645 7.5e-129 464.5 327 70.3
Cc05_g08160 Coffea canephora HOM05D006652 ORTHO05D008645 1.2e-126 457.2 303 73.3
Rhsim04G0074100 Rhododendron simsii HOM05D006652 ORTHO05D008645 7.3e-124 448.0 330 68.5
TWI59G0297 Tripterygium wilfordii HOM05D006652 ORTHO05D008645 4.0e-122 442.2 275 77.8
Psat7g166280 Pisum sativum HOM05D006652 ORTHO05D008645 1.1e-119 434.1 284 76.1
Manes.13G137800 Manihot esculenta HOM05D006652 ORTHO05D008645 6.6e-117 424.9 320 65.3
Pp3c3_7460 Physcomitrium patens HOM05D006652 ORTHO05D008645 1.2e-113 414.1 322 61.8
AUR62038997 Chenopodium quinoa HOM05D006652 ORTHO05D008645 9.9e-113 411.0 373 60.1
Sed0018596 Sechium edule HOM05D006652 ORTHO05D008645 3.2e-111 406.0 277 70.0
SMO334G0043 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 7.8e-110 401.4 325 59.7
CDE11G0921 Ceratophyllum demersum HOM05D006652 ORTHO05D008645 2.3e-109 399.8 267 71.2
Mapoly0061s0036 Marchantia polymorpha HOM05D006652 ORTHO05D008645 4.9e-104 382.1 327 56.0
Glyma.06G283500 Glycine max HOM05D006652 ORTHO05D008645 1.1e-103 380.9 290 64.1
DCAR_013062 Daucus carota HOM05D006652 ORTHO05D008645 6.9e-98 361.7 340 59.7
MBI11_g19676_MAGBIO Magnolia biondii HOM05D006652 ORTHO05D008645 1.5e-92 344.0 277 63.2
ClCG02G017930 Citrullus lanatus HOM05D006652 ORTHO05D008645 4.2e-87 325.9 329 55.3
Cc00_g35820 Coffea canephora HOM05D006652 ORTHO05D008645 2.3e-85 320.1 222 72.1
CBR_g20425 Chara braunii HOM05D006652 ORTHO05D008645 1.3e-80 304.3 351 45.3
PRCOL_00002204 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 7.4e-76 288.5 321 46.7
MCO11G400 Micromonas commoda HOM05D006652 ORTHO05D008645 1.3e-75 287.7 349 43.8
Zm00001eb307930 Zea mays HOM05D006652 ORTHO05D008645 1.1e-74 284.6 204 64.2
TPR.G21861 Trifolium pratense HOM05D006652 ORTHO05D008645 3.1e-74 283.1 196 69.9
AagrBONN_evm.TU.Sc2ySwM_228.444 Anthoceros agrestis HOM05D006652 ORTHO05D008645 5.9e-73 278.9 233 60.5
Ca_18889_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 3.2e-71 273.1 190 69.5
CBR_g20426 Chara braunii HOM05D006652 ORTHO05D008645 4.6e-70 269.2 395 40.0
MELO3C019759.2 Cucumis melo HOM05D006652 ORTHO05D008645 2.0e-68 263.8 185 68.6
PGR142G0648 Punica granatum HOM05D006652 ORTHO05D008645 3.3e-68 263.1 211 61.1
Zm00001eb202810 Zea mays HOM05D006652 ORTHO05D008645 1.2e-62 244.6 261 52.1
Zm00001eb155780 Zea mays HOM05D006652 ORTHO05D008645 3.6e-62 243.0 249 51.8
Mapoly0285s0004 Marchantia polymorpha HOM05D006652 ORTHO05D008645 2.6e-60 236.9 220 53.2
Cre03.g200350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 2.2e-59 233.8 351 38.5
Zm00001eb127120 Zea mays HOM05D006652 ORTHO05D008645 6.3e-59 232.3 252 49.6
Pp3c17_23540 Physcomitrium patens HOM05D006652 ORTHO05D008645 3.6e-54 216.5 305 38.4
SMO118G0546 Selaginella moellendorffii HOM05D006652 ORTHO05D008645 6.1e-54 215.7 305 38.4
Cre06.g259401 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D008645 1.8e-50 204.1 307 37.5
CBR_g34298 Chara braunii HOM05D006652 ORTHO05D008645 1.2e-49 201.4 317 39.7
Mapoly0050s0024 Marchantia polymorpha HOM05D006652 ORTHO05D008645 1.2e-49 201.4 370 33.8
Haze_13351 Corylus avellana HOM05D006652 ORTHO05D008645 2.7e-49 200.3 120 79.2
SEGI_35274 Sequoiadendron giganteum HOM05D006652 ORTHO05D008645 2.7e-49 200.3 328 36.3
arahy.Tifrunner.gnm1.ann1.MYHL2J Arachis hypogaea HOM05D006652 ORTHO05D008645 1.0e-45 188.3 141 65.2
Zm00001eb272210 Zea mays HOM05D006652 ORTHO05D008645 8.5e-40 168.7 203 46.8
Ca_18891_v3 Cicer arietinum L. HOM05D006652 ORTHO05D008645 2.5e-39 167.2 112 68.8
Haze_13350 Corylus avellana HOM05D006652 ORTHO05D008645 4.2e-39 166.4 93 81.7
MCO08G076 Micromonas commoda HOM05D006652 ORTHO05D008645 4.2e-39 166.4 324 31.2
PRCOL_00006996 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 1.2e-38 164.9 322 33.2
ECA234G0151 Erigeron canadensis HOM05D006652 ORTHO05D008645 2.6e-36 157.1 104 69.2
TPR.G21859 Trifolium pratense HOM05D006652 ORTHO05D008645 5.0e-32 142.9 138 52.2
AUR62024835 Chenopodium quinoa HOM05D006652 ORTHO05D008645 1.8e-29 134.4 141 51.1
AagrBONN_evm.TU.Sc2ySwM_117.2543 Anthoceros agrestis HOM05D006652 ORTHO05D008645 2.3e-29 134.0 174 42.5
TPR.G21704 Trifolium pratense HOM05D006652 ORTHO05D008645 1.2e-28 131.7 118 55.9
Cc05_g08180 Coffea canephora HOM05D006652 ORTHO05D008645 5.8e-20 102.8 56 89.3
Cc05_g08150 Coffea canephora HOM05D006652 ORTHO05D008645 2.9e-19 100.5 56 87.5
PRCOL_00001996 Prasinoderma coloniale HOM05D006652 ORTHO05D028803 4.1e-18 96.7 250 27.2
Glyma.12G122501 Glycine max HOM05D006652 ORTHO05D008645 7.0e-18 95.9 87 51.7
MCO09G339 Micromonas commoda HOM05D006652 ORTHO05D268879 7.3e-15 85.9 249 26.1
MCO15G420 Micromonas commoda HOM05D006652 ORTHO05D028803 4.7e-14 83.2 230 24.3
Cre06.g286350 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 2.3e-13 80.9 236 26.3
Ah.07g202300 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.4e-12 76.6 54 66.7
PRCOL_00002129 Prasinoderma coloniale HOM05D006652 ORTHO05D008645 5.8e-12 76.3 235 26.8
Cre06.g286300 Chlamydomonas reinhardtii HOM05D006652 ORTHO05D028803 2.9e-11 73.9 245 26.9
Ah.08g222620 Amaranthus hybridus HOM05D006652 ORTHO05D008645 4.1e-10 70.1 61 55.7
Haze_13352 Corylus avellana HOM05D006652 ORTHO05D008645 4.1e-10 70.1 43 67.4
Zm00001eb048070 Zea mays HOM05D001272 ORTHO05D001099 7.1e-10 69.3 153 34.0
CDE02G4569 Ceratophyllum demersum HOM05D005748 ORTHO05D007123 1.2e-06 58.5 169 30.8
Thecc.02G255300 Theobroma cacao HOM05D005748 ORTHO05D007123 4.7e-06 56.6 171 26.9


User provided reference genes

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