Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G781.29 Capsicum annuum HOM05D003549 ORTHO05D004223 5.0e-24 114.0 75 100.0
Nitab4.5_0000852g0140 Nicotiana tabacum HOM05D003549 ORTHO05D004223 9.4e-23 109.8 75 84.0
Nitab4.5_0003857g0060 Nicotiana tabacum HOM05D003549 ORTHO05D004223 9.4e-23 109.8 75 84.0
PGSC0003DMG400024492 Solanum tuberosum HOM05D003549 ORTHO05D004223 4.7e-22 107.5 75 84.0
Solyc03g114170.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 1.4e-21 105.9 75 82.7
Sopen03g033240 Solanum pennellii HOM05D003549 ORTHO05D004223 1.8e-21 105.5 75 82.7
Peaxi162Scf00017g02716 Petunia axillaris HOM05D003549 ORTHO05D004223 2.3e-21 105.1 75 82.7
Cc04_g12860 Coffea canephora HOM05D003549 ORTHO05D004223 1.1e-18 96.3 73 78.1
SalBow2G1727 Salvia bowleyana HOM05D003549 ORTHO05D004223 3.1e-18 94.7 75 69.3
Peaxi162Scf00689g00329 Petunia axillaris HOM05D003549 ORTHO05D004223 4.1e-18 94.4 75 86.7
Solyc06g071390.3 Solanum lycopersicum HOM05D003549 ORTHO05D004223 9.1e-18 93.2 75 78.7
Sopen06g027670 Solanum pennellii HOM05D003549 ORTHO05D004223 9.1e-18 93.2 75 78.7
CAN.G628.73 Capsicum annuum HOM05D003549 ORTHO05D004223 1.6e-17 92.4 75 78.7
PGSC0003DMG400027096 Solanum tuberosum HOM05D003549 ORTHO05D004223 2.0e-17 92.0 75 77.3
Thecc.03G009800 Theobroma cacao HOM05D003549 ORTHO05D004223 2.0e-17 92.0 75 80.0
CiPaw.11G028500 Carya illinoinensis HOM05D003549 ORTHO05D004223 3.5e-17 91.3 74 75.7
Lsat_1_v5_gn_4_74920 Lactuca sativa HOM05D003549 ORTHO05D004223 5.9e-17 90.5 76 75.0
SGA_v2.0_scaffold90G27958 Striga asiatica HOM05D000215 ORTHO05D003454 5.9e-17 90.5 75 64.0
Oeu000929.1 Olea europaea HOM05D003549 ORTHO05D004223 7.7e-17 90.1 73 76.7
Phvul.001G059000 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.0e-16 89.7 75 74.7
Duzib205G0517 Durio zibethinus HOM05D003549 ORTHO05D004223 1.7e-16 89.0 75 70.7
Migut.D01775 Erythranthe guttata HOM05D003549 ORTHO05D004223 2.2e-16 88.6 75 74.7
Glyma.06G183700 Glycine max HOM05D003549 ORTHO05D004223 2.2e-16 88.6 75 76.0
Lj6g0023924 Lotus japonicus HOM05D003549 ORTHO05D004223 2.2e-16 88.6 75 73.3
PSO478G4862 Papaver somniferum HOM05D003549 ORTHO05D004223 2.2e-16 88.6 75 72.0
RcHm_v2.0_Chr7g0193821 Rosa chinensis HOM05D003549 ORTHO05D004223 2.2e-16 88.6 74 71.6
FAN04G1549 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.9e-16 88.2 74 73.0
FAN08G2999 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.9e-16 88.2 74 73.0
FAN13G2761 Fragaria x ananassa HOM05D003549 ORTHO05D004223 2.9e-16 88.2 74 73.0
Glyma.04G181200 Glycine max HOM05D003549 ORTHO05D004223 2.9e-16 88.2 75 76.0
HanXRQChr16g0517241 Helianthus annuus HOM05D003549 ORTHO05D004223 2.9e-16 88.2 73 75.3
Dinv09155 Davidia involucrata HOM05D003549 ORTHO05D004223 3.8e-16 87.8 75 77.3
PSO017G2368 Papaver somniferum HOM05D003549 ORTHO05D004223 6.5e-16 87.0 75 70.7
Peaxi162Scf00535g00046 Petunia axillaris HOM05D003549 ORTHO05D004223 6.5e-16 87.0 75 68.0
TWI81G0050 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 6.5e-16 87.0 75 70.7
TWI81G1057 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 6.5e-16 87.0 75 70.7
RcHm_v2.0_Chr7g0184521 Rosa chinensis HOM05D003549 ORTHO05D004223 8.5e-16 86.7 74 70.3
Duzib084G0774 Durio zibethinus HOM05D003549 ORTHO05D004223 1.1e-15 86.3 75 70.7
Glyma.14G134200 Glycine max HOM05D003549 ORTHO05D004223 1.1e-15 86.3 75 73.3
FvH4_5g05150 Fragaria vesca HOM05D003549 ORTHO05D004223 1.5e-15 85.9 74 71.6
FAN18G4010 Fragaria x ananassa HOM05D003549 ORTHO05D004223 1.5e-15 85.9 74 71.6
Lj1g0007079 Lotus japonicus HOM05D003549 ORTHO05D004223 1.5e-15 85.9 75 73.3
Phvul.009G179900 Phaseolus vulgaris HOM05D003549 ORTHO05D004223 1.9e-15 85.5 75 72.0
Glyma.17G198800 Glycine max HOM05D003549 ORTHO05D004223 2.5e-15 85.1 71 73.2
Gohir.A07G060300 Gossypium hirsutum HOM05D003549 ORTHO05D004223 2.5e-15 85.1 72 72.2
CAN.G208.13 Capsicum annuum HOM05D003549 ORTHO05D004223 7.2e-15 83.6 43 97.7
CiPaw.12G025200 Carya illinoinensis HOM05D003549 ORTHO05D004223 9.4e-15 83.2 70 64.3
Ca_16195_v3 Cicer arietinum L. HOM05D003549 ORTHO05D004223 9.4e-15 83.2 75 69.3
ClCG01G013030 Citrullus lanatus HOM05D003549 ORTHO05D004223 9.4e-15 83.2 75 73.3
Haze_07495 Corylus avellana HOM05D003549 ORTHO05D004223 9.4e-15 83.2 71 71.8
CsaV3_1G008390 Cucumis sativus L. HOM05D003549 ORTHO05D004223 9.4e-15 83.2 75 73.3
Rhsim12G0163400 Rhododendron simsii HOM05D003549 ORTHO05D004223 9.4e-15 83.2 74 62.2
Nn8g39923 Nelumbo nucifera HOM05D003549 ORTHO05D004223 1.2e-14 82.8 75 66.7
Hund03159 Selenicereus undatus HOM05D003549 ORTHO05D004223 1.2e-14 82.8 74 68.9
GSVIVG01032498001 Vitis vinifera HOM05D003549 ORTHO05D004223 1.2e-14 82.8 72 69.4
Potri.001G334600 Populus trichocarpa HOM05D003549 ORTHO05D004223 2.1e-14 82.0 69 75.4
THA.LOC104805767 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.7e-14 81.6 70 74.3
Actinidia19094 Actinidia chinensis HOM05D003549 ORTHO05D004223 3.6e-14 81.3 75 72.0
QL02p076964 Quercus lobata HOM05D003549 ORTHO05D004223 4.7e-14 80.9 67 71.6
TAR629G2438 Trochodendron aralioides HOM05D003549 ORTHO05D004223 4.7e-14 80.9 75 61.3
MBI15_g31119_MAGBIO Magnolia biondii HOM05D003549 ORTHO05D004223 6.1e-14 80.5 73 74.0
Psat5g114160 Pisum sativum HOM05D003549 ORTHO05D004223 6.1e-14 80.5 75 69.3
PGR083G2145 Punica granatum HOM05D003549 ORTHO05D004223 6.1e-14 80.5 75 80.0
Lalb_Chr08g0236401 Lupinus albus HOM05D003549 ORTHO05D004223 8.0e-14 80.1 75 69.3
Prupe.5G175700 Prunus persica HOM05D003549 ORTHO05D004223 8.0e-14 80.1 73 72.6
TWI15G0885 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 8.0e-14 80.1 75 65.3
Gohir.D12G274100 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.0e-13 79.7 72 77.8
Gorai.008G294500 Gossypium raimondii HOM05D003549 ORTHO05D004223 1.0e-13 79.7 72 77.8
Aa31LG2G1940 Aethionema arabicum HOM05D003549 ORTHO05D004223 1.4e-13 79.3 71 70.4
CSS0022405 Camellia sinensis var. sinensis HOM05D003549 ORTHO05D004223 1.8e-13 79.0 75 72.0
Hma1.2p1_0176F.1_g077660 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 1.8e-13 79.0 75 72.0
MD06G1177000 Malus domestica HOM05D003549 ORTHO05D004223 2.3e-13 78.6 69 69.6
CAN.G650.26 Capsicum annuum HOM05D003549 ORTHO05D004223 3.0e-13 78.2 43 90.7
Potri.017G066900 Populus trichocarpa HOM05D003549 ORTHO05D004223 4.0e-13 77.8 75 70.7
Sopen12g011080 Solanum pennellii HOM05D003549 ORTHO05D004223 6.8e-13 77.0 43 88.4
TWI60G0590 Tripterygium wilfordii HOM05D003549 ORTHO05D004223 6.8e-13 77.0 71 62.0
unitig_749.g13471 Utricularia gibba HOM05D003549 ORTHO05D004223 6.8e-13 77.0 76 77.6
Aqoxy3G00995 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.2e-12 76.3 76 60.5
MD14G1183200 Malus domestica HOM05D003549 ORTHO05D004223 1.2e-12 76.3 69 69.6
Sed0001837 Sechium edule HOM05D003549 ORTHO05D004223 1.2e-12 76.3 75 61.3
THA.LOC109116495 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 1.2e-12 76.3 71 64.8
Actinidia33056 Actinidia chinensis HOM05D000215 ORTHO05D003454 1.5e-12 75.9 75 68.0
Sc12g0005420 Simmondsia chinensis HOM05D003549 ORTHO05D004223 1.5e-12 75.9 73 75.3
ECA232G0606 Erigeron canadensis HOM05D003549 ORTHO05D004223 2.0e-12 75.5 78 64.1
THA.LOC104823782 Tarenaya hassleriana HOM05D003549 ORTHO05D004223 2.0e-12 75.5 76 72.4
AUR62036487 Chenopodium quinoa HOM05D003549 ORTHO05D004223 4.4e-12 74.3 76 75.0
Actinidia04982 Actinidia chinensis HOM05D000215 ORTHO05D003454 5.7e-12 73.9 71 67.6
FAN02G2804 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.7e-12 73.9 67 71.6
FAN05G0330 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.7e-12 73.9 67 71.6
FAN09G2996 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.7e-12 73.9 67 71.6
FAN09G4496 Fragaria x ananassa HOM05D003549 ORTHO05D004223 5.7e-12 73.9 67 71.6
PSO063G4497 Papaver somniferum HOM05D003549 ORTHO05D004223 5.7e-12 73.9 75 58.7
PSO832G2372 Papaver somniferum HOM05D003549 ORTHO05D004223 5.7e-12 73.9 75 61.3
Ciclev10023184m.g Citrus clementina HOM05D003549 ORTHO05D004223 7.5e-12 73.6 71 66.2
Nn2g12408 Nelumbo nucifera HOM05D003549 ORTHO05D004223 7.5e-12 73.6 74 70.3
TAR622G0024 Trochodendron aralioides HOM05D003549 ORTHO05D004223 7.5e-12 73.6 75 66.7
TAR622G1417 Trochodendron aralioides HOM05D003549 ORTHO05D004223 7.5e-12 73.6 75 66.7
TAR371G0468 Trochodendron aralioides HOM05D003549 ORTHO05D004223 9.7e-12 73.2 75 69.3
BcaB03g15337 Brassica carinata HOM05D003549 ORTHO05D004223 1.3e-11 72.8 75 64.0
Sc04g0001880 Simmondsia chinensis HOM05D003549 ORTHO05D004223 1.3e-11 72.8 77 67.5
Ciclev10017382m.g Citrus clementina HOM05D003549 ORTHO05D004223 1.7e-11 72.4 71 67.6
Medtr3g078130 Medicago truncatula HOM05D003549 ORTHO05D004223 1.7e-11 72.4 75 65.3
Sed0023520 Sechium edule HOM05D003549 ORTHO05D004223 1.7e-11 72.4 75 69.3
arahy.Tifrunner.gnm1.ann1.G4GSC6 Arachis hypogaea HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 68.0
arahy.Tifrunner.gnm1.ann1.TT1NYY Arachis hypogaea HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 68.0
ClCG08G009420 Citrullus lanatus HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 68.0
MELO3C026538.2 Cucumis melo HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 68.0
CsaV3_6G031560 Cucumis sativus L. HOM05D003549 ORTHO05D004223 2.8e-11 71.6 75 68.0
SalBow5G5409 Salvia bowleyana HOM05D003549 ORTHO05D004223 2.8e-11 71.6 73 61.6
TPR.G37556 Trifolium pratense HOM05D003549 ORTHO05D004223 2.8e-11 71.6 71 74.6
AUR62037088 Chenopodium quinoa HOM05D003549 ORTHO05D004223 3.7e-11 71.2 76 73.7
COL.COLO4_34052 Corchorus olitorius HOM05D003549 ORTHO05D004223 6.3e-11 70.5 75 68.0
Duzib068G0952 Durio zibethinus HOM05D003549 ORTHO05D004223 6.3e-11 70.5 81 64.2
ECA246G5096 Erigeron canadensis HOM05D003549 ORTHO05D004223 6.3e-11 70.5 75 70.7
AUR62008230 Chenopodium quinoa HOM05D003549 ORTHO05D004223 8.3e-11 70.1 76 72.4
FvH4_6g50520 Fragaria vesca HOM05D003549 ORTHO05D004223 8.3e-11 70.1 67 68.7
FAN14G1319 Fragaria x ananassa HOM05D003549 ORTHO05D004223 8.3e-11 70.1 67 68.7
TPR.G30392 Trifolium pratense HOM05D003549 ORTHO05D004223 8.3e-11 70.1 83 63.9
Os01g0273000 Oryza sativa ssp. japonica HOM05D003549 ORTHO05D004223 1.1e-10 69.7 75 64.0
Prupe.3G282400 Prunus persica HOM05D003549 ORTHO05D004223 1.1e-10 69.7 69 66.7
Zm00001eb332940 Zea mays HOM05D003549 ORTHO05D004223 1.1e-10 69.7 74 58.1
unitig_26.g9627 Utricularia gibba HOM05D000915 ORTHO05D001662 1.4e-10 69.3 73 63.0
EL10Ac5g10777 Beta vulgaris HOM05D003549 ORTHO05D004223 1.8e-10 68.9 74 70.3
Dinv33505 Davidia involucrata HOM05D003549 ORTHO05D004223 1.8e-10 68.9 72 54.2
Manes.14G067300 Manihot esculenta HOM05D003549 ORTHO05D004223 1.8e-10 68.9 77 67.5
RcHm_v2.0_Chr2g0170951 Rosa chinensis HOM05D003549 ORTHO05D004223 1.8e-10 68.9 67 67.2
DCAR_021678 Daucus carota HOM05D003549 ORTHO05D004223 2.4e-10 68.6 69 66.7
Lalb_Chr11g0071151 Lupinus albus HOM05D003549 ORTHO05D004223 4.1e-10 67.8 71 73.2
Sp5g19250 Schrenkiella parvula HOM05D003549 ORTHO05D004223 4.1e-10 67.8 71 64.8
A07p32720 Brassica napus HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 64.4
C06p38930 Brassica napus HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 64.4
BolC6t38985H Brassica oleracea HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 64.4
BraA07t30898Z Brassica rapa HOM05D003549 ORTHO05D004223 7.0e-10 67.0 73 64.4
Manes.06G103400 Manihot esculenta HOM05D003549 ORTHO05D004223 7.0e-10 67.0 43 83.7
AL2G18990 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 9.1e-10 66.6 75 65.3
CARHR049490 Cardamine hirsuta HOM05D003549 ORTHO05D004223 9.1e-10 66.6 70 65.7
Ah.13g075720 Amaranthus hybridus HOM05D003549 ORTHO05D004223 1.2e-09 66.2 77 72.7
Aqoxy3G02997 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 1.2e-09 66.2 70 70.0
Gohir.A12G273400 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.2e-09 66.2 76 69.7
HanXRQChr02g0037231 Helianthus annuus HOM05D003549 ORTHO05D004223 1.6e-09 65.9 73 71.2
Lsat_1_v5_gn_1_26640 Lactuca sativa HOM05D000122 ORTHO05D004223 3.5e-09 64.7 72 68.1
Rhsim08G0170600 Rhododendron simsii HOM05D003549 ORTHO05D004223 3.5e-09 64.7 76 57.9
BcaB05g23601 Brassica carinata HOM05D003549 ORTHO05D004223 4.5e-09 64.3 75 56.0
HPP92_002194 Vanilla planifolia HOM05D003549 ORTHO05D004223 5.9e-09 63.9 73 58.9
Hma1.2p1_0802F.1_g220520 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 7.7e-09 63.5 68 50.0
Thhalv10022469m.g Eutrema salsugineum HOM05D003549 ORTHO05D004223 1.3e-08 62.8 71 60.6
Cpa.g.sc124.38 Carica papaya HOM05D003549 ORTHO05D004223 1.7e-08 62.4 74 63.5
Atru.chr9.2446 Acer truncatum HOM05D003549 ORTHO05D004223 5.0e-08 60.8 42 76.2
AL8G14410 Arabidopsis lyrata HOM05D003549 ORTHO05D004223 5.0e-08 60.8 71 63.4
Cpa.g.sc1914.1 Carica papaya HOM05D003549 ORTHO05D004223 5.0e-08 60.8 40 72.5
Aqoxy3G00999 Aquilegia oxysepala HOM05D003549 ORTHO05D004223 8.5e-08 60.1 75 58.7
Hund12012 Selenicereus undatus HOM05D003549 ORTHO05D004223 8.5e-08 60.1 75 65.3
Eucgr.K02857 Eucalyptus grandis HOM05D003549 ORTHO05D004223 1.5e-07 59.3 65 67.7
Gohir.D07G065000 Gossypium hirsutum HOM05D003549 ORTHO05D004223 1.9e-07 58.9 43 72.1
Gorai.001G068500 Gossypium raimondii HOM05D003549 ORTHO05D004223 1.9e-07 58.9 43 72.1
ATR0752G058 Amborella trichopoda HOM05D003549 ORTHO05D004223 3.2e-07 58.2 80 66.2
CANSAT64G1109 Cannabis sativa HOM05D003549 ORTHO05D004223 4.2e-07 57.8 72 59.7
DCAR_021565 Daucus carota HOM05D003549 ORTHO05D004223 4.2e-07 57.8 73 57.5
Mapoly0025s0126 Marchantia polymorpha HOM05D003549 ORTHO05D004223 4.2e-07 57.8 66 53.0
ECA247G2394 Erigeron canadensis HOM05D003549 ORTHO05D004223 5.5e-07 57.4 76 57.9
Carub.0003s3029 Capsella rubella HOM05D003549 ORTHO05D004223 1.2e-06 56.2 76 59.2
SMO139G0002 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 1.2e-06 56.2 72 55.6
BolC2t09796H Brassica oleracea HOM05D003549 ORTHO05D004223 1.6e-06 55.8 76 53.9
A02p23950 Brassica napus HOM05D003549 ORTHO05D004223 2.1e-06 55.5 76 63.2
Hma1.2p1_0967F.1_g242260 Hydrangea macrophylla HOM05D003549 ORTHO05D004223 3.6e-06 54.7 80 42.5
SMO145G0027 Selaginella moellendorffii HOM05D003549 ORTHO05D004223 3.6e-06 54.7 72 54.2
C02p37800 Brassica napus HOM05D003549 ORTHO05D004223 6.1e-06 53.9 76 61.8
Cfa019097 Carpinus fangiana HOM05D003549 ORTHO05D004223 6.1e-06 53.9 122 43.4
CBR_g8660 Chara braunii HOM05D003549 ORTHO05D004223 6.1e-06 53.9 71 50.7
CDE10G0156 Ceratophyllum demersum HOM05D003549 ORTHO05D004223 8.0e-06 53.5 75 53.3


User provided reference genes

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