Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G781.28 Capsicum annuum HOM05D000090 ORTHO05D010509 7.8e-25 116.3 58 100.0
Nitab4.5_0003857g0020 Nicotiana tabacum HOM05D000090 ORTHO05D000083 4.7e-14 80.5 49 83.7
PGSC0003DMG400024593 Solanum tuberosum HOM05D000090 ORTHO05D000083 6.2e-14 80.1 46 89.1
PGSC0003DMG400024594 Solanum tuberosum HOM05D000090 ORTHO05D000083 1.4e-13 79.0 46 87.0
Solyc03g114175.1 Solanum lycopersicum HOM05D000090 ORTHO05D000083 2.6e-12 74.7 46 84.8
Sopen03g033250 Solanum pennellii HOM05D000090 ORTHO05D000083 5.8e-12 73.6 46 82.6
Nitab4.5_0000852g0130 Nicotiana tabacum HOM05D000090 ORTHO05D000083 1.3e-11 72.4 49 77.6
Peaxi162Scf00017g02718 Petunia axillaris HOM05D000090 ORTHO05D000083 4.1e-10 67.4 49 71.4
Peaxi162Scf00017g02717 Petunia axillaris HOM05D000090 ORTHO05D000083 9.2e-10 66.2 49 69.4
CSS0000806 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D000083 2.3e-08 61.6 45 71.1
Rhsim08G0056000 Rhododendron simsii HOM05D000090 ORTHO05D000083 2.3e-08 61.6 45 71.1
CiPaw.03G036800 Carya illinoinensis HOM05D000090 ORTHO05D000083 3.0e-08 61.2 43 72.1
Rhsim08G0056100 Rhododendron simsii HOM05D000090 ORTHO05D000083 5.1e-08 60.5 47 66.0
Lsat_1_v5_gn_2_92400 Lactuca sativa HOM05D000090 ORTHO05D000083 6.6e-08 60.1 45 66.7
TAR629G1755 Trochodendron aralioides HOM05D000090 ORTHO05D000083 6.6e-08 60.1 45 68.9
vmacro18235 Vaccinium macrocarpon HOM05D000090 ORTHO05D000083 8.6e-08 59.7 45 66.7
Hma1.2p1_0697F.1_g204760 Hydrangea macrophylla HOM05D000090 ORTHO05D000083 1.1e-07 59.3 45 68.9
RhsimUnG0224200 Rhododendron simsii HOM05D000090 ORTHO05D000083 1.1e-07 59.3 47 63.8
vmacro18236 Vaccinium macrocarpon HOM05D000090 ORTHO05D000083 1.9e-07 58.5 45 66.7
Lsat_1_v5_gn_2_92340 Lactuca sativa HOM05D000090 ORTHO05D000083 2.5e-07 58.2 45 66.7
Oeu004700.1 Olea europaea HOM05D000090 ORTHO05D000083 2.5e-07 58.2 44 68.2
MD17G1036700 Malus domestica HOM05D000090 ORTHO05D000083 3.3e-07 57.8 45 64.4
Prupe.3G282700 Prunus persica HOM05D000090 ORTHO05D000083 3.3e-07 57.8 45 66.7
Actinidia35738 Actinidia chinensis HOM05D000090 ORTHO05D000083 4.3e-07 57.4 45 64.4
Dinv33504 Davidia involucrata HOM05D000090 ORTHO05D000083 4.3e-07 57.4 52 55.8
TAR371G0600 Trochodendron aralioides HOM05D000090 ORTHO05D000083 4.3e-07 57.4 45 66.7
MD17G1035900 Malus domestica HOM05D000090 ORTHO05D000083 5.6e-07 57.0 45 64.4
TAR371G0216 Trochodendron aralioides HOM05D000090 ORTHO05D000083 5.6e-07 57.0 45 66.7
Lj7P590T31 Lonicera japonica HOM05D000090 ORTHO05D000083 7.3e-07 56.6 44 68.2
Aqoxy3G00993 Aquilegia oxysepala HOM05D000090 ORTHO05D000083 9.5e-07 56.2 45 66.7
Cc07_g02370 Coffea canephora HOM05D000090 ORTHO05D000083 9.5e-07 56.2 43 65.1
MD17G1036200 Malus domestica HOM05D000090 ORTHO05D000083 9.5e-07 56.2 45 62.2
QL02p076858 Quercus lobata HOM05D000090 ORTHO05D000083 9.5e-07 56.2 54 59.3
TAR371G0375 Trochodendron aralioides HOM05D000090 ORTHO05D010509 9.5e-07 56.2 55 58.2
TAR371G0656 Trochodendron aralioides HOM05D000090 ORTHO05D000083 9.5e-07 56.2 45 66.7
CSS0003012 Camellia sinensis var. sinensis HOM05D000090 ORTHO05D000083 1.2e-06 55.8 44 68.2
AUR62025164 Chenopodium quinoa HOM05D000090 ORTHO05D000083 1.2e-06 55.8 45 62.2
QL02p076898 Quercus lobata HOM05D000090 ORTHO05D000083 1.6e-06 55.5 45 68.9
TAR629G2243 Trochodendron aralioides HOM05D000090 ORTHO05D000083 1.6e-06 55.5 45 64.4
TAR629G2353 Trochodendron aralioides HOM05D000100 ORTHO05D010509 1.6e-06 55.5 45 64.4
Oeu062988.1 Olea europaea HOM05D000090 ORTHO05D000083 2.1e-06 55.1 46 63.0
QL02p076946 Quercus lobata HOM05D000090 ORTHO05D000083 2.1e-06 55.1 51 60.8
Rhsim08G0056300 Rhododendron simsii HOM05D000090 ORTHO05D000083 2.1e-06 55.1 45 62.2
RhsimUnG0224100 Rhododendron simsii HOM05D000090 ORTHO05D000083 2.1e-06 55.1 45 62.2
FvH4_6g50530 Fragaria vesca HOM05D000090 ORTHO05D000083 2.8e-06 54.7 46 63.0
FAN02G4179 Fragaria x ananassa HOM05D000090 ORTHO05D000083 2.8e-06 54.7 46 63.0
FAN09G4625 Fragaria x ananassa HOM05D000090 ORTHO05D000083 2.8e-06 54.7 46 63.0
Lsat_1_v5_gn_2_49081 Lactuca sativa HOM05D000090 ORTHO05D000083 3.6e-06 54.3 45 60.0
Lj7P590T46 Lonicera japonica HOM05D000090 ORTHO05D000083 3.6e-06 54.3 45 66.7
TAR629G0437 Trochodendron aralioides HOM05D000090 ORTHO05D000083 4.7e-06 53.9 44 68.2
AUR62038392 Chenopodium quinoa HOM05D000090 ORTHO05D000083 6.2e-06 53.5 45 60.0
HanXRQChr12g0385481 Helianthus annuus HOM05D000090 ORTHO05D000083 6.2e-06 53.5 45 60.0
HanXRQChr12g0385491 Helianthus annuus HOM05D000090 ORTHO05D000083 6.2e-06 53.5 45 60.0
HanXRQChr12g0385501 Helianthus annuus HOM05D000090 ORTHO05D000083 6.2e-06 53.5 45 60.0
PGSC0003DMG400006949 Solanum tuberosum HOM05D000090 ORTHO05D000083 6.2e-06 53.5 44 63.6
Cc04_g12890 Coffea canephora HOM05D000090 ORTHO05D000083 8.1e-06 53.1 44 63.6
FAN14G3800 Fragaria x ananassa HOM05D000090 ORTHO05D000083 8.1e-06 53.1 46 60.9
Lju41C34T5 Lonicera japonica HOM05D000090 ORTHO05D000083 8.1e-06 53.1 44 61.4
RcHm_v2.0_Chr2g0171031 Rosa chinensis HOM05D000090 ORTHO05D000083 8.1e-06 53.1 45 62.2


User provided reference genes

Program Settings