Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G776.1 Capsicum annuum HOM05D003089 ORTHO05D003544 1.1e-86 323.2 158 100.0
Nitab4.5_0000336g0120 Nicotiana tabacum HOM05D003089 ORTHO05D003544 1.4e-07 60.5 72 51.4
Nitab4.5_0000736g0060 Nicotiana tabacum HOM05D003089 ORTHO05D003544 1.4e-07 60.5 72 51.4
Solyc11g043130.2 Solanum lycopersicum HOM05D003089 ORTHO05D003544 1.4e-07 60.5 72 51.4
Sopen11g019550 Solanum pennellii HOM05D003089 ORTHO05D003544 1.4e-07 60.5 72 51.4
Peaxi162Scf00684g00421 Petunia axillaris HOM05D003089 ORTHO05D003544 1.8e-07 60.1 72 50.0
FAN24G1972 Fragaria x ananassa HOM05D003089 ORTHO05D003544 3.1e-07 59.3 68 52.9
FAN24G2674 Fragaria x ananassa HOM05D003089 ORTHO05D003544 3.1e-07 59.3 68 52.9
Lsat_1_v5_gn_9_109381 Lactuca sativa HOM05D003089 ORTHO05D003544 3.1e-07 59.3 117 38.5
Ciclev10027664m.g Citrus clementina HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
Duzib132G0336 Durio zibethinus HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
FvH4_2g08470 Fragaria vesca HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
FAN15G0570 Fragaria x ananassa HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
Nn3g17070 Nelumbo nucifera HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
QL11p043039 Quercus lobata HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
RcHm_v2.0_Chr6g0263811 Rosa chinensis HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
Thecc.02G123600 Theobroma cacao HOM05D003089 ORTHO05D003544 4.0e-07 58.9 68 52.9
Haze_02363 Corylus avellana HOM05D003089 ORTHO05D003544 5.2e-07 58.5 68 52.9
Duzib052G1069 Durio zibethinus HOM05D003089 ORTHO05D003544 5.2e-07 58.5 68 51.5
HanXRQChr10g0307291 Helianthus annuus HOM05D003089 ORTHO05D003544 5.2e-07 58.5 72 50.0
Migut.B00253 Erythranthe guttata HOM05D003089 ORTHO05D003544 6.8e-07 58.2 81 46.9
CANSAT25G2870 Cannabis sativa HOM05D003089 ORTHO05D003544 8.9e-07 57.8 68 51.5
GSVIVG01031931001 Vitis vinifera HOM05D003089 ORTHO05D003544 8.9e-07 57.8 68 51.5
COL.COLO4_32443 Corchorus olitorius HOM05D003089 ORTHO05D003544 1.2e-06 57.4 68 51.5
FAN27G3350 Fragaria x ananassa HOM05D003089 ORTHO05D003544 1.2e-06 57.4 68 51.5
PSO161G0089 Papaver somniferum HOM05D003089 ORTHO05D003544 1.2e-06 57.4 68 51.5
Prupe.8G100100 Prunus persica HOM05D003089 ORTHO05D003544 1.2e-06 57.4 81 45.7
ECA240G3266 Erigeron canadensis HOM05D003829 ORTHO05D003544 1.5e-06 57.0 68 51.5
Lsat_1_v5_gn_5_118040 Lactuca sativa HOM05D003089 ORTHO05D003544 1.5e-06 57.0 72 48.6
Cc02_g17780 Coffea canephora HOM05D003089 ORTHO05D003544 2.0e-06 56.6 68 50.0
HanXRQChr08g0216591 Helianthus annuus HOM05D003089 ORTHO05D003544 2.0e-06 56.6 68 50.0
MBI03_g27663_MAGBIO Magnolia biondii HOM05D003089 ORTHO05D003544 2.0e-06 56.6 68 51.5
Nn1g03865 Nelumbo nucifera HOM05D003089 ORTHO05D003544 2.0e-06 56.6 68 48.5
Atru.chr5.2984 Acer truncatum HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 51.5
CiPaw.06G137000 Carya illinoinensis HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 50.0
Dinv42085 Davidia involucrata HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 48.5
Gorai.005G228400 Gossypium raimondii HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 48.5
Lj9C368G4 Lonicera japonica HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 50.0
PGR042G2422 Punica granatum HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 51.5
SalBow6G2407 Salvia bowleyana HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 50.0
SalBow6G4859 Salvia bowleyana HOM05D003089 ORTHO05D003544 2.6e-06 56.2 68 50.0
CAN.G566.47 Capsicum annuum HOM05D003089 ORTHO05D003544 3.4e-06 55.8 72 48.6
DCAR_003639 Daucus carota HOM05D003089 ORTHO05D003544 3.4e-06 55.8 68 50.0
Gohir.D04G158700 Gossypium hirsutum HOM05D003089 ORTHO05D003544 3.4e-06 55.8 68 50.0
Gorai.012G146100 Gossypium raimondii HOM05D003089 ORTHO05D003544 3.4e-06 55.8 68 50.0
PSO478G0141 Papaver somniferum HOM05D003089 ORTHO05D003544 3.4e-06 55.8 68 50.0
Hund06224 Selenicereus undatus HOM05D003089 ORTHO05D003544 3.4e-06 55.8 68 50.0
MSTRG.20096 Avicennia marina HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 48.5
MELO3C012545.2 Cucumis melo HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 48.5
CsaV3_7G023410 Cucumis sativus L. HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 48.5
ECA234G4407 Erigeron canadensis HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 48.5
Rhsim11G0174300 Rhododendron simsii HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 51.5
Sed0019364 Sechium edule HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 48.5
vmacro02128 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 51.5
vmacro02129 Vaccinium macrocarpon HOM05D003089 ORTHO05D003544 4.4e-06 55.5 68 51.5
TWI75G1044 Tripterygium wilfordii HOM05D003089 ORTHO05D003544 5.8e-06 55.1 71 47.9
TAR622G0009 Trochodendron aralioides HOM05D003089 ORTHO05D003544 5.8e-06 55.1 68 50.0
Lj1g0018032 Lotus japonicus HOM05D003089 ORTHO05D003544 7.6e-06 54.7 68 50.0
MD05G1068200 Malus domestica HOM05D003089 ORTHO05D003544 7.6e-06 54.7 68 50.0
Oeu020770.2 Olea europaea HOM05D003089 ORTHO05D003544 7.6e-06 54.7 68 50.0
Sc18g0004600 Simmondsia chinensis HOM05D003089 ORTHO05D003544 7.6e-06 54.7 68 50.0
Gohir.A04G117000 Gossypium hirsutum HOM05D003089 ORTHO05D003544 9.9e-06 54.3 68 48.5
Gohir.D02G202895 Gossypium hirsutum HOM05D003089 ORTHO05D003544 9.9e-06 54.3 68 47.1
Hma1.2p1_0196F.1_g084730 Hydrangea macrophylla HOM05D003089 ORTHO05D003544 9.9e-06 54.3 68 48.5
Nitab4.5_0002814g0110 Nicotiana tabacum HOM05D003089 ORTHO05D003544 9.9e-06 54.3 68 50.0


User provided reference genes

Program Settings