Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G775.2 Capsicum annuum HOM05D001756 ORTHO05D001581 5.0e-55 217.6 117 100.0
PGSC0003DMG400021406 Solanum tuberosum HOM05D001756 ORTHO05D001581 2.0e-19 99.4 86 65.1
Sopen02g036700 Solanum pennellii HOM05D001756 ORTHO05D001581 5.8e-19 97.8 86 64.0
Peaxi162Scf00449g00418 Petunia axillaris HOM05D001756 ORTHO05D001581 7.5e-19 97.4 58 77.6
Solyc02g092110.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 7.5e-19 97.4 86 64.0
Nitab4.5_0000142g0340 Nicotiana tabacum HOM05D001756 ORTHO05D001581 1.3e-18 96.7 87 64.4
CAN.G1343.3 Capsicum annuum HOM05D001756 ORTHO05D001581 5.4e-17 91.3 67 70.1
Peaxi162Scf00548g00114 Petunia axillaris HOM05D001756 ORTHO05D001581 3.3e-14 82.0 86 60.5
Peaxi162Scf00548g00113 Petunia axillaris HOM05D001756 ORTHO05D001581 2.1e-13 79.3 67 71.6
Solyc02g092120.3 Solanum lycopersicum HOM05D001756 ORTHO05D001581 2.1e-13 79.3 87 54.0
CAN.G1343.2 Capsicum annuum HOM05D001756 ORTHO05D001581 6.2e-13 77.8 68 61.8
PGSC0003DMG400021407 Solanum tuberosum HOM05D001756 ORTHO05D001581 6.2e-13 77.8 90 54.4
Sopen02g036710 Solanum pennellii HOM05D001756 ORTHO05D001581 1.8e-12 76.3 87 52.9
GSVIVG01037055001 Vitis vinifera HOM05D001756 ORTHO05D001581 3.4e-11 72.0 67 56.7
Cc07_g07320 Coffea canephora HOM05D001756 ORTHO05D001581 9.9e-11 70.5 58 63.8
CiPaw.01G002400 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.9e-10 68.9 67 55.2
TWI59G0044 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 1.4e-09 66.6 67 47.8
Cfa004702 Carpinus fangiana HOM05D001756 ORTHO05D001581 2.4e-09 65.9 67 53.7
TAR628G0014 Trochodendron aralioides HOM05D001756 ORTHO05D001581 7.1e-09 64.3 67 53.7
CiPaw.05G020600 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.2e-08 63.5 67 49.3
Dinv09540 Davidia involucrata HOM05D001756 ORTHO05D001581 2.1e-08 62.8 67 53.7
Potri.014G006900 Populus trichocarpa HOM05D001756 ORTHO05D001581 2.1e-08 62.8 67 53.7
Rhsim08G0091500 Rhododendron simsii HOM05D001756 ORTHO05D001581 2.1e-08 62.8 67 55.2
Haze_10304 Corylus avellana HOM05D001756 ORTHO05D001581 2.7e-08 62.4 67 52.2
Manes.12G117100 Manihot esculenta HOM05D001756 ORTHO05D001581 2.7e-08 62.4 54 59.3
Sabra14G0006400 Salix brachista HOM05D001756 ORTHO05D001581 3.5e-08 62.0 68 54.4
TWI23G1082 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 3.5e-08 62.0 68 44.1
Gohir.D06G022100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 4.6e-08 61.6 67 50.7
Gorai.010G026700 Gossypium raimondii HOM05D001756 ORTHO05D001581 4.6e-08 61.6 67 50.7
Lj4A164T42 Lonicera japonica HOM05D001756 ORTHO05D001581 4.6e-08 61.6 68 55.9
Potri.007G006800 Populus trichocarpa HOM05D001756 ORTHO05D001581 4.6e-08 61.6 67 55.2
Gohir.A06G025000 Gossypium hirsutum HOM05D001756 ORTHO05D001581 6.0e-08 61.2 52 55.8
Sabra07G0005100 Salix brachista HOM05D001756 ORTHO05D001581 6.0e-08 61.2 67 55.2
CSS0039448 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 7.8e-08 60.8 58 53.4
Thecc.02G119700 Theobroma cacao HOM05D001756 ORTHO05D001581 7.8e-08 60.8 51 58.8
Dinv16070 Davidia involucrata HOM05D001756 ORTHO05D001581 1.0e-07 60.5 67 52.2
RhsimUnG0122800 Rhododendron simsii HOM05D001756 ORTHO05D001581 1.0e-07 60.5 67 53.7
RcHm_v2.0_Chr6g0309921 Rosa chinensis HOM05D001756 ORTHO05D001581 1.0e-07 60.5 64 48.4
QL11p029356 Quercus lobata HOM05D001756 ORTHO05D001581 1.7e-07 59.7 69 52.2
Thecc.08G085400 Theobroma cacao HOM05D001756 ORTHO05D001581 1.7e-07 59.7 67 49.3
vmacro01948 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 1.7e-07 59.7 57 52.6
CSS0040959 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 2.3e-07 59.3 58 53.4
CiPaw.06G164100 Carya illinoinensis HOM05D001756 ORTHO05D001581 2.3e-07 59.3 67 44.8
Ca_24672_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.3e-07 59.3 58 56.9
Ca_30012_v3 Cicer arietinum L. HOM05D001756 ORTHO05D001581 2.3e-07 59.3 58 56.9
PGR142G2395 Punica granatum HOM05D001756 ORTHO05D001581 2.3e-07 59.3 64 48.4
Dinv26955 Davidia involucrata HOM05D001756 ORTHO05D001581 3.0e-07 58.9 70 50.0
Eucgr.I00676 Eucalyptus grandis HOM05D001756 ORTHO05D001581 3.0e-07 58.9 67 49.3
FAN20G1648 Fragaria x ananassa HOM05D001756 ORTHO05D001581 3.0e-07 58.9 54 55.6
Glyma.11G046000 Glycine max HOM05D001756 ORTHO05D001581 3.0e-07 58.9 57 54.4
Manes.18G048700 Manihot esculenta HOM05D001756 ORTHO05D001581 3.0e-07 58.9 57 52.6
Phvul.007G047000 Phaseolus vulgaris HOM05D001756 ORTHO05D001581 3.0e-07 58.9 66 48.5
Rhsim08G0091400 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.0e-07 58.9 67 53.7
RhsimUnG0041200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.0e-07 58.9 59 54.2
RhsimUnG0123200 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.0e-07 58.9 59 54.2
Hma1.2p1_1051F.1_g252120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 3.9e-07 58.5 58 53.4
Rhsim10G0094800 Rhododendron simsii HOM05D001756 ORTHO05D001581 3.9e-07 58.5 54 59.3
RcHm_v2.0_Chr2g0108571 Rosa chinensis HOM05D001756 ORTHO05D001581 3.9e-07 58.5 63 49.2
CSS0000381 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 5.1e-07 58.2 58 51.7
Lsat_1_v5_gn_5_117161 Lactuca sativa HOM05D001756 ORTHO05D001581 5.1e-07 58.2 62 50.0
MD08G1079100 Malus domestica HOM05D001756 ORTHO05D001581 6.6e-07 57.8 66 53.0
CSS0048145 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 8.6e-07 57.4 70 51.4
FvH4_2g03340 Fragaria vesca HOM05D001756 ORTHO05D001581 8.6e-07 57.4 54 53.7
Gohir.A02G150100 Gossypium hirsutum HOM05D001756 ORTHO05D001581 8.6e-07 57.4 35 71.4
Gohir.D03G030200 Gossypium hirsutum HOM05D001756 ORTHO05D001581 8.6e-07 57.4 35 71.4
Gorai.003G031900 Gossypium raimondii HOM05D001756 ORTHO05D001581 8.6e-07 57.4 35 71.4
Potri.009G085600 Populus trichocarpa HOM05D001756 ORTHO05D001581 8.6e-07 57.4 67 46.3
Sabra16G0181600 Salix brachista HOM05D001756 ORTHO05D001581 8.6e-07 57.4 67 46.3
TAR376G0419 Trochodendron aralioides HOM05D001756 ORTHO05D001581 8.6e-07 57.4 67 49.3
vmacro01947 Vaccinium macrocarpon HOM05D001756 ORTHO05D001581 8.6e-07 57.4 54 53.7
CiPaw.02G001200 Carya illinoinensis HOM05D001756 ORTHO05D001581 1.1e-06 57.0 68 48.5
Cc02_g20030 Coffea canephora HOM05D001756 ORTHO05D001581 1.5e-06 56.6 66 48.5
Duzib116G0348 Durio zibethinus HOM05D001756 ORTHO05D001581 1.5e-06 56.6 67 49.3
Duzib132G0635 Durio zibethinus HOM05D001756 ORTHO05D001581 1.5e-06 56.6 47 57.4
FAN27G0458 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.5e-06 56.6 37 67.6
FAN26G2568 Fragaria x ananassa HOM05D001756 ORTHO05D001581 1.9e-06 56.2 63 47.6
Lsat_1_v5_gn_2_80201 Lactuca sativa HOM05D001756 ORTHO05D001581 1.9e-06 56.2 49 57.1
MD15G1300000 Malus domestica HOM05D001756 ORTHO05D001581 1.9e-06 56.2 63 50.8
Prupe.6G217500 Prunus persica HOM05D001756 ORTHO05D001581 1.9e-06 56.2 58 50.0
Prupe.8G150200 Prunus persica HOM05D001756 ORTHO05D001581 2.5e-06 55.8 67 47.8
RcHm_v2.0_Chr6g0248481 Rosa chinensis HOM05D001756 ORTHO05D001581 2.5e-06 55.8 37 67.6
CiPaw.08G051600 Carya illinoinensis HOM05D001756 ORTHO05D001581 3.3e-06 55.5 67 49.3
CSS0048277 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.3e-06 55.1 58 56.9
CSS0049317 Camellia sinensis var. sinensis HOM05D001756 ORTHO05D001581 4.3e-06 55.1 58 56.9
FAN19G1808 Fragaria x ananassa HOM05D001756 ORTHO05D001581 4.3e-06 55.1 50 54.0
Hma1.2p1_1760F.1_g301210 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 4.3e-06 55.1 67 47.8
Medtr1g106030 Medicago truncatula HOM05D001756 ORTHO05D001581 4.3e-06 55.1 68 41.2
ECA238G4790 Erigeron canadensis HOM05D001756 ORTHO05D001581 5.6e-06 54.7 66 48.5
ECA246G3808 Erigeron canadensis HOM05D001756 ORTHO05D001581 5.6e-06 54.7 35 68.6
Eucgr.H02324 Eucalyptus grandis HOM05D001756 ORTHO05D001581 5.6e-06 54.7 59 47.5
HanXRQChr08g0233231 Helianthus annuus HOM05D001756 ORTHO05D001581 5.6e-06 54.7 37 67.6
Hma1.2p1_2434F.1_g322120 Hydrangea macrophylla HOM05D001756 ORTHO05D001581 5.6e-06 54.7 67 47.8
Rhsim06G0064200 Rhododendron simsii HOM05D001756 ORTHO05D001581 5.6e-06 54.7 51 58.8
THA.LOC104827714 Tarenaya hassleriana HOM05D001756 ORTHO05D001581 5.6e-06 54.7 34 73.5
TWI77G0501 Tripterygium wilfordii HOM05D001756 ORTHO05D001581 5.6e-06 54.7 65 50.8
Actinidia00357 Actinidia chinensis HOM05D001756 ORTHO05D001581 7.3e-06 54.3 47 57.4
HanXRQChr12g0376281 Helianthus annuus HOM05D001756 ORTHO05D001581 7.3e-06 54.3 37 67.6
Thecc.01G075600 Theobroma cacao HOM05D001756 ORTHO05D001581 7.3e-06 54.3 43 62.8
Atru.chr5.2299 Acer truncatum HOM05D001756 ORTHO05D001581 9.5e-06 53.9 68 48.5
EL10Ac6g15597 Beta vulgaris HOM05D001756 ORTHO05D001581 9.5e-06 53.9 45 57.8
CANSAT25G3420 Cannabis sativa HOM05D001756 ORTHO05D001581 9.5e-06 53.9 34 73.5
Cpa.g.c33491 Carica papaya HOM05D001756 ORTHO05D001581 9.5e-06 53.9 66 51.5
CiPaw.07G172800 Carya illinoinensis HOM05D001756 ORTHO05D001581 9.5e-06 53.9 41 61.0
Ciclev10029689m.g Citrus clementina HOM05D001756 ORTHO05D001581 9.5e-06 53.9 65 46.2
Dinv23040 Davidia involucrata HOM05D001756 ORTHO05D001581 9.5e-06 53.9 68 50.0
Eucgr.H02325 Eucalyptus grandis HOM05D001756 ORTHO05D001581 9.5e-06 53.9 68 45.6
FvH4_1g18100 Fragaria vesca HOM05D001756 ORTHO05D001581 9.5e-06 53.9 40 62.5
MD05G1105500 Malus domestica HOM05D001756 ORTHO05D001581 9.5e-06 53.9 40 65.0
MD10G1110000 Malus domestica HOM05D001756 ORTHO05D001581 9.5e-06 53.9 48 58.3


User provided reference genes

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