Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G771.68 Capsicum annuum HOM05D003692 ORTHO05D004295 3.1e-138 495.4 293 100.0
CAN.G132.11 Capsicum annuum HOM05D003692 ORTHO05D004295 3.4e-44 183.0 127 81.1
Peaxi162Scf00527g00735 Petunia axillaris HOM05D003692 ORTHO05D004295 1.1e-42 177.9 117 83.8
CAN.G397.48 Capsicum annuum HOM05D003692 ORTHO05D004295 1.9e-42 177.2 117 82.9
CAN.G947.5 Capsicum annuum HOM05D003692 ORTHO05D004295 3.2e-42 176.4 117 82.9
Solyc09g011030.3 Solanum lycopersicum HOM05D003692 ORTHO05D004295 9.3e-42 174.9 117 82.9
PGSC0003DMG400008824 Solanum tuberosum HOM05D003692 ORTHO05D004295 1.2e-41 174.5 117 82.1
CSS0021952 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 4.6e-41 172.6 117 80.3
Dinv37149 Davidia involucrata HOM05D003692 ORTHO05D004295 4.6e-41 172.6 120 78.3
Oeu001856.1 Olea europaea HOM05D003692 ORTHO05D004295 4.6e-41 172.6 122 77.9
Sopen09g005760 Solanum pennellii HOM05D003692 ORTHO05D004295 7.9e-41 171.8 117 82.1
Dinv35578 Davidia involucrata HOM05D003692 ORTHO05D004295 1.3e-40 171.0 117 79.5
CANSAT35G0909 Cannabis sativa HOM05D003692 ORTHO05D004295 1.8e-40 170.6 117 79.5
Gohir.A04G083600 Gossypium hirsutum HOM05D003692 ORTHO05D004295 1.8e-40 170.6 117 79.5
Thecc.05G036000 Theobroma cacao HOM05D003692 ORTHO05D004295 1.8e-40 170.6 117 79.5
Gohir.D04G122300 Gossypium hirsutum HOM05D003692 ORTHO05D004295 2.3e-40 170.2 117 78.6
Gorai.012G105200 Gossypium raimondii HOM05D003692 ORTHO05D004295 2.3e-40 170.2 117 78.6
Lj2A91G57 Lonicera japonica HOM05D003692 ORTHO05D004295 2.3e-40 170.2 117 78.6
Duzib128G0550 Durio zibethinus HOM05D003692 ORTHO05D004295 3.0e-40 169.9 117 78.6
QL07p030140 Quercus lobata HOM05D003692 ORTHO05D004295 3.9e-40 169.5 117 77.8
Nitab4.5_0000705g0070 Nicotiana tabacum HOM05D003692 ORTHO05D004295 8.7e-40 168.3 117 79.5
QL07p030873 Quercus lobata HOM05D003692 ORTHO05D004295 1.5e-39 167.5 117 76.9
GSVIVG01034132001 Vitis vinifera HOM05D003692 ORTHO05D004295 1.5e-39 167.5 117 76.9
MBI05_g35626_MAGBIO Magnolia biondii HOM05D003692 ORTHO05D004295 2.5e-39 166.8 120 76.7
Oeu023073.1 Olea europaea HOM05D003692 ORTHO05D004295 2.5e-39 166.8 122 76.2
SGA_v2.0_scaffold126G33762 Striga asiatica HOM05D003692 ORTHO05D004295 3.3e-39 166.4 117 77.8
CiPaw.09G195400 Carya illinoinensis HOM05D003692 ORTHO05D004295 4.3e-39 166.0 117 76.1
Ciclev10011911m.g Citrus clementina HOM05D003692 ORTHO05D004295 5.6e-39 165.6 117 76.9
Potri.016G100500 Populus trichocarpa HOM05D003692 ORTHO05D004295 5.6e-39 165.6 117 74.4
TWI38G1706 Tripterygium wilfordii HOM05D003692 ORTHO05D004295 5.6e-39 165.6 117 76.1
ClCG04G008060 Citrullus lanatus HOM05D003692 ORTHO05D004295 7.4e-39 165.2 129 72.9
HanXRQChr13g0406761 Helianthus annuus HOM05D003692 ORTHO05D004295 7.4e-39 165.2 117 77.8
Actinidia26484 Actinidia chinensis HOM05D003692 ORTHO05D004295 1.3e-38 164.5 117 78.6
Potri.006G088000 Populus trichocarpa HOM05D003692 ORTHO05D004295 1.3e-38 164.5 117 76.1
Sabra06G0067100 Salix brachista HOM05D003692 ORTHO05D004295 1.3e-38 164.5 121 75.2
ATR0559G081 Amborella trichopoda HOM05D003692 ORTHO05D004295 1.6e-38 164.1 145 64.8
Cc06_g02380 Coffea canephora HOM05D003692 ORTHO05D004295 1.6e-38 164.1 117 77.8
Glyma.03G070400 Glycine max HOM05D003692 ORTHO05D004295 2.1e-38 163.7 117 75.2
Phvul.010G011500 Phaseolus vulgaris HOM05D003692 ORTHO05D004295 2.1e-38 163.7 117 75.2
Actinidia11270 Actinidia chinensis HOM05D003692 ORTHO05D004295 2.8e-38 163.3 116 78.4
Sed0012536 Sechium edule HOM05D003692 ORTHO05D004295 2.8e-38 163.3 164 61.0
Medtr4g021570 Medicago truncatula HOM05D003692 ORTHO05D004295 3.7e-38 162.9 117 74.4
Nitab4.5_0003394g0020 Nicotiana tabacum HOM05D003692 ORTHO05D004295 3.7e-38 162.9 117 78.6
vmacro20176 Vaccinium macrocarpon HOM05D003692 ORTHO05D004295 3.7e-38 162.9 117 76.1
HanXRQChr01g0003311 Helianthus annuus HOM05D003692 ORTHO05D004295 4.8e-38 162.5 117 76.1
Lsat_1_v5_gn_5_154881 Lactuca sativa HOM05D003692 ORTHO05D004295 4.8e-38 162.5 117 76.1
TAR560G0002 Trochodendron aralioides HOM05D003692 ORTHO05D004295 4.8e-38 162.5 117 76.1
MELO3C003143.2 Cucumis melo HOM05D003692 ORTHO05D004295 6.2e-38 162.2 117 77.8
Lj3g0027938 Lotus japonicus HOM05D003692 ORTHO05D004295 6.2e-38 162.2 121 73.6
Psat7g237280 Pisum sativum HOM05D003692 ORTHO05D004295 6.2e-38 162.2 117 73.5
TAR623G0629 Trochodendron aralioides HOM05D003692 ORTHO05D004295 6.2e-38 162.2 117 76.1
AUR62042383 Chenopodium quinoa HOM05D003692 ORTHO05D004295 8.1e-38 161.8 125 69.6
CsaV3_4G025150 Cucumis sativus L. HOM05D003692 ORTHO05D004295 8.1e-38 161.8 117 76.1
Rhsim05G0194700 Rhododendron simsii HOM05D003692 ORTHO05D004295 8.1e-38 161.8 121 71.9
arahy.Tifrunner.gnm1.ann1.R5ZI8K Arachis hypogaea HOM05D003692 ORTHO05D004295 1.4e-37 161.0 157 61.8
Nn2g13418 Nelumbo nucifera HOM05D003692 ORTHO05D004295 1.4e-37 161.0 121 72.7
arahy.Tifrunner.gnm1.ann1.C3169U Arachis hypogaea HOM05D003692 ORTHO05D004295 1.8e-37 160.6 117 74.4
Cfa017343 Carpinus fangiana HOM05D003692 ORTHO05D004295 1.8e-37 160.6 117 75.2
Haze_20825 Corylus avellana HOM05D003692 ORTHO05D004295 2.4e-37 160.2 117 75.2
Manes.09G092685 Manihot esculenta HOM05D003692 ORTHO05D004295 2.4e-37 160.2 117 75.2
MSTRG.10251 Avicennia marina HOM05D003692 ORTHO05D004295 3.1e-37 159.8 117 73.5
MSTRG.19074 Avicennia marina HOM05D003692 ORTHO05D004295 3.1e-37 159.8 117 75.2
THA.LOC104816257 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 3.1e-37 159.8 117 73.5
Lj3A965G75 Lonicera japonica HOM05D003692 ORTHO05D004295 5.3e-37 159.1 117 75.2
TAR369G0528 Trochodendron aralioides HOM05D003692 ORTHO05D004295 5.3e-37 159.1 117 75.2
CDE07G1498 Ceratophyllum demersum HOM05D003692 ORTHO05D004295 6.9e-37 158.7 117 72.6
Hma1.2p1_0877F.1_g231720 Hydrangea macrophylla HOM05D003692 ORTHO05D004295 9.0e-37 158.3 117 74.4
Prupe.6G258500 Prunus persica HOM05D003692 ORTHO05D004295 9.0e-37 158.3 117 74.4
SGA_v2.0_scaffold75G24963 Striga asiatica HOM05D003692 ORTHO05D004295 9.0e-37 158.3 116 75.0
CSS0018872 Camellia sinensis var. sinensis HOM05D003692 ORTHO05D004295 1.2e-36 157.9 117 73.5
AUR62043522 Chenopodium quinoa HOM05D003692 ORTHO05D004295 1.2e-36 157.9 117 70.9
MD12G1145000 Malus domestica HOM05D003692 ORTHO05D004295 1.2e-36 157.9 117 72.6
Aqoxy1G00886 Aquilegia oxysepala HOM05D003692 ORTHO05D004295 1.5e-36 157.5 199 49.7
Actinidia05324 Actinidia chinensis HOM05D003692 ORTHO05D004295 2.0e-36 157.1 117 72.6
PSO339G0014 Papaver somniferum HOM05D003692 ORTHO05D004295 2.6e-36 156.8 117 72.6
VMungo0331G1001 Vigna mungo HOM05D003692 ORTHO05D004295 2.6e-36 156.8 117 72.6
Ah.12g059970 Amaranthus hybridus HOM05D003692 ORTHO05D004295 3.4e-36 156.4 117 71.8
CARHR083710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 5.8e-36 155.6 117 73.5
Thhalv10020978m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 5.8e-36 155.6 117 72.6
RcHm_v2.0_Chr3g0462931 Rosa chinensis HOM05D003692 ORTHO05D004295 5.8e-36 155.6 117 75.2
BcaC05g29519 Brassica carinata HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
BcaC05g29662 Brassica carinata HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
C05p58660 Brassica napus HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
BolC5t34516H Brassica oleracea HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
BraA05t22745Z Brassica rapa HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
MD04G1131900 Malus domestica HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 72.6
Sp3g07730 Schrenkiella parvula HOM05D003692 ORTHO05D004295 7.6e-36 155.2 117 71.8
Aa31LG3G1840 Aethionema arabicum HOM05D003692 ORTHO05D004295 1.0e-35 154.8 117 71.8
AL3G20500 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 1.7e-35 154.1 117 71.8
Hund07755 Selenicereus undatus HOM05D003692 ORTHO05D004295 1.7e-35 154.1 116 72.4
ECA248G3834 Erigeron canadensis HOM05D003692 ORTHO05D004295 2.2e-35 153.7 117 71.8
PSO513G0124 Papaver somniferum HOM05D003692 ORTHO05D004295 2.2e-35 153.7 117 71.8
Atru.chr8.2010 Acer truncatum HOM05D003692 ORTHO05D004295 8.4e-35 151.8 117 73.5
AT3G09350 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 8.4e-35 151.8 117 70.9
Carub.0003s0846 Capsella rubella HOM05D003692 ORTHO05D004295 8.4e-35 151.8 117 70.9
EL10As1g23134 Beta vulgaris HOM05D003692 ORTHO05D004295 1.1e-34 151.4 117 70.1
SEGI_14146 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 1.4e-34 151.0 117 70.1
FAN02G3395 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.9e-34 150.6 117 72.6
FAN05G1146 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.9e-34 150.6 117 72.6
FvH4_6g11350 Fragaria vesca HOM05D003692 ORTHO05D004295 2.5e-34 150.2 117 71.8
FAN14G0506 Fragaria x ananassa HOM05D003692 ORTHO05D004295 2.5e-34 150.2 117 71.8
SGA_v2.0_scaffold94G28572 Striga asiatica HOM05D003692 ORTHO05D004295 3.2e-34 149.8 145 59.3
BcaC01g04230 Brassica carinata HOM05D003692 ORTHO05D004295 5.5e-34 149.1 117 70.1
C03p43660 Brassica napus HOM05D003692 ORTHO05D004295 5.5e-34 149.1 117 70.1
FAN14G3612 Fragaria x ananassa HOM05D003692 ORTHO05D004295 5.5e-34 149.1 117 70.9
A03p36010 Brassica napus HOM05D003692 ORTHO05D004295 7.1e-34 148.7 117 69.2
BolC3t16634H Brassica oleracea HOM05D003692 ORTHO05D004295 7.1e-34 148.7 117 69.2
FAN09G2852 Fragaria x ananassa HOM05D003692 ORTHO05D004295 7.1e-34 148.7 117 71.8
BcaB03g11607 Brassica carinata HOM05D003692 ORTHO05D004295 9.3e-34 148.3 117 70.9
Thhalv10010482m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 9.3e-34 148.3 117 67.5
SEGI_33439 Sequoiadendron giganteum HOM05D003692 ORTHO05D004295 9.3e-34 148.3 116 69.8
Os03g0822700 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 1.6e-33 147.5 117 67.5
unitig_8.g4279 Utricularia gibba HOM05D003692 ORTHO05D004295 2.1e-33 147.1 197 48.2
Os03g0271400 Oryza sativa ssp. japonica HOM05D003692 ORTHO05D004295 2.7e-33 146.7 117 65.8
BraA03t12773Z Brassica rapa HOM05D003692 ORTHO05D004295 3.5e-33 146.4 145 57.9
Carub.0005s2038 Capsella rubella HOM05D003692 ORTHO05D004295 4.6e-33 146.0 117 66.7
PSO478G2467 Papaver somniferum HOM05D003692 ORTHO05D004295 4.6e-33 146.0 117 68.4
Zm00001eb062800 Zea mays HOM05D003692 ORTHO05D004295 4.6e-33 146.0 137 61.3
CAN.G597.5 Capsicum annuum HOM05D003692 ORTHO05D004295 7.9e-33 145.2 105 76.2
HPP92_006643 Vanilla planifolia HOM05D003692 ORTHO05D004295 6.7e-32 142.1 117 65.8
AL6G11380 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 3.3e-31 139.8 117 63.2
Zm00001eb211620 Zea mays HOM05D003692 ORTHO05D004295 1.3e-30 137.9 116 63.8
AT5G02150 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 2.1e-30 137.1 117 63.2
CARHR211210 Cardamine hirsuta HOM05D003692 ORTHO05D004295 2.8e-30 136.7 148 56.8
RcHm_v2.0_Chr7g0180681 Rosa chinensis HOM05D003692 ORTHO05D004295 1.1e-29 134.8 118 67.8
Thhalv10014140m.g Eutrema salsugineum HOM05D003692 ORTHO05D004295 1.8e-29 134.0 117 63.2
FvH4_5g15390 Fragaria vesca HOM05D003692 ORTHO05D004295 1.3e-27 127.9 118 65.3
FAN18G0330 Fragaria x ananassa HOM05D003692 ORTHO05D004295 1.3e-27 127.9 118 65.3
Lalb_Chr12g0209541 Lupinus albus HOM05D003692 ORTHO05D004295 2.9e-27 126.7 117 62.4
Pp3c5_26180 Physcomitrium patens HOM05D003692 ORTHO05D004295 2.9e-27 126.7 117 61.5
FAN08G2733 Fragaria x ananassa HOM05D003692 ORTHO05D004295 5.0e-27 125.9 118 64.4
Carub.0006s0099 Capsella rubella HOM05D003692 ORTHO05D004295 8.4e-27 125.2 163 47.9
Cpa.g.sc40.66 Carica papaya HOM05D003692 ORTHO05D004295 1.1e-26 124.8 134 56.0
Eucgr.A01287 Eucalyptus grandis HOM05D003692 ORTHO05D004295 1.1e-26 124.8 117 61.5
COL.COLO4_14767 Corchorus olitorius HOM05D003692 ORTHO05D004295 1.4e-26 124.4 117 61.5
PSO675G1352 Papaver somniferum HOM05D003692 ORTHO05D004295 5.5e-26 122.5 118 61.0
A05p39620 Brassica napus HOM05D002396 ORTHO05D004295 3.5e-25 119.8 117 59.8
Glyma.01G103200 Glycine max HOM05D003692 ORTHO05D004295 5.1e-24 115.9 117 57.3
AagrBONN_evm.TU.Sc2ySwM_368.3385 Anthoceros agrestis HOM05D003692 ORTHO05D004295 1.5e-23 114.4 117 53.8
AL5G34790 Arabidopsis lyrata HOM05D003692 ORTHO05D004295 4.3e-23 112.8 117 54.7
Migut.J00308 Erythranthe guttata HOM05D003692 ORTHO05D004295 7.4e-23 112.1 117 55.6
Ca_11500_v3 Cicer arietinum L. HOM05D003692 ORTHO05D004295 1.6e-22 110.9 117 56.4
CBR_g66724 Chara braunii HOM05D003692 ORTHO05D004295 2.2e-22 110.5 117 50.4
ECA248G3146 Erigeron canadensis HOM05D003692 ORTHO05D004295 2.8e-22 110.2 87 69.0
PGR031G2878 Punica granatum HOM05D003692 ORTHO05D004295 2.8e-22 110.2 117 55.6
FAN13G1535 Fragaria x ananassa HOM05D003692 ORTHO05D004295 3.7e-22 109.8 99 64.6
QL07p026959 Quercus lobata HOM05D003692 ORTHO05D004295 4.8e-22 109.4 77 76.6
TPR.G5579 Trifolium pratense HOM05D003692 ORTHO05D004295 3.1e-21 106.7 63 85.7
Lalb_Chr07g0192991 Lupinus albus HOM05D003692 ORTHO05D004295 4.1e-21 106.3 117 53.8
THA.LOC104823413 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 2.0e-20 104.0 64 82.8
DCAR_012112 Daucus carota HOM05D003692 ORTHO05D004295 4.5e-20 102.8 64 81.2
BcaB04g18532 Brassica carinata HOM05D003692 ORTHO05D004295 5.9e-20 102.4 117 53.8
Sc07g0007060 Simmondsia chinensis HOM05D003692 ORTHO05D004295 7.7e-20 102.1 201 39.3
CARHR163710 Cardamine hirsuta HOM05D003692 ORTHO05D004295 8.5e-19 98.6 113 53.1
Pp3c16_19440 Physcomitrium patens HOM05D003692 ORTHO05D004295 1.9e-18 97.4 117 51.3
BcaB01g00236 Brassica carinata HOM05D003692 ORTHO05D004295 3.2e-18 96.7 63 76.2
BcaC07g39737 Brassica carinata HOM05D003692 ORTHO05D004295 3.2e-18 96.7 62 77.4
A09p46790 Brassica napus HOM05D003692 ORTHO05D004295 3.2e-18 96.7 62 77.4
C08p29100 Brassica napus HOM05D003692 ORTHO05D004295 3.2e-18 96.7 62 77.4
BolC8t50511H Brassica oleracea HOM05D003692 ORTHO05D004295 3.2e-18 96.7 62 77.4
AT3G53800 Arabidopsis thaliana HOM05D003692 ORTHO05D004295 7.2e-18 95.5 117 49.6
Sp5g08580 Schrenkiella parvula HOM05D003692 ORTHO05D004295 1.6e-17 94.4 61 78.7
BraA09t40139Z Brassica rapa HOM05D003692 ORTHO05D004295 2.1e-17 94.0 61 77.0
Zm00001eb012160 Zea mays HOM05D003692 ORTHO05D004295 6.7e-16 89.0 73 64.4
ECA248G3804 Erigeron canadensis HOM05D003692 ORTHO05D004295 2.5e-15 87.0 117 48.7
C05p47620 Brassica napus HOM05D003692 ORTHO05D027419 3.7e-14 83.2 64 68.8
CAN.G27.8 Capsicum annuum HOM05D006866 ORTHO05D008689 4.8e-14 82.8 90 67.8
SMO302G0018 Selaginella moellendorffii HOM05D003692 ORTHO05D004295 4.8e-14 82.8 117 42.7
Mapoly0070s0083 Marchantia polymorpha HOM05D003692 ORTHO05D004295 2.4e-13 80.5 130 40.0
CAN.G257.66 Capsicum annuum HOM05D010219 ORTHO05D012838 1.5e-12 77.8 73 58.9
THA.LOC104806556 Tarenaya hassleriana HOM05D003692 ORTHO05D004295 3.8e-11 73.2 95 42.1
CAN.G566.23 Capsicum annuum HOM05D000103 ORTHO05D012838 1.4e-10 71.2 90 73.3
PGSC0003DMG400028024 Solanum tuberosum HOM05D010219 ORTHO05D012838 7.9e-09 65.5 94 59.6
PGSC0003DMG400022970 Solanum tuberosum HOM05D010219 ORTHO05D012838 1.4e-08 64.7 94 57.4
MCO10G278 Micromonas commoda HOM05D003692 ORTHO05D004295 3.7e-06 56.6 139 30.2


User provided reference genes

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