Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G771.51 Capsicum annuum HOM05D006061 ORTHO05D007450 0.0e+00 1291.9 641 100.0
PGSC0003DMG401020085 Solanum tuberosum HOM05D006061 ORTHO05D007450 3.2e-297 1024.6 642 80.8
Sopen06g035030 Solanum pennellii HOM05D006061 ORTHO05D007450 3.2e-289 998.0 641 79.1
Solyc06g083640.4 Solanum lycopersicum HOM05D006061 ORTHO05D007450 1.1e-286 989.6 641 78.5
Nitab4.5_0006211g0030 Nicotiana tabacum HOM05D006061 ORTHO05D007450 5.5e-273 944.1 639 75.9
Nitab4.5_0002085g0150 Nicotiana tabacum HOM05D006061 ORTHO05D007450 4.7e-272 941.0 639 75.7
Peaxi162Scf00517g00313 Petunia axillaris HOM05D006061 ORTHO05D007450 3.7e-261 904.8 654 70.6
Migut.N02246 Erythranthe guttata HOM05D006061 ORTHO05D007450 1.1e-167 594.3 639 50.5
Prupe.8G209500 Prunus persica HOM05D006061 ORTHO05D007450 1.4e-167 594.0 644 50.8
SGA_v2.0_scaffold3G01591 Striga asiatica HOM05D006061 ORTHO05D007450 2.0e-166 590.1 655 49.5
Actinidia30104 Actinidia chinensis HOM05D006061 ORTHO05D007450 5.9e-166 588.6 622 51.0
MSTRG.12506 Avicennia marina HOM05D006061 ORTHO05D007450 1.2e-163 580.9 642 49.4
SalBow6G4925 Salvia bowleyana HOM05D006061 ORTHO05D007450 2.8e-160 569.7 639 49.0
Duzib138G1183 Durio zibethinus HOM05D006061 ORTHO05D007450 7.0e-159 565.1 640 49.4
TAR365G1230 Trochodendron aralioides HOM05D006061 ORTHO05D007450 4.5e-158 562.4 648 49.5
Thecc.01G244800 Theobroma cacao HOM05D006061 ORTHO05D007450 1.0e-157 561.2 643 49.3
Cfa002517 Carpinus fangiana HOM05D006061 ORTHO05D007450 2.2e-157 560.1 641 49.1
MD10G1171000 Malus domestica HOM05D006061 ORTHO05D007450 5.0e-157 558.9 644 48.8
Gorai.007G151600 Gossypium raimondii HOM05D006061 ORTHO05D007450 2.6e-153 546.6 640 49.1
Gohir.A11G135100 Gossypium hirsutum HOM05D006061 ORTHO05D007450 2.4e-151 540.0 643 48.8
RcHm_v2.0_Chr6g0285561 Rosa chinensis HOM05D006061 ORTHO05D007450 9.1e-151 538.1 646 47.5
TWI59G0704 Tripterygium wilfordii HOM05D006061 ORTHO05D007450 4.5e-150 535.8 642 48.3
Atru.chr5.1926 Acer truncatum HOM05D006061 ORTHO05D007450 3.8e-149 532.7 640 47.2
Gohir.D11G141300 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.1e-148 531.2 643 48.5
Lj1A80G16 Lonicera japonica HOM05D006061 ORTHO05D007450 4.2e-148 529.3 649 47.9
Potri.014G194800 Populus trichocarpa HOM05D006061 ORTHO05D007450 1.4e-146 524.2 642 46.9
FvH4_2g19870 Fragaria vesca HOM05D006061 ORTHO05D007450 5.2e-146 522.3 646 46.1
Ciclev10019392m.g Citrus clementina HOM05D006061 ORTHO05D007450 4.4e-145 519.2 638 48.3
GSVIVG01028489001 Vitis vinifera HOM05D006061 ORTHO05D007450 5.7e-145 518.8 591 49.6
ClCG09G009420 Citrullus lanatus HOM05D006061 ORTHO05D007450 2.4e-143 513.5 640 46.1
Lsat_1_v5_gn_8_90281 Lactuca sativa HOM05D006061 ORTHO05D007450 4.1e-143 512.7 641 46.2
Nn1g03086 Nelumbo nucifera HOM05D006061 ORTHO05D007450 4.5e-142 509.2 640 45.6
CsaV3_7G025440 Cucumis sativus L. HOM05D006061 ORTHO05D007450 1.0e-141 508.1 644 47.2
Aqoxy5G00054 Aquilegia oxysepala HOM05D006061 ORTHO05D007450 1.3e-141 507.7 645 46.0
HanXRQChr13g0409031 Helianthus annuus HOM05D006061 ORTHO05D007450 3.8e-141 506.1 641 45.4
Sc05g0002480 Simmondsia chinensis HOM05D006061 ORTHO05D007450 2.5e-140 503.4 642 45.2
Eucgr.H00824 Eucalyptus grandis HOM05D006061 ORTHO05D007450 8.9e-138 495.0 641 45.2
Rhsim13G0041800 Rhododendron simsii HOM05D006061 ORTHO05D000758 7.5e-137 491.9 738 41.5
THA.LOC104814544 Tarenaya hassleriana HOM05D006061 ORTHO05D007450 3.7e-136 489.6 641 45.4
CANSAT01G1389 Cannabis sativa HOM05D006061 ORTHO05D007450 8.3e-136 488.4 644 45.7
Sabra14G0142900 Salix brachista HOM05D006061 ORTHO05D007450 1.9e-135 487.3 605 46.3
CiPaw.04G108700 Carya illinoinensis HOM05D006061 ORTHO05D007450 9.2e-135 485.0 556 49.6
Haze_24749 Corylus avellana HOM05D006061 ORTHO05D007450 4.6e-134 482.6 718 42.3
Glyma.03G169900 Glycine max HOM05D006061 ORTHO05D007450 1.0e-133 481.5 636 45.0
Cc01_g08490 Coffea canephora HOM05D006061 ORTHO05D007450 1.7e-133 480.7 504 50.0
PGR083G1193 Punica granatum HOM05D006061 ORTHO05D007450 3.0e-133 479.9 643 45.1
PSO170G3920 Papaver somniferum HOM05D006061 ORTHO05D007450 3.9e-133 479.6 637 43.0
MBI07_g08916_MAGBIO Magnolia biondii HOM05D006061 ORTHO05D007450 8.6e-133 478.4 645 42.8
AUR62008856 Chenopodium quinoa HOM05D006061 ORTHO05D007450 4.3e-132 476.1 639 42.1
ECA236G2978 Erigeron canadensis HOM05D006061 ORTHO05D000758 7.3e-132 475.3 640 43.4
EL10Ac7g17761 Beta vulgaris HOM05D006061 ORTHO05D007450 9.5e-132 474.9 656 42.5
Glyma.19G171100 Glycine max HOM05D006061 ORTHO05D007450 8.0e-131 471.9 637 44.4
BcaC06g36697 Brassica carinata HOM05D006061 ORTHO05D007450 1.4e-130 471.1 638 44.0
BolC7t40535H Brassica oleracea HOM05D006061 ORTHO05D007450 1.4e-130 471.1 638 44.0
Phvul.001G168300 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 2.3e-130 470.3 643 44.0
C07p00980 Brassica napus HOM05D006061 ORTHO05D007450 3.1e-130 469.9 638 43.9
A07p00530 Brassica napus HOM05D006061 ORTHO05D007450 5.8e-129 465.7 640 43.8
Lj1g0026990 Lotus japonicus HOM05D006061 ORTHO05D007450 7.5e-129 465.3 643 44.3
BraA07t27847Z Brassica rapa HOM05D006061 ORTHO05D007450 9.8e-129 464.9 640 43.9
Manes.12G040800 Manihot esculenta HOM05D006061 ORTHO05D007450 1.7e-128 464.2 495 52.5
arahy.Tifrunner.gnm1.ann1.J8EIPB Arachis hypogaea HOM05D006061 ORTHO05D007450 3.7e-128 463.0 643 43.7
BcaB03g16813 Brassica carinata HOM05D006061 ORTHO05D007450 1.1e-127 461.5 641 43.5
COL.COLO4_08163 Corchorus olitorius HOM05D006061 ORTHO05D007450 1.9e-127 460.7 686 41.8
arahy.Tifrunner.gnm1.ann1.4WTK5H Arachis hypogaea HOM05D006061 ORTHO05D007450 3.2e-127 459.9 643 43.4
Ca_08767_v3 Cicer arietinum L. HOM05D006061 ORTHO05D007450 4.6e-126 456.1 641 44.0
Thhalv10001935m.g Eutrema salsugineum HOM05D006061 ORTHO05D007450 1.3e-125 454.5 641 43.4
AT2G20210 Arabidopsis thaliana HOM05D006061 ORTHO05D007450 6.6e-125 452.2 642 44.4
AL3G47870 Arabidopsis lyrata HOM05D006061 ORTHO05D007450 1.6e-123 447.6 640 43.0
Hund05498 Selenicereus undatus HOM05D006061 ORTHO05D007450 7.5e-121 438.7 644 41.5
Aa31LG8G17130 Aethionema arabicum HOM05D006061 ORTHO05D007450 9.9e-121 438.3 640 42.8
Psat3g050240 Pisum sativum HOM05D006061 ORTHO05D007450 2.2e-120 437.2 643 42.1
TPR.G7560 Trifolium pratense HOM05D006061 ORTHO05D007450 1.2e-118 431.4 650 43.2
FAN27G0211 Fragaria x ananassa HOM05D006061 ORTHO05D007450 2.3e-117 427.2 656 41.9
Ah.15g093400 Amaranthus hybridus HOM05D006061 ORTHO05D007450 1.9e-116 424.1 638 39.8
vmacro02729 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.8e-114 417.5 409 55.5
Medtr7g099450 Medicago truncatula HOM05D006061 ORTHO05D007450 1.9e-108 397.5 656 40.9
Sp3g33450 Schrenkiella parvula HOM05D006061 ORTHO05D007450 2.4e-106 390.6 496 46.2
ATR0787G120 Amborella trichopoda HOM05D006061 ORTHO05D007450 7.1e-103 379.0 673 37.6
Carub.0003s3454 Capsella rubella HOM05D006061 ORTHO05D007450 1.7e-101 374.4 496 45.4
FAN15G2648 Fragaria x ananassa HOM05D006061 ORTHO05D007450 8.1e-91 339.0 408 49.0
CSS0041718 Camellia sinensis var. sinensis HOM05D006061 ORTHO05D007450 4.3e-84 316.6 342 50.6
AUR62025388 Chenopodium quinoa HOM05D006061 ORTHO05D007450 1.1e-79 302.0 424 42.7
Lalb_Chr01g0019421 Lupinus albus HOM05D006061 ORTHO05D007450 5.1e-77 293.1 384 44.3
Sed0025129 Sechium edule HOM05D006061 ORTHO05D007450 3.2e-71 273.9 330 49.1
Cpa.g.sc8.208 Carica papaya HOM05D006061 ORTHO05D007450 9.1e-66 255.8 323 46.1
VMungo1383G3365 Vigna mungo HOM05D006061 ORTHO05D007450 8.5e-64 249.2 332 46.1
Cpa.g.sc8.207 Carica papaya HOM05D006061 ORTHO05D007450 1.2e-62 245.4 291 48.5
MELO3C024149.2 Cucumis melo HOM05D006061 ORTHO05D007450 1.0e-61 242.3 291 49.1
Oeu039640.1 Olea europaea HOM05D006061 ORTHO05D007450 8.8e-61 239.2 238 52.9
unitig_8.g4624 Utricularia gibba HOM05D006061 ORTHO05D007450 2.4e-58 231.1 292 46.6
Pp3c7_21970 Physcomitrium patens HOM05D006061 ORTHO05D007450 3.7e-51 207.2 545 29.5
CARHR110700 Cardamine hirsuta HOM05D006061 ORTHO05D007450 9.1e-50 202.6 288 44.1
DCAR_004700 Daucus carota HOM05D000065 ORTHO05D007450 8.0e-46 189.5 418 34.2
SEGI_05721 Sequoiadendron giganteum HOM05D006061 ORTHO05D007450 5.7e-44 183.3 345 35.1
Lalb_Chr01g0019411 Lupinus albus HOM05D006061 ORTHO05D007450 6.3e-43 179.9 238 45.8
SMO356G0042 Selaginella moellendorffii HOM05D006061 ORTHO05D007450 3.5e-41 174.1 523 28.7
VMungo1383G3184 Vigna mungo HOM05D006061 ORTHO05D007450 3.2e-39 167.5 249 37.8
Zm00001eb133830 Zea mays HOM05D006061 ORTHO05D007450 1.4e-37 162.2 282 36.5
vmacro02728 Vaccinium macrocarpon HOM05D006061 ORTHO05D007450 1.0e-32 146.0 294 33.0
Cc00_g31740 Coffea canephora HOM05D006061 ORTHO05D007450 7.2e-31 139.8 146 52.1
HPP92_014830 Vanilla planifolia HOM05D006061 ORTHO05D007450 1.2e-30 139.0 435 26.0
Phvul.004G074200 Phaseolus vulgaris HOM05D006061 ORTHO05D007450 7.0e-26 123.2 186 44.1
Os12g0228900 Oryza sativa ssp. japonica HOM05D006061 ORTHO05D007450 1.2e-25 122.5 209 39.2
Oeu039641.2 Olea europaea HOM05D006061 ORTHO05D007450 3.5e-25 120.9 164 39.6
CBR_g31999 Chara braunii HOM05D006061 ORTHO05D007450 1.8e-21 108.6 511 26.2
Zm00001eb008990 Zea mays HOM05D006061 ORTHO05D007450 2.2e-19 101.7 163 35.6
Zm00001eb428270 Zea mays HOM05D006061 ORTHO05D007450 9.2e-18 96.3 179 33.5
Rhsim13G0055400 Rhododendron simsii HOM05D006061 ORTHO05D007450 1.2e-17 95.9 135 44.4
PSO675G3076 Papaver somniferum HOM05D006061 ORTHO05D007450 1.7e-16 92.0 363 25.6
CARHR174390 Cardamine hirsuta HOM05D006061 ORTHO05D007450 2.5e-15 88.2 101 47.5
Zm00001eb120120 Zea mays HOM05D006061 ORTHO05D007450 9.5e-15 86.3 139 37.4
SHI26842 Sapria himalayana HOM05D006061 ORTHO05D007450 2.1e-14 85.1 135 41.5
Gorai.008G101100 Gossypium raimondii HOM05D006061 ORTHO05D007450 4.7e-14 84.0 138 39.1
Gohir.D10G064900 Gossypium hirsutum HOM05D006061 ORTHO05D007450 1.8e-13 82.0 141 39.0
Psat0ss8385g0040 Pisum sativum HOM05D006061 ORTHO05D007450 1.4e-10 72.4 130 30.8
Psat1g093320 Pisum sativum HOM05D006061 ORTHO05D007450 1.4e-10 72.4 133 31.6
Zm00001eb399320 Zea mays HOM05D000103 ORTHO05D007450 1.2e-09 69.3 125 34.4
SHI26843 Sapria himalayana HOM05D006061 ORTHO05D007450 3.5e-09 67.8 164 31.7
CAN.G1642.4 Capsicum annuum HOM05D006061 ORTHO05D115332 2.3e-08 65.1 58 60.3
SHI26848 Sapria himalayana HOM05D006061 ORTHO05D007450 8.6e-08 63.2 92 41.3
Zm00001eb068850 Zea mays HOM05D006061 ORTHO05D007450 6.2e-06 57.0 110 32.7


User provided reference genes

Program Settings