Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G770.8 Capsicum annuum HOM05D003249 ORTHO05D003626 1.3e-73 279.6 144 100.0
Peaxi162Scf00165g00111 Petunia axillaris HOM05D003249 ORTHO05D003626 3.3e-24 115.5 185 44.9
CAN.G770.6 Capsicum annuum HOM05D003249 ORTHO05D003626 6.2e-23 111.3 185 45.4
Solyc09g010840.1 Solanum lycopersicum HOM05D003249 ORTHO05D003626 6.9e-22 107.8 184 44.6
Sopen09g005570 Solanum pennellii HOM05D003249 ORTHO05D003626 9.0e-22 107.5 185 44.3
PGSC0003DMG400008834 Solanum tuberosum HOM05D003249 ORTHO05D003626 1.2e-21 107.1 185 43.8
Nitab4.5_0007139g0020 Nicotiana tabacum HOM05D003249 ORTHO05D003626 2.0e-21 106.3 185 44.3
Actinidia13145 Actinidia chinensis HOM05D003249 ORTHO05D003626 4.2e-19 98.6 181 42.0
Oeu049252.1 Olea europaea HOM05D003249 ORTHO05D003626 9.3e-19 97.4 185 41.1
Atru.chr8.1979 Acer truncatum HOM05D003249 ORTHO05D003626 8.7e-17 90.9 186 40.3
Duzib128G1068 Durio zibethinus HOM05D003249 ORTHO05D003626 8.7e-17 90.9 185 42.2
Nitab4.5_0003845g0050 Nicotiana tabacum HOM05D003249 ORTHO05D003626 1.1e-16 90.5 187 40.1
Duzib093G0316 Durio zibethinus HOM05D003249 ORTHO05D003626 3.3e-16 89.0 185 42.2
Thecc.05G039300 Theobroma cacao HOM05D003249 ORTHO05D003626 3.3e-16 89.0 185 41.1
COL.COLO4_14794 Corchorus olitorius HOM05D003249 ORTHO05D003626 4.3e-16 88.6 185 42.2
Cpa.g.sc333.1 Carica papaya HOM05D003249 ORTHO05D003626 9.6e-16 87.4 185 41.6
Duzib106G1674 Durio zibethinus HOM05D003249 ORTHO05D003626 4.8e-15 85.1 185 41.1
TWI74G0683 Tripterygium wilfordii HOM05D003249 ORTHO05D003626 8.1e-15 84.3 187 39.6
Gohir.A04G082600 Gossypium hirsutum HOM05D003249 ORTHO05D003626 3.1e-14 82.4 183 39.3
Dinv37168 Davidia involucrata HOM05D003249 ORTHO05D003626 4.0e-14 82.0 168 41.7
Gohir.D04G121600 Gossypium hirsutum HOM05D003249 ORTHO05D003626 4.0e-14 82.0 183 39.3
Gorai.012G104100 Gossypium raimondii HOM05D003249 ORTHO05D003626 4.0e-14 82.0 183 39.3
RcHm_v2.0_Chr3g0466491 Rosa chinensis HOM05D003249 ORTHO05D003626 4.0e-14 82.0 185 37.8
QL07p048411 Quercus lobata HOM05D003249 ORTHO05D003626 5.3e-14 81.6 185 41.1
QL07p048500 Quercus lobata HOM05D003249 ORTHO05D003626 5.3e-14 81.6 185 41.1
FAN05G3825 Fragaria x ananassa HOM05D003249 ORTHO05D003626 1.2e-13 80.5 189 38.1
Manes.09G092900 Manihot esculenta HOM05D003249 ORTHO05D003626 1.5e-13 80.1 184 39.1
FvH4_6g13640 Fragaria vesca HOM05D003249 ORTHO05D003626 2.0e-13 79.7 184 38.0
FAN14G3579 Fragaria x ananassa HOM05D003249 ORTHO05D003626 2.0e-13 79.7 184 38.0
Ciclev10012089m.g Citrus clementina HOM05D003249 ORTHO05D003626 2.6e-13 79.3 185 40.5
DCAR_017860 Daucus carota HOM05D003249 ORTHO05D003626 5.8e-13 78.2 184 38.0
Dinv35596 Davidia involucrata HOM05D003249 ORTHO05D003626 5.8e-13 78.2 185 37.3
FAN02G4009 Fragaria x ananassa HOM05D003249 ORTHO05D003626 1.3e-12 77.0 190 37.9
FvH4_2g38350 Fragaria vesca HOM05D003249 ORTHO05D003626 1.7e-12 76.6 184 37.5
DCAR_009227 Daucus carota HOM05D003249 ORTHO05D003626 2.9e-12 75.9 190 37.9
TWI53G0245 Tripterygium wilfordii HOM05D003249 ORTHO05D003626 2.9e-12 75.9 194 40.2
arahy.Tifrunner.gnm1.ann1.Z9PFJZ Arachis hypogaea HOM05D003249 ORTHO05D003626 3.8e-12 75.5 191 37.7
unitig_26.g9411 Utricularia gibba HOM05D003249 ORTHO05D003626 3.8e-12 75.5 184 37.0
Prupe.6G255800 Prunus persica HOM05D003249 ORTHO05D003626 4.9e-12 75.1 184 37.5
FAN09G0456 Fragaria x ananassa HOM05D003249 ORTHO05D003626 8.4e-12 74.3 190 38.4
Hma1.2p1_0936F.1_g238715 Hydrangea macrophylla HOM05D003249 ORTHO05D003626 8.4e-12 74.3 186 37.1
arahy.Tifrunner.gnm1.ann1.2DN1X0 Arachis hypogaea HOM05D003249 ORTHO05D003626 1.4e-11 73.6 191 37.2
Cfa017373 Carpinus fangiana HOM05D003249 ORTHO05D003626 1.4e-11 73.6 188 39.4
Haze_20796 Corylus avellana HOM05D003249 ORTHO05D003626 1.4e-11 73.6 186 39.8
Aqoxy4G02897 Aquilegia oxysepala HOM05D003249 ORTHO05D003626 4.2e-11 72.0 187 38.5
MD04G1129500 Malus domestica HOM05D003249 ORTHO05D003626 4.2e-11 72.0 185 36.8
Cc06_g02600 Coffea canephora HOM05D003249 ORTHO05D003626 9.3e-11 70.9 190 38.4
Lj2C94T2 Lonicera japonica HOM05D003249 ORTHO05D003626 9.3e-11 70.9 189 35.4
MSTRG.26777 Avicennia marina HOM05D003249 ORTHO05D003626 1.2e-10 70.5 188 36.2
Eucgr.K03130 Eucalyptus grandis HOM05D003249 ORTHO05D003626 2.1e-10 69.7 185 37.8
TAR369G0046 Trochodendron aralioides HOM05D003249 ORTHO05D003626 2.7e-10 69.3 186 37.6
unitig_749.g13611 Utricularia gibba HOM05D003249 ORTHO05D003626 6.0e-10 68.2 175 36.0
Actinidia05315 Actinidia chinensis HOM05D003249 ORTHO05D003626 7.9e-10 67.8 124 39.5
MD12G1142500 Malus domestica HOM05D003249 ORTHO05D003626 1.3e-09 67.0 185 35.7
MELO3C030739.2 Cucumis melo HOM05D003249 ORTHO05D003626 1.8e-09 66.6 187 38.0
Sabra06G0065400 Salix brachista HOM05D003249 ORTHO05D003626 1.8e-09 66.6 192 34.4
TAR633G2142 Trochodendron aralioides HOM05D003249 ORTHO05D003626 2.3e-09 66.2 169 38.5
CsaV3_3G034870 Cucumis sativus L. HOM05D003249 ORTHO05D003626 3.0e-09 65.9 187 38.0
Sed0011900 Sechium edule HOM05D003249 ORTHO05D003626 3.9e-09 65.5 181 35.4
Potri.006G085900 Populus trichocarpa HOM05D003249 ORTHO05D003626 5.1e-09 65.1 130 35.4
AUR62041017 Chenopodium quinoa HOM05D003249 ORTHO05D003626 8.7e-09 64.3 194 34.5
ClCG10G021170 Citrullus lanatus HOM05D003249 ORTHO05D003626 8.7e-09 64.3 186 37.6
Psat3g139520 Pisum sativum HOM05D003249 ORTHO05D003626 8.7e-09 64.3 185 35.1
Hma1.2p1_1899F.1_g306940 Hydrangea macrophylla HOM05D003249 ORTHO05D003626 1.5e-08 63.5 186 34.9
PSO339G4026 Papaver somniferum HOM05D003249 ORTHO05D003626 1.5e-08 63.5 196 35.2
PGR119G1544 Punica granatum HOM05D003249 ORTHO05D003626 1.9e-08 63.2 188 37.8
Phvul.010G009800 Phaseolus vulgaris HOM05D003249 ORTHO05D003626 3.3e-08 62.4 179 33.0
DCAR_020848 Daucus carota HOM05D003249 ORTHO05D003626 7.4e-08 61.2 155 34.2
Ah.14g085420 Amaranthus hybridus HOM05D003249 ORTHO05D003626 9.6e-08 60.8 194 34.5
CiPaw.09G192900 Carya illinoinensis HOM05D003249 ORTHO05D003626 9.6e-08 60.8 184 34.2
AUR62030471 Chenopodium quinoa HOM05D003249 ORTHO05D003626 1.3e-07 60.5 194 33.5
GSVIVG01034166001 Vitis vinifera HOM05D003249 ORTHO05D003626 1.3e-07 60.5 47 72.3
AUR62025762 Chenopodium quinoa HOM05D003249 ORTHO05D003626 1.6e-07 60.1 195 34.4
Aa31LG5G23120 Aethionema arabicum HOM05D003249 ORTHO05D003626 2.1e-07 59.7 191 35.1
Eucgr.H01113 Eucalyptus grandis HOM05D003249 ORTHO05D003626 2.1e-07 59.7 189 36.0
Sed0010131 Sechium edule HOM05D003249 ORTHO05D003626 2.1e-07 59.7 187 36.4
Ah.09g232000 Amaranthus hybridus HOM05D003249 ORTHO05D003626 2.8e-07 59.3 196 33.7
CSS0015300 Camellia sinensis var. sinensis HOM05D003249 ORTHO05D003626 2.8e-07 59.3 47 70.2
Migut.L01947 Erythranthe guttata HOM05D003249 ORTHO05D003626 4.8e-07 58.5 47 70.2
Ca_07552_v3 Cicer arietinum L. HOM05D003249 ORTHO05D003626 1.1e-06 57.4 185 33.5
AUR62041339 Chenopodium quinoa HOM05D003249 ORTHO05D003626 1.4e-06 57.0 195 33.8
AUR62044763 Chenopodium quinoa HOM05D003249 ORTHO05D003626 1.4e-06 57.0 195 33.8
Rhsim05G0193400 Rhododendron simsii HOM05D003249 ORTHO05D003626 1.4e-06 57.0 174 35.1
Lalb_Chr19g0125311 Lupinus albus HOM05D003249 ORTHO05D003626 2.4e-06 56.2 189 33.3
SalBow4G1476 Salvia bowleyana HOM05D003249 ORTHO05D003626 2.4e-06 56.2 47 66.0
SalBow4G2178 Salvia bowleyana HOM05D003249 ORTHO05D003626 2.4e-06 56.2 47 66.0
Oeu016471.1 Olea europaea HOM05D003249 ORTHO05D003626 3.1e-06 55.8 127 34.6
PGR004G0678 Punica granatum HOM05D003249 ORTHO05D003626 3.1e-06 55.8 47 66.0
Sc20g0004980 Simmondsia chinensis HOM05D003249 ORTHO05D003626 3.1e-06 55.8 183 35.5
PSO384G4328 Papaver somniferum HOM05D003249 ORTHO05D003626 4.0e-06 55.5 196 35.2
vmacro20160 Vaccinium macrocarpon HOM05D003249 ORTHO05D003626 4.0e-06 55.5 174 35.6
EL10Ac5g11590 Beta vulgaris HOM05D003249 ORTHO05D003626 6.9e-06 54.7 194 31.4
CAN.G499.1 Capsicum annuum HOM05D003249 ORTHO05D003626 6.9e-06 54.7 39 76.9


User provided reference genes

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