Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G768.3 Capsicum annuum HOM05D001543 ORTHO05D001722 1.4e-81 306.6 198 100.0
Solyc10g062340.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 2.6e-35 152.9 213 56.3
Peaxi162Scf00103g01116 Petunia axillaris HOM05D001543 ORTHO05D001722 4.1e-33 145.6 205 62.0
Sopen00g003100 Solanum pennellii HOM05D001543 ORTHO05D001722 4.1e-33 145.6 213 52.1
Nitab4.5_0002106g0030 Nicotiana tabacum HOM05D001543 ORTHO05D001722 3.6e-29 132.5 215 57.2
GSVIVG01018314001 Vitis vinifera HOM05D001543 ORTHO05D001722 3.0e-28 129.4 135 70.4
PGSC0003DMG400003492 Solanum tuberosum HOM05D001543 ORTHO05D001722 8.8e-28 127.9 207 55.1
Solyc10g062180.2 Solanum lycopersicum HOM05D001543 ORTHO05D001722 1.5e-27 127.1 202 55.4
Dinv43601 Davidia involucrata HOM05D001543 ORTHO05D001722 3.3e-27 125.9 228 50.9
Peaxi162Scf00853g00434 Petunia axillaris HOM05D001543 ORTHO05D001722 4.4e-27 125.6 208 55.3
PGSC0003DMG400001694 Solanum tuberosum HOM05D001543 ORTHO05D001722 1.3e-26 124.0 219 53.4
PGSC0003DMG400003302 Solanum tuberosum HOM05D001543 ORTHO05D001722 2.8e-26 122.9 218 50.5
PGSC0003DMG400006467 Solanum tuberosum HOM05D001543 ORTHO05D001722 4.5e-24 115.5 130 65.4
Solyc01g088800.4 Solanum lycopersicum HOM05D001543 ORTHO05D001722 1.3e-23 114.0 217 48.8
vmacro21069 Vaccinium macrocarpon HOM05D001543 ORTHO05D001722 8.5e-23 111.3 228 51.3
Nitab4.5_0004425g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 5.5e-22 108.6 216 49.1
Nitab4.5_0000228g0010 Nicotiana tabacum HOM05D001543 ORTHO05D001722 2.1e-21 106.7 215 51.2
Sopen10g026850 Solanum pennellii HOM05D001543 ORTHO05D001722 2.7e-21 106.3 250 40.8
Hma1.2p1_1882F.1_g306400 Hydrangea macrophylla HOM05D001543 ORTHO05D001722 6.1e-21 105.1 257 42.0
CSS0014924 Camellia sinensis var. sinensis HOM05D001543 ORTHO05D001722 8.0e-21 104.8 242 48.3
Glyma.07G119000 Glycine max HOM05D001543 ORTHO05D001722 8.0e-21 104.8 163 46.6
Oeu024403.4 Olea europaea HOM05D001543 ORTHO05D001722 2.0e-19 100.1 226 44.7
SalBow5G2614 Salvia bowleyana HOM05D001543 ORTHO05D001722 2.6e-19 99.8 222 47.3
Glyma.03G107700 Glycine max HOM05D001543 ORTHO05D001722 9.8e-19 97.8 174 47.1
Lalb_Chr12g0210441 Lupinus albus HOM05D001543 ORTHO05D001722 1.1e-17 94.4 218 50.0
SGA_v2.0_scaffold340G49337 Striga asiatica HOM05D001543 ORTHO05D001722 1.1e-17 94.4 223 46.6
Glyma.18G248200 Glycine max HOM05D001543 ORTHO05D001722 4.1e-17 92.4 207 43.5
Gohir.A11G074600 Gossypium hirsutum HOM05D001543 ORTHO05D001722 5.4e-17 92.0 218 36.7
Rhsim01G0141800 Rhododendron simsii HOM05D001543 ORTHO05D001722 5.4e-17 92.0 255 43.9
unitig_22.g5409 Utricularia gibba HOM05D001543 ORTHO05D001722 7.0e-17 91.7 133 47.4
Sopen01g035640 Solanum pennellii HOM05D001543 ORTHO05D001722 1.6e-16 90.5 228 45.6
Cc02_g25380 Coffea canephora HOM05D001543 ORTHO05D001722 2.0e-16 90.1 229 42.4
Manes.05G056900 Manihot esculenta HOM05D001543 ORTHO05D001722 2.0e-16 90.1 137 55.5
Hund17112 Selenicereus undatus HOM05D001543 ORTHO05D001722 1.3e-15 87.4 214 43.9
CiPaw.13G024300 Carya illinoinensis HOM05D001543 ORTHO05D001722 2.2e-15 86.7 233 44.6
TPR.G32125 Trifolium pratense HOM05D001543 ORTHO05D001722 2.9e-15 86.3 223 42.2
Gohir.D11G079300 Gossypium hirsutum HOM05D001543 ORTHO05D001722 6.5e-15 85.1 192 37.5
TAR636G0309 Trochodendron aralioides HOM05D001543 ORTHO05D001722 1.1e-14 84.3 214 47.2
Gorai.007G085100 Gossypium raimondii HOM05D001543 ORTHO05D001722 2.5e-14 83.2 137 40.1
CiPaw.14G018300 Carya illinoinensis HOM05D001543 ORTHO05D001722 9.4e-14 81.3 217 42.4
Lalb_Chr07g0195281 Lupinus albus HOM05D001543 ORTHO05D001722 9.4e-14 81.3 220 43.6
Migut.B01504 Erythranthe guttata HOM05D001543 ORTHO05D001722 1.2e-13 80.9 212 43.9
Gohir.A11G074700 Gossypium hirsutum HOM05D001543 ORTHO05D001722 1.2e-13 80.9 139 44.6
Phvul.010G044700 Phaseolus vulgaris HOM05D001543 ORTHO05D001722 2.1e-13 80.1 157 49.7
VMungo1383G3467 Vigna mungo HOM05D001543 ORTHO05D001722 2.1e-13 80.1 198 44.4
Nitab4.5_0000563g0160 Nicotiana tabacum HOM05D001543 ORTHO05D001722 2.7e-13 79.7 247 39.7
SGA_v2.0_scaffold52G19257 Striga asiatica HOM05D001543 ORTHO05D001722 3.6e-13 79.3 229 38.0
Haze_02878 Corylus avellana HOM05D001543 ORTHO05D001722 1.0e-12 77.8 134 46.3
Oeu018078.2 Olea europaea HOM05D001543 ORTHO05D001722 1.0e-12 77.8 201 44.3
Potri.002G139700 Populus trichocarpa HOM05D001543 ORTHO05D001722 1.4e-12 77.4 136 52.9
THA.LOC104802502 Tarenaya hassleriana HOM05D001543 ORTHO05D001722 1.4e-12 77.4 181 35.4
Ciclev10018944m.g Citrus clementina HOM05D001543 ORTHO05D001722 5.2e-12 75.5 140 50.7
MD07G1096800 Malus domestica HOM05D001543 ORTHO05D001722 5.2e-12 75.5 196 38.3
Atru.chr5.97 Acer truncatum HOM05D001543 ORTHO05D001722 1.5e-11 73.9 205 42.4
CANSAT25G3262 Cannabis sativa HOM05D001543 ORTHO05D001722 2.0e-11 73.6 183 44.8
Lalb_Chr19g0126391 Lupinus albus HOM05D001543 ORTHO05D001722 2.0e-11 73.6 182 39.0
MELO3C006286.2 Cucumis melo HOM05D001543 ORTHO05D001722 5.7e-11 72.0 158 48.7
Sabra14G0036500 Salix brachista HOM05D001543 ORTHO05D001722 5.7e-11 72.0 139 51.8
Sed0010571 Sechium edule HOM05D001543 ORTHO05D001722 5.7e-11 72.0 234 34.6
Sabra14G0038600 Salix brachista HOM05D001543 ORTHO05D001722 7.5e-11 71.6 139 50.4
TWI23G1103 Tripterygium wilfordii HOM05D001543 ORTHO05D001722 7.5e-11 71.6 132 55.3
CsaV3_3G010670 Cucumis sativus L. HOM05D001543 ORTHO05D001722 1.3e-10 70.9 158 48.1
Lj3g0023648 Lotus japonicus HOM05D001543 ORTHO05D001722 1.3e-10 70.9 229 38.4
RcHm_v2.0_Chr1g0345261 Rosa chinensis HOM05D001543 ORTHO05D001722 1.3e-10 70.9 238 41.6
Ah.05g177760 Amaranthus hybridus HOM05D001543 ORTHO05D001722 3.7e-10 69.3 73 58.9
Thhalv10001313m.g Eutrema salsugineum HOM05D001543 ORTHO05D001722 4.9e-10 68.9 218 41.7
MBI04_g38565_MAGBIO Magnolia biondii HOM05D001543 ORTHO05D001722 1.4e-09 67.4 221 43.4
CDE12G0756 Ceratophyllum demersum HOM05D001543 ORTHO05D001722 1.8e-09 67.0 208 39.4
FAN10G3391 Fragaria x ananassa HOM05D001543 ORTHO05D001722 1.6e-08 63.9 229 44.1
Glyma.09G245000 Glycine max HOM05D001543 ORTHO05D001722 2.0e-08 63.5 197 41.1
Sabra02G0108800 Salix brachista HOM05D001543 ORTHO05D001722 2.0e-08 63.5 224 34.8
EL10Ac1g00738 Beta vulgaris HOM05D001543 ORTHO05D001722 3.5e-08 62.8 148 48.6
Lj7A549T58 Lonicera japonica HOM05D001543 ORTHO05D001722 4.5e-08 62.4 125 45.6
QL04p028571 Quercus lobata HOM05D001543 ORTHO05D001722 7.7e-08 61.6 176 42.6
Lj9A553G38 Lonicera japonica HOM05D001543 ORTHO05D001722 1.0e-07 61.2 220 38.6
CDE04G2807 Ceratophyllum demersum HOM05D001543 ORTHO05D001722 2.9e-07 59.7 214 36.9
FAN10G3183 Fragaria x ananassa HOM05D001543 ORTHO05D001722 3.8e-07 59.3 229 45.4
HanXRQChr01g0019921 Helianthus annuus HOM05D001543 ORTHO05D001722 5.0e-07 58.9 227 39.6
Ca_08046_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 6.6e-07 58.5 129 37.2
Ca_08052_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 6.6e-07 58.5 129 37.2
ClCG05G003050 Citrullus lanatus HOM05D001543 ORTHO05D001722 1.1e-06 57.8 241 36.9
Duzib133G1142 Durio zibethinus HOM05D001543 ORTHO05D001722 1.1e-06 57.8 221 32.1
VMungo0331G0452 Vigna mungo HOM05D001543 ORTHO05D001722 1.5e-06 57.4 241 35.3
TAR374G0507 Trochodendron aralioides HOM05D001543 ORTHO05D001722 3.3e-06 56.2 222 36.9
CARHR139930 Cardamine hirsuta HOM05D001543 ORTHO05D001722 4.3e-06 55.8 183 41.0
Aqoxy3G02626 Aquilegia oxysepala HOM05D001543 ORTHO05D001722 5.6e-06 55.5 232 31.0
Cpa.g.sc41.80 Carica papaya HOM05D001543 ORTHO05D001722 5.6e-06 55.5 164 34.8
Ca_02173_v3 Cicer arietinum L. HOM05D001543 ORTHO05D001722 5.6e-06 55.5 47 66.0
Dinv44039 Davidia involucrata HOM05D001543 ORTHO05D001722 9.5e-06 54.7 89 47.2


User provided reference genes

Program Settings