Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G768.2 Capsicum annuum HOM05D006344 ORTHO05D007744 1.3e-182 642.9 317 100.0
Sopen10g011810 Solanum pennellii HOM05D006344 ORTHO05D007744 6.6e-134 481.1 309 80.6
PGSC0003DMG400026373 Solanum tuberosum HOM05D006344 ORTHO05D007744 1.2e-130 470.3 320 78.1
Solyc10g037900.1 Solanum lycopersicum HOM05D006344 ORTHO05D007744 5.7e-130 468.0 311 78.5
Nitab4.5_0000228g0070 Nicotiana tabacum HOM05D006344 ORTHO05D007744 1.4e-115 420.2 314 73.6
Peaxi162Scf00103g00912 Petunia axillaris HOM05D006344 ORTHO05D007744 6.8e-107 391.3 285 72.3
CSS0047635 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 4.5e-90 335.5 333 58.9
SalBow8G3479 Salvia bowleyana HOM05D006344 ORTHO05D007744 6.4e-89 331.6 327 61.2
CSS0005629 Camellia sinensis var. sinensis HOM05D006344 ORTHO05D007744 2.3e-86 323.2 343 56.0
SGA_v2.0_scaffold52G19234 Striga asiatica HOM05D006344 ORTHO05D007744 4.0e-83 312.4 315 57.5
MSTRG.20684 Avicennia marina HOM05D006344 ORTHO05D007744 5.3e-83 312.0 330 55.8
Cc02_g25170 Coffea canephora HOM05D006344 ORTHO05D007744 2.0e-82 310.1 319 54.2
Oeu011251.1 Olea europaea HOM05D006344 ORTHO05D007744 3.4e-82 309.3 326 54.6
Potri.002G138600 Populus trichocarpa HOM05D006344 ORTHO05D007744 1.3e-81 307.4 313 54.3
vmacro13505 Vaccinium macrocarpon HOM05D006344 ORTHO05D007744 1.9e-80 303.5 312 56.1
Migut.B01523 Erythranthe guttata HOM05D006344 ORTHO05D007744 5.5e-80 302.0 322 55.6
Nn1g00813 Nelumbo nucifera HOM05D006344 ORTHO05D007744 4.6e-79 298.9 325 53.5
PSO782G2130 Papaver somniferum HOM05D006344 ORTHO05D007744 3.0e-78 296.2 325 56.0
Cfa011061 Carpinus fangiana HOM05D006344 ORTHO05D007744 9.6e-77 291.2 248 64.1
Sabra02G0107400 Salix brachista HOM05D006344 ORTHO05D007744 1.6e-76 290.4 337 51.0
Aqoxy3G02683 Aquilegia oxysepala HOM05D006344 ORTHO05D007744 2.1e-76 290.0 312 51.9
Haze_02860 Corylus avellana HOM05D006344 ORTHO05D007744 6.2e-76 288.5 284 58.5
Gohir.D12G100600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 6.2e-76 288.5 314 53.5
QL04p029920 Quercus lobata HOM05D006344 ORTHO05D007744 6.2e-76 288.5 250 62.4
Manes.05G055800 Manihot esculenta HOM05D006344 ORTHO05D007744 8.1e-76 288.1 320 54.7
arahy.Tifrunner.gnm1.ann1.7K9T15 Arachis hypogaea HOM05D006344 ORTHO05D007744 1.1e-75 287.7 269 58.7
Duzib138G0679 Durio zibethinus HOM05D006344 ORTHO05D007744 1.1e-75 287.7 256 60.2
EL10Ac1g00751 Beta vulgaris HOM05D006344 ORTHO05D007744 1.4e-75 287.3 294 54.1
Eucgr.D01222 Eucalyptus grandis HOM05D006344 ORTHO05D007744 2.4e-75 286.6 255 62.7
Gohir.A12G097600 Gossypium hirsutum HOM05D006344 ORTHO05D007744 4.0e-75 285.8 324 53.7
arahy.Tifrunner.gnm1.ann1.6KIV37 Arachis hypogaea HOM05D006344 ORTHO05D007744 9.0e-75 284.6 315 52.1
Gorai.008G109500 Gossypium raimondii HOM05D006344 ORTHO05D007744 1.5e-74 283.9 313 52.7
Prupe.2G133500 Prunus persica HOM05D006344 ORTHO05D007744 1.3e-73 280.8 254 60.2
Glyma.12G152700 Glycine max HOM05D006344 ORTHO05D007744 2.2e-73 280.0 250 59.6
TAR375G1150 Trochodendron aralioides HOM05D006344 ORTHO05D007744 3.8e-73 279.3 322 53.1
CANSAT25G2006 Cannabis sativa HOM05D006344 ORTHO05D007744 4.9e-73 278.9 249 63.5
Lalb_Chr12g0210531 Lupinus albus HOM05D006344 ORTHO05D007744 4.9e-73 278.9 249 58.2
TWI23G1150 Tripterygium wilfordii HOM05D006344 ORTHO05D007744 6.5e-73 278.5 316 51.3
AUR62013752 Chenopodium quinoa HOM05D006344 ORTHO05D007744 8.4e-73 278.1 249 59.4
Glyma.06G240000 Glycine max HOM05D006344 ORTHO05D007744 1.1e-72 277.7 247 59.9
MD07G1109900 Malus domestica HOM05D006344 ORTHO05D007744 1.9e-72 276.9 247 60.7
Thecc.01G396400 Theobroma cacao HOM05D006344 ORTHO05D007744 2.5e-72 276.6 318 51.6
VMungo0331G0733 Vigna mungo HOM05D006344 ORTHO05D007744 9.3e-72 274.6 250 58.8
Duzib133G0621 Durio zibethinus HOM05D006344 ORTHO05D007744 1.2e-71 274.2 321 53.0
Thhalv10001417m.g Eutrema salsugineum HOM05D006344 ORTHO05D007744 4.6e-71 272.3 253 60.5
ECA234G3853 Erigeron canadensis HOM05D006344 ORTHO05D007744 7.9e-71 271.6 314 51.6
Phvul.010G046700 Phaseolus vulgaris HOM05D006344 ORTHO05D007744 1.0e-70 271.2 316 50.0
THA.LOC104802498 Tarenaya hassleriana HOM05D006344 ORTHO05D007744 1.3e-70 270.8 336 50.6
unitig_0.g1343 Utricularia gibba HOM05D006344 ORTHO05D007744 2.3e-70 270.0 332 50.6
Hund17097 Selenicereus undatus HOM05D006344 ORTHO05D007744 3.0e-70 269.6 272 55.5
Lsat_1_v5_gn_4_39300 Lactuca sativa HOM05D006344 ORTHO05D007744 3.9e-70 269.2 317 50.2
Rhsim07G0037100 Rhododendron simsii HOM05D006344 ORTHO05D007744 3.9e-70 269.2 318 50.6
CDE06G1994 Ceratophyllum demersum HOM05D006344 ORTHO05D007744 8.7e-70 268.1 253 56.1
AUR62023399 Chenopodium quinoa HOM05D006344 ORTHO05D007744 8.7e-70 268.1 271 54.6
MELO3C005945.2 Cucumis melo HOM05D006344 ORTHO05D007744 8.7e-70 268.1 269 56.5
Ciclev10019814m.g Citrus clementina HOM05D006344 ORTHO05D007744 1.1e-69 267.7 260 55.8
AL4G43840 Arabidopsis lyrata HOM05D006344 ORTHO05D007744 1.9e-69 266.9 323 51.4
A05p04940 Brassica napus HOM05D006344 ORTHO05D007744 1.9e-69 266.9 269 57.6
Sp4g26830 Schrenkiella parvula HOM05D006344 ORTHO05D007744 2.5e-69 266.5 326 50.6
CsaV3_3G007240 Cucumis sativus L. HOM05D006344 ORTHO05D007744 4.3e-69 265.8 269 56.5
Ca_14805_v3 Cicer arietinum L. HOM05D006344 ORTHO05D007744 9.6e-69 264.6 284 52.1
TPR.G32142 Trifolium pratense HOM05D006344 ORTHO05D007744 9.6e-69 264.6 274 54.4
C04p05760 Brassica napus HOM05D006344 ORTHO05D007744 1.6e-68 263.8 269 55.4
Lj3g0017960 Lotus japonicus HOM05D006344 ORTHO05D007744 1.6e-68 263.8 279 53.0
Medtr8g007155 Medicago truncatula HOM05D006344 ORTHO05D007744 1.6e-68 263.8 328 50.9
AT2G44760 Arabidopsis thaliana HOM05D006344 ORTHO05D007744 3.7e-68 262.7 322 50.9
RcHm_v2.0_Chr1g0348081 Rosa chinensis HOM05D006344 ORTHO05D007744 6.3e-68 261.9 247 58.7
Actinidia18353 Actinidia chinensis HOM05D006344 ORTHO05D007744 1.4e-67 260.8 225 61.3
HanXRQChr17g0562521 Helianthus annuus HOM05D006344 ORTHO05D007744 1.8e-67 260.4 248 58.5
Dinv44052 Davidia involucrata HOM05D006344 ORTHO05D007744 2.4e-67 260.0 191 67.5
BraA05t19467Z Brassica rapa HOM05D006344 ORTHO05D007744 5.3e-67 258.8 256 58.2
FvH4_7g10380 Fragaria vesca HOM05D006344 ORTHO05D007744 5.3e-67 258.8 318 50.3
FAN06G2435 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.3e-67 258.8 316 49.7
Sc26g0001660 Simmondsia chinensis HOM05D006344 ORTHO05D007744 9.0e-67 258.1 249 57.4
ATR0665G564 Amborella trichopoda HOM05D006344 ORTHO05D007744 2.0e-66 256.9 272 54.4
FAN06G3766 Fragaria x ananassa HOM05D006344 ORTHO05D007744 2.0e-66 256.9 262 55.3
FAN01G1631 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.4e-66 256.1 310 49.7
CARHR139980 Cardamine hirsuta HOM05D006344 ORTHO05D007744 1.0e-65 254.6 271 52.8
BcaC02g12272 Brassica carinata HOM05D006344 ORTHO05D007744 1.7e-65 253.8 269 53.2
BolC4t22205H Brassica oleracea HOM05D006344 ORTHO05D007744 1.7e-65 253.8 269 53.2
COL.COLO4_10415 Corchorus olitorius HOM05D006344 ORTHO05D007744 2.2e-65 253.4 221 60.6
Psat4g223640 Pisum sativum HOM05D006344 ORTHO05D007744 2.2e-65 253.4 244 56.6
FAN10G0415 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.0e-65 252.3 312 49.0
FAN10G1159 Fragaria x ananassa HOM05D006344 ORTHO05D007744 5.0e-65 252.3 312 49.0
BcaB02g08857 Brassica carinata HOM05D006344 ORTHO05D007744 8.5e-65 251.5 251 57.4
Carub.0004s2733 Capsella rubella HOM05D006344 ORTHO05D007744 3.2e-64 249.6 322 48.8
Cpa.g.sc22.25 Carica papaya HOM05D006344 ORTHO05D007744 3.2e-64 249.6 192 63.5
GSVIVG01018294001 Vitis vinifera HOM05D006344 ORTHO05D007744 7.2e-64 248.4 194 65.5
Aa31LG1G26310 Aethionema arabicum HOM05D006344 ORTHO05D007744 4.6e-63 245.7 352 44.0
Nitab4.5_0009461g0020 Nicotiana tabacum HOM05D006344 ORTHO05D007744 7.9e-63 245.0 147 78.9
Zm00001eb427880 Zea mays HOM05D006344 ORTHO05D007744 1.0e-62 244.6 279 48.4
HPP92_012970 Vanilla planifolia HOM05D006344 ORTHO05D007744 2.5e-61 240.0 269 49.1
Sed0012570 Sechium edule HOM05D006344 ORTHO05D007744 1.6e-60 237.3 261 51.3
FAN03G0097 Fragaria x ananassa HOM05D006344 ORTHO05D007744 3.1e-59 233.0 361 42.9
CiPaw.14G019800 Carya illinoinensis HOM05D006344 ORTHO05D007744 3.4e-58 229.6 253 54.5
DCAR_025059 Daucus carota HOM05D006344 ORTHO05D007744 3.4e-58 229.6 238 52.1
Os04g0545200 Oryza sativa ssp. japonica HOM05D006344 ORTHO05D007744 1.0e-57 228.0 295 43.7
COL.COLO4_12394 Corchorus olitorius HOM05D006344 ORTHO05D007744 1.1e-56 224.6 177 65.0
ClCG05G000130 Citrullus lanatus HOM05D006344 ORTHO05D007744 3.2e-56 223.0 247 54.3
PGR004G1920 Punica granatum HOM05D006344 ORTHO05D007744 8.8e-54 214.9 217 56.2
Atru.chr5.115 Acer truncatum HOM05D006344 ORTHO05D007744 7.9e-47 191.8 215 50.7
SEGI_14599 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 1.3e-36 157.9 183 45.4
Lj9A555T32 Lonicera japonica HOM05D006344 ORTHO05D007744 1.1e-35 154.8 145 62.1
Pp3c5_3810 Physcomitrium patens HOM05D006344 ORTHO05D007744 3.5e-26 123.2 292 30.1
HanXRQChr09g0257941 Helianthus annuus HOM05D006344 ORTHO05D007744 6.5e-25 119.0 110 57.3
SEGI_30390 Sequoiadendron giganteum HOM05D006344 ORTHO05D007744 8.6e-25 118.6 99 55.6
Lj9C555G1 Lonicera japonica HOM05D006344 ORTHO05D007744 2.0e-21 107.5 61 80.3
SMO340G0133 Selaginella moellendorffii HOM05D002542 ORTHO05D007744 2.4e-19 100.5 285 27.0
SMO356G0573 Selaginella moellendorffii HOM05D002542 ORTHO05D005078 3.1e-19 100.1 285 27.0
Peaxi162Scf00562g00611 Petunia axillaris HOM05D006344 ORTHO05D007744 3.5e-18 96.7 94 64.9
AagrBONN_evm.TU.Sc2ySwM_117.1538 Anthoceros agrestis HOM05D006344 ORTHO05D007744 3.8e-17 93.2 118 41.5
Peaxi162Scf00562g00069 Petunia axillaris HOM05D006344 ORTHO05D007744 3.8e-17 93.2 74 64.9
Atru.chr5.116 Acer truncatum HOM05D006344 ORTHO05D007744 1.4e-14 84.7 47 83.0
Mapoly0089s0048 Marchantia polymorpha HOM05D006344 ORTHO05D007744 7.5e-13 79.0 201 31.3
CBR_g48169 Chara braunii HOM05D006344 ORTHO05D007744 4.1e-11 73.2 130 36.2
COL.COLO4_10413 Corchorus olitorius HOM05D006344 ORTHO05D007744 6.6e-09 65.9 76 48.7


User provided reference genes

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