Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G767.49 Capsicum annuum HOM05D031148 ORTHO05D115289 3.3e-80 301.6 145 100.0
CAN.G1910.4 Capsicum annuum HOM05D031148 ORTHO05D115709 1.1e-46 190.3 130 76.2
CAN.G767.54 Capsicum annuum HOM05D031148 ORTHO05D115060 8.4e-36 154.1 80 90.0
CAN.G706.3 Capsicum annuum HOM05D031148 ORTHO05D003413 1.1e-30 137.1 74 89.2
Sopen10g027940 Solanum pennellii HOM05D002560 ORTHO05D003782 4.1e-14 82.0 58 74.1
Solyc10g076270.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 2.0e-13 79.7 58 72.4
Peaxi162Scf00595g00112 Petunia axillaris HOM05D002560 ORTHO05D003782 1.1e-11 73.9 55 67.3
Nitab4.5_0002009g0040 Nicotiana tabacum HOM05D002560 ORTHO05D003782 1.2e-10 70.5 55 67.3
Nitab4.5_0000047g0010 Nicotiana tabacum HOM05D002560 ORTHO05D003782 8.8e-09 64.3 55 60.0
Nitab4.5_0004394g0020 Nicotiana tabacum HOM05D002560 ORTHO05D003782 8.8e-09 64.3 55 60.0
Solyc09g014780.3 Solanum lycopersicum HOM05D002560 ORTHO05D003782 8.8e-09 64.3 55 60.0
Sopen09g007660 Solanum pennellii HOM05D002560 ORTHO05D003782 8.8e-09 64.3 55 60.0
PGSC0003DMG400017035 Solanum tuberosum HOM05D002560 ORTHO05D003782 8.8e-09 64.3 55 60.0
MSTRG.5523 Avicennia marina HOM05D002560 ORTHO05D003782 1.5e-08 63.5 61 52.5
Actinidia29053 Actinidia chinensis HOM05D002560 ORTHO05D003782 2.5e-08 62.8 58 58.6
vmacro08922 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 4.3e-08 62.0 59 55.9
Sabra06G0083000 Salix brachista HOM05D002560 ORTHO05D003782 7.4e-08 61.2 56 58.9
CSS0041781 Camellia sinensis var. sinensis HOM05D002560 ORTHO05D003782 2.8e-07 59.3 60 53.3
Manes.08G174400 Manihot esculenta HOM05D002560 ORTHO05D003782 2.8e-07 59.3 59 57.6
Peaxi162Scf00744g00021 Petunia axillaris HOM05D002560 ORTHO05D003782 2.8e-07 59.3 55 54.5
CAN.G1189.1 Capsicum annuum HOM05D002560 ORTHO05D003782 3.7e-07 58.9 55 56.4
CAN.G133.1 Capsicum annuum HOM05D002560 ORTHO05D003782 3.7e-07 58.9 55 56.4
MD04G1169600 Malus domestica HOM05D002560 ORTHO05D003782 3.7e-07 58.9 62 50.0
Actinidia11535 Actinidia chinensis HOM05D002560 ORTHO05D003782 4.8e-07 58.5 58 56.9
Phvul.008G088100 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 4.8e-07 58.5 58 56.9
Cpa.g.sc86.8 Carica papaya HOM05D002560 ORTHO05D003782 1.1e-06 57.4 63 49.2
Dinv25295 Davidia involucrata HOM05D002560 ORTHO05D003782 1.1e-06 57.4 61 50.8
MD12G1183600 Malus domestica HOM05D002560 ORTHO05D003782 1.1e-06 57.4 62 50.0
CiPaw.09G217200 Carya illinoinensis HOM05D002560 ORTHO05D003782 1.4e-06 57.0 61 50.8
DCAR_015351 Daucus carota HOM05D002560 ORTHO05D003782 1.4e-06 57.0 60 53.3
Phvul.008G087800 Phaseolus vulgaris HOM05D002560 ORTHO05D003782 1.4e-06 57.0 58 55.2
Sed0022812 Sechium edule HOM05D002560 ORTHO05D003782 1.4e-06 57.0 62 51.6
Duzib212G0261 Durio zibethinus HOM05D002560 ORTHO05D003782 1.8e-06 56.6 62 54.8
vmacro20346 Vaccinium macrocarpon HOM05D002560 ORTHO05D003782 1.8e-06 56.6 58 53.4
FAN02G0292 Fragaria x ananassa HOM05D002560 ORTHO05D003782 2.4e-06 56.2 62 50.0
FAN09G2734 Fragaria x ananassa HOM05D002560 ORTHO05D003782 2.4e-06 56.2 62 50.0
TWI77G0423 Tripterygium wilfordii HOM05D002560 ORTHO05D003782 2.4e-06 56.2 61 50.8
Lalb_Chr01g0023591 Lupinus albus HOM05D002560 ORTHO05D003782 3.1e-06 55.8 57 54.4
Manes.09G114600 Manihot esculenta HOM05D002560 ORTHO05D003782 3.1e-06 55.8 61 47.5
Rhsim05G0228200 Rhododendron simsii HOM05D002560 ORTHO05D003782 3.1e-06 55.8 58 48.3
CsaV3_4G026950 Cucumis sativus L. HOM05D002560 ORTHO05D003782 4.1e-06 55.5 62 48.4
Potri.006G106600 Populus trichocarpa HOM05D002560 ORTHO05D003782 4.1e-06 55.5 54 55.6
QL07p033277 Quercus lobata HOM05D002560 ORTHO05D003782 4.1e-06 55.5 62 48.4
VMungo1383G3009 Vigna mungo HOM05D002560 ORTHO05D003782 4.1e-06 55.5 58 53.4
Actinidia32554 Actinidia chinensis HOM05D002560 ORTHO05D003782 5.3e-06 55.1 64 50.0
Ciclev10010918m.g Citrus clementina HOM05D002560 ORTHO05D003782 5.3e-06 55.1 62 50.0
FAN05G0561 Fragaria x ananassa HOM05D002560 ORTHO05D003782 5.3e-06 55.1 62 48.4
Gohir.A10G147600 Gossypium hirsutum HOM05D002560 ORTHO05D003782 5.3e-06 55.1 62 48.4
Gohir.D10G118500 Gossypium hirsutum HOM05D002560 ORTHO05D003782 5.3e-06 55.1 62 48.4
Rhsim04G0123300 Rhododendron simsii HOM05D002560 ORTHO05D003782 5.3e-06 55.1 59 50.8
Thecc.04G156800 Theobroma cacao HOM05D002560 ORTHO05D003782 5.3e-06 55.1 61 50.8
ECA247G0799 Erigeron canadensis HOM05D002560 ORTHO05D003782 6.9e-06 54.7 69 44.9
FAN05G5301 Fragaria x ananassa HOM05D002560 ORTHO05D003782 6.9e-06 54.7 62 48.4
Gorai.011G130300 Gossypium raimondii HOM05D002560 ORTHO05D003782 6.9e-06 54.7 62 48.4
Sabra04G0150100 Salix brachista HOM05D002560 ORTHO05D003782 6.9e-06 54.7 61 49.2
CiPaw.10G163200 Carya illinoinensis HOM05D002560 ORTHO05D003782 9.1e-06 54.3 62 45.2
MELO3C027407.2 Cucumis melo HOM05D002560 ORTHO05D003782 9.1e-06 54.3 62 46.8
FvH4_6g10400 Fragaria vesca HOM05D002560 ORTHO05D003782 9.1e-06 54.3 62 48.4
FAN14G2820 Fragaria x ananassa HOM05D002560 ORTHO05D003782 9.1e-06 54.3 62 48.4
TPR.G35288 Trifolium pratense HOM05D002560 ORTHO05D003782 9.1e-06 54.3 54 51.9


User provided reference genes

Program Settings