Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G767.41 Capsicum annuum HOM05D000595 ORTHO05D008454 1.5e-264 915.6 442 100.0
Solyc12g098360.2 Solanum lycopersicum HOM05D000595 ORTHO05D008454 9.5e-248 859.8 447 93.5
Sopen12g033140 Solanum pennellii HOM05D000595 ORTHO05D008454 2.1e-247 858.6 447 93.3
Nitab4.5_0000676g0200 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.3e-240 834.3 445 90.6
Nitab4.5_0000850g0080 Nicotiana tabacum HOM05D000595 ORTHO05D008454 4.0e-238 827.8 455 88.6
Nitab4.5_0005206g0070 Nicotiana tabacum HOM05D000595 ORTHO05D008454 7.5e-237 823.5 464 87.1
Peaxi162Scf00652g00421 Petunia axillaris HOM05D000595 ORTHO05D008454 7.5e-229 797.0 452 85.4
RcHm_v2.0_Chr4g0415411 Rosa chinensis HOM05D000595 ORTHO05D008454 1.3e-199 699.9 445 76.0
Dinv29591 Davidia involucrata HOM05D000595 ORTHO05D008454 3.1e-198 695.3 443 77.0
Prupe.1G006900 Prunus persica HOM05D000595 ORTHO05D008454 5.8e-197 691.0 441 75.7
Cc03_g07770 Coffea canephora HOM05D000595 ORTHO05D008454 9.9e-197 690.3 453 73.5
THA.LOC104801033 Tarenaya hassleriana HOM05D000595 ORTHO05D008454 4.9e-196 688.0 416 77.4
TWI53G1083 Tripterygium wilfordii HOM05D000595 ORTHO05D008454 8.4e-196 687.2 445 74.4
MD04G1008200 Malus domestica HOM05D000595 ORTHO05D008454 1.1e-195 686.8 436 76.1
Thecc.04G204800 Theobroma cacao HOM05D000595 ORTHO05D008454 1.4e-195 686.4 436 75.7
FvH4_4g15840 Fragaria vesca HOM05D000595 ORTHO05D008454 2.4e-195 685.6 434 75.3
Sed0004774 Sechium edule HOM05D000595 ORTHO05D008454 9.3e-195 683.7 444 73.6
Gorai.011G158900 Gossypium raimondii HOM05D000595 ORTHO05D008454 2.7e-194 682.2 444 74.1
PGR083G2732 Punica granatum HOM05D000595 ORTHO05D008454 4.6e-194 681.4 434 74.9
Duzib151G0403 Durio zibethinus HOM05D000595 ORTHO05D008454 7.9e-194 680.6 436 75.5
A10p03330 Brassica napus HOM05D000595 ORTHO05D008454 1.8e-193 679.5 422 75.8
BraA10t42609Z Brassica rapa HOM05D000595 ORTHO05D008454 1.8e-193 679.5 422 75.8
Nn1g07860 Nelumbo nucifera HOM05D000595 ORTHO05D008454 1.8e-193 679.5 439 74.7
PSO017G5401 Papaver somniferum HOM05D000595 ORTHO05D008454 5.1e-193 677.9 424 75.9
arahy.Tifrunner.gnm1.ann1.897VZR Arachis hypogaea HOM05D000595 ORTHO05D008454 6.7e-193 677.6 427 75.9
Carub.0001s0414 Capsella rubella HOM05D000595 ORTHO05D008454 6.7e-193 677.6 438 74.7
PSO063G0672 Papaver somniferum HOM05D000595 ORTHO05D008454 6.7e-193 677.6 444 73.6
arahy.Tifrunner.gnm1.ann1.G7HRZN Arachis hypogaea HOM05D000595 ORTHO05D008454 1.5e-192 676.4 427 75.9
BolC5t29087H Brassica oleracea HOM05D000595 ORTHO05D008454 1.9e-192 676.0 417 77.2
Potri.001G314700 Populus trichocarpa HOM05D000595 ORTHO05D008454 1.9e-192 676.0 412 77.2
CSS0010328 Camellia sinensis var. sinensis HOM05D000595 ORTHO05D008454 2.5e-192 675.6 436 74.3
HanXRQChr07g0185731 Helianthus annuus HOM05D000595 ORTHO05D008454 3.3e-192 675.2 423 75.9
AL1G14620 Arabidopsis lyrata HOM05D000595 ORTHO05D008454 4.3e-192 674.9 441 73.7
Thhalv10007628m.g Eutrema salsugineum HOM05D000595 ORTHO05D008454 4.3e-192 674.9 416 76.9
AT1G04900 Arabidopsis thaliana HOM05D000595 ORTHO05D008454 1.3e-191 673.3 416 77.2
C05p03050 Brassica napus HOM05D000595 ORTHO05D008454 1.3e-191 673.3 424 76.2
CsaV3_1G042950 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.6e-191 672.9 444 73.9
Sc13g0000130 Simmondsia chinensis HOM05D000595 ORTHO05D008454 1.6e-191 672.9 420 75.2
Psat1g165160 Pisum sativum HOM05D000595 ORTHO05D008454 2.8e-191 672.2 434 72.8
Atru.chr4.1710 Acer truncatum HOM05D000595 ORTHO05D008454 3.7e-191 671.8 444 74.3
FAN12G2005 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.1e-191 670.6 411 76.9
Aa31LG1G19900 Aethionema arabicum HOM05D000595 ORTHO05D008454 1.1e-190 670.2 436 74.1
TAR636G3484 Trochodendron aralioides HOM05D000595 ORTHO05D008454 2.4e-190 669.1 436 74.8
Glyma.15G133500 Glycine max HOM05D000595 ORTHO05D008454 3.1e-190 668.7 420 75.7
TPR.G22264 Trifolium pratense HOM05D000595 ORTHO05D008454 4.0e-190 668.3 422 74.2
Migut.N00379 Erythranthe guttata HOM05D000595 ORTHO05D008454 9.0e-190 667.2 448 72.8
Lj6g0010121 Lotus japonicus HOM05D000595 ORTHO05D008454 1.2e-189 666.8 421 75.5
VMungo0540G0041 Vigna mungo HOM05D000595 ORTHO05D001274 2.6e-189 665.6 445 70.8
Eucgr.H02785 Eucalyptus grandis HOM05D000595 ORTHO05D008454 4.5e-189 664.8 420 75.0
Ca_00886_v3 Cicer arietinum L. HOM05D000595 ORTHO05D001274 1.7e-188 662.9 423 73.8
Lalb_Chr15g0088911 Lupinus albus HOM05D000595 ORTHO05D008454 1.7e-188 662.9 439 72.2
Lj6C558G7 Lonicera japonica HOM05D000595 ORTHO05D008454 2.2e-188 662.5 419 76.1
ClCG05G003330 Citrullus lanatus HOM05D000595 ORTHO05D008454 3.5e-186 655.2 422 74.9
Phvul.006G125200 Phaseolus vulgaris HOM05D000595 ORTHO05D008454 1.3e-185 653.3 420 74.0
Gohir.A10G123700 Gossypium hirsutum HOM05D000595 ORTHO05D008454 2.5e-184 649.0 444 71.2
Sabra16G0199100 Salix brachista HOM05D000595 ORTHO05D008454 4.8e-183 644.8 476 67.9
MELO3C015176.2 Cucumis melo HOM05D000595 ORTHO05D008454 2.4e-182 642.5 475 68.6
Aqoxy2G03878 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 3.1e-182 642.1 425 73.4
Actinidia37010 Actinidia chinensis HOM05D000595 ORTHO05D008454 8.2e-175 617.5 389 76.1
Rhsim09G0055700 Rhododendron simsii HOM05D000595 ORTHO05D008454 8.2e-175 617.5 590 57.5
CARHR004300 Cardamine hirsuta HOM05D000595 ORTHO05D008454 6.9e-174 614.4 416 71.6
COL.COLO4_09879 Corchorus olitorius HOM05D000595 ORTHO05D008454 3.4e-173 612.1 368 78.3
vmacro00479 Vaccinium macrocarpon HOM05D000595 ORTHO05D008454 3.4e-173 612.1 561 59.5
EL10Ac3g07487 Beta vulgaris HOM05D000595 ORTHO05D008454 3.8e-172 608.6 422 70.4
Os01g0911900 Oryza sativa ssp. japonica HOM05D000595 ORTHO05D008454 6.1e-170 601.3 429 67.6
FAN07G1333 Fragaria x ananassa HOM05D000595 ORTHO05D008454 8.8e-169 597.4 431 69.1
Ah.13g078130 Amaranthus hybridus HOM05D000595 ORTHO05D008454 2.5e-168 595.9 407 71.5
Ciclev10005247m.g Citrus clementina HOM05D000595 ORTHO05D008454 3.3e-168 595.5 362 77.6
ECA233G5324 Erigeron canadensis HOM05D000595 ORTHO05D008454 1.3e-167 593.6 378 75.4
Gohir.D10G142300 Gossypium hirsutum HOM05D000595 ORTHO05D008454 1.7e-167 593.2 361 77.6
HPP92_008949 Vanilla planifolia HOM05D000595 ORTHO05D008454 1.4e-166 590.1 418 66.7
ATR1145G018 Amborella trichopoda HOM05D000595 ORTHO05D008454 2.2e-164 582.8 408 67.9
FAN19G1967 Fragaria x ananassa HOM05D000595 ORTHO05D008454 3.8e-164 582.0 434 66.8
Lsat_1_v5_gn_6_60501 Lactuca sativa HOM05D000595 ORTHO05D008454 8.5e-164 580.9 385 71.4
DCAR_002262 Daucus carota HOM05D000595 ORTHO05D008454 3.3e-152 542.3 359 74.4
Haze_11606 Corylus avellana HOM05D000595 ORTHO05D008454 7.4e-152 541.2 388 69.8
Sp1g03740 Schrenkiella parvula HOM05D000595 ORTHO05D008454 4.2e-147 525.4 390 67.4
GSVIVG01000528001 Vitis vinifera HOM05D000595 ORTHO05D008454 3.6e-146 522.3 382 68.1
AUR62020816 Chenopodium quinoa HOM05D000595 ORTHO05D008454 6.1e-146 521.5 376 67.8
Manes.15G053200 Manihot esculenta HOM05D000595 ORTHO05D008454 3.0e-145 519.2 336 74.1
Medtr2g031240 Medicago truncatula HOM05D000595 ORTHO05D008454 6.8e-145 518.1 343 71.1
QL06p024408 Quercus lobata HOM05D000595 ORTHO05D008454 1.2e-141 507.3 320 76.2
SGA_v2.0_scaffold216G42389 Striga asiatica HOM05D000595 ORTHO05D008454 4.5e-141 505.4 338 72.8
Lj6A570G15 Lonicera japonica HOM05D000595 ORTHO05D008454 5.2e-137 491.9 425 60.7
AUR62032918 Chenopodium quinoa HOM05D000595 ORTHO05D008454 9.2e-126 454.5 371 62.0
CiPaw.01G121900 Carya illinoinensis HOM05D000595 ORTHO05D008454 2.8e-122 443.0 285 75.8
Mapoly0090s0077 Marchantia polymorpha HOM05D000595 ORTHO05D008454 2.2e-119 433.3 408 52.5
AagrBONN_evm.TU.Sc2ySwM_344.3272 Anthoceros agrestis HOM05D000595 ORTHO05D008454 5.6e-115 418.7 419 49.6
Pp3c9_4240 Physcomitrium patens HOM05D000595 ORTHO05D008454 4.7e-114 415.6 400 49.8
SMO367G0911 Selaginella moellendorffii HOM05D000595 ORTHO05D008454 2.0e-112 410.2 406 49.8
unitig_744.g24024 Utricularia gibba HOM05D000595 ORTHO05D008454 3.4e-112 409.5 315 63.2
Cpa.g.sc59.134 Carica papaya HOM05D000595 ORTHO05D008454 7.3e-99 365.2 234 74.4
Zm00001eb143660 Zea mays HOM05D000595 ORTHO05D008454 1.3e-90 337.8 224 69.2
FvH4_1g23291 Fragaria vesca HOM05D000595 ORTHO05D008454 1.3e-82 311.2 206 74.3
SEGI_10928 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.1e-81 308.1 230 65.7
MCO01G355 Micromonas commoda HOM05D000595 ORTHO05D008454 2.1e-66 257.3 430 37.9
Actinidia33191 Actinidia chinensis HOM05D000595 ORTHO05D008454 4.6e-61 239.6 189 66.7
PRCOL_00005088 Prasinoderma coloniale HOM05D000595 ORTHO05D008454 1.3e-60 238.0 406 35.7
CiPaw.01G121800 Carya illinoinensis HOM05D000595 ORTHO05D008454 1.9e-59 234.2 137 77.4
FAN17G1124 Fragaria x ananassa HOM05D000595 ORTHO05D008454 7.7e-56 222.2 130 83.1
Oeu016734.1 Olea europaea HOM05D000595 ORTHO05D008454 1.0e-47 195.3 225 50.7
Cre13.g584700 Chlamydomonas reinhardtii HOM05D000595 ORTHO05D008454 2.0e-43 181.0 411 29.2
CBR_g19088 Chara braunii HOM05D000019 ORTHO05D000048 3.7e-42 176.8 177 49.2
Cfa022406 Carpinus fangiana HOM05D000595 ORTHO05D008454 5.9e-40 169.5 427 29.7
QL06p024418 Quercus lobata HOM05D000595 ORTHO05D008454 1.8e-36 157.9 133 59.4
GSVIVG01000526001 Vitis vinifera HOM05D000595 ORTHO05D008454 3.7e-34 150.2 89 77.5
CsaV3_6G039270 Cucumis sativus L. HOM05D000595 ORTHO05D008454 3.1e-33 147.1 89 77.5
EL10Ac4g09027 Beta vulgaris HOM05D000595 ORTHO05D008454 2.1e-29 134.4 114 57.0
AagrBONN_evm.TU.Sc2ySwM_368.462 Anthoceros agrestis HOM05D000595 ORTHO05D006346 4.8e-26 123.2 122 49.2
CsaV3_6G039250 Cucumis sativus L. HOM05D000595 ORTHO05D008454 1.1e-22 112.1 72 73.6
Nn1g07859 Nelumbo nucifera HOM05D000595 ORTHO05D008454 4.7e-21 106.7 84 66.7
unitig_744.g24023 Utricularia gibba HOM05D000595 ORTHO05D008454 2.0e-19 101.3 65 73.8
AUR62032919 Chenopodium quinoa HOM05D000595 ORTHO05D008454 2.0e-16 91.3 45 88.9
SEGI_41312 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.3e-15 88.6 97 45.4
CDE09G0179 Ceratophyllum demersum HOM05D000595 ORTHO05D008454 4.7e-13 80.1 72 54.2
Aqoxy3G00773 Aquilegia oxysepala HOM05D000595 ORTHO05D008454 9.2e-09 65.9 33 75.8
SEGI_06009 Sequoiadendron giganteum HOM05D000595 ORTHO05D008454 1.2e-08 65.5 62 50.0
Actinidia33192 Actinidia chinensis HOM05D000595 ORTHO05D008454 1.1e-06 58.9 35 77.1
A03p03910 Brassica napus HOM05D036078 ORTHO05D008454 1.1e-06 58.9 37 75.7
C03p02090 Brassica napus HOM05D036078 ORTHO05D008454 1.1e-06 58.9 37 75.7


User provided reference genes

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