Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CAN.G765.5 Capsicum annuum HOM05D004843 ORTHO05D005833 0.0e+00 1270.4 629 100.0
Solyc12g014090.2 Solanum lycopersicum HOM05D004843 ORTHO05D005833 1.1e-302 1042.7 629 82.7
Sopen12g005870 Solanum pennellii HOM05D004843 ORTHO05D005833 1.6e-301 1038.9 629 82.2
Nitab4.5_0007508g0020 Nicotiana tabacum HOM05D004843 ORTHO05D005833 3.9e-295 1017.7 629 80.3
Nitab4.5_0003077g0040 Nicotiana tabacum HOM05D004843 ORTHO05D005833 2.7e-280 968.4 628 77.5
Peaxi162Scf00000g02614 Petunia axillaris HOM05D004843 ORTHO05D005833 2.7e-216 755.7 624 64.3
Oeu024378.1 Olea europaea HOM05D004843 ORTHO05D005833 4.3e-193 678.7 624 57.5
MSTRG.12883 Avicennia marina HOM05D004843 ORTHO05D005833 4.4e-174 615.5 612 54.4
Cc05_g11520 Coffea canephora HOM05D004843 ORTHO05D005833 1.2e-171 607.4 617 53.5
Lj1C835G2 Lonicera japonica HOM05D004843 ORTHO05D005833 1.2e-168 597.4 593 54.6
Oeu061997.2 Olea europaea HOM05D004843 ORTHO05D005833 7.6e-158 561.6 620 51.3
Actinidia35229 Actinidia chinensis HOM05D004843 ORTHO05D005833 9.9e-158 561.2 630 48.6
Oeu061325.2 Olea europaea HOM05D004843 ORTHO05D005833 2.2e-157 560.1 523 57.2
SGA_v2.0_scaffold70G23704 Striga asiatica HOM05D004843 ORTHO05D005833 2.3e-154 550.1 626 49.7
Dinv20222 Davidia involucrata HOM05D004843 ORTHO05D005833 3.3e-153 546.2 585 50.3
CSS0025192 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 9.6e-153 544.7 636 46.7
CiPaw.08G115600 Carya illinoinensis HOM05D004843 ORTHO05D005833 5.3e-151 538.9 593 49.2
Hma1.2p1_0416F.1_g148560 Hydrangea macrophylla HOM05D004843 ORTHO05D005833 1.5e-150 537.3 629 46.6
GSVIVG01014249001 Vitis vinifera HOM05D004843 ORTHO05D005833 2.6e-150 536.6 628 46.8
Cfa019615 Carpinus fangiana HOM05D004843 ORTHO05D005833 3.1e-143 513.1 593 46.4
Rhsim04G0023600 Rhododendron simsii HOM05D004843 ORTHO05D005833 1.2e-139 501.1 713 41.8
vmacro09509 Vaccinium macrocarpon HOM05D004843 ORTHO05D005833 1.2e-139 501.1 668 44.0
TAR627G0485 Trochodendron aralioides HOM05D004843 ORTHO05D005833 3.5e-139 499.6 564 47.9
QL11p026708 Quercus lobata HOM05D004843 ORTHO05D005833 2.1e-136 490.3 676 41.7
DCAR_021007 Daucus carota HOM05D004843 ORTHO05D005833 1.4e-135 487.6 614 45.1
Lsat_1_v5_gn_5_128660 Lactuca sativa HOM05D004843 ORTHO05D005833 3.8e-133 479.6 627 45.1
TWI38G0787 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 4.9e-133 479.2 594 45.1
Lj3g0014260 Lotus japonicus HOM05D004843 ORTHO05D005833 6.7e-130 468.8 621 44.1
Sed0025158 Sechium edule HOM05D004843 ORTHO05D005833 2.5e-129 466.8 611 43.2
PGR031G2553 Punica granatum HOM05D004843 ORTHO05D005833 4.3e-129 466.1 603 42.5
Migut.H01969 Erythranthe guttata HOM05D004843 ORTHO05D005833 4.8e-128 462.6 608 44.2
Nn1g06340 Nelumbo nucifera HOM05D004843 ORTHO05D005833 1.4e-127 461.1 630 41.3
Glyma.12G227600 Glycine max HOM05D004843 ORTHO05D005833 3.1e-127 459.9 591 43.7
Glyma.13G272600 Glycine max HOM05D004843 ORTHO05D005833 1.5e-126 457.6 614 42.8
MELO3C016086.2 Cucumis melo HOM05D004843 ORTHO05D005833 1.4e-124 451.1 612 41.8
SalBow7G4166 Salvia bowleyana HOM05D004843 ORTHO05D005833 1.2e-123 448.0 507 48.7
CsaV3_4G008440 Cucumis sativus L. HOM05D004843 ORTHO05D005833 6.7e-122 442.2 613 41.8
Prupe.4G172200 Prunus persica HOM05D004843 ORTHO05D005833 1.9e-121 440.7 627 41.1
Ciclev10019192m.g Citrus clementina HOM05D004843 ORTHO05D005833 2.5e-121 440.3 598 41.8
Lj1g0026777 Lotus japonicus HOM05D004843 ORTHO05D005833 5.7e-121 439.1 598 41.1
RcHm_v2.0_Chr6g0312691 Rosa chinensis HOM05D004843 ORTHO05D005833 6.3e-120 435.6 630 42.2
ClCG07G009890 Citrullus lanatus HOM05D004843 ORTHO05D005833 1.4e-119 434.5 610 40.5
Phvul.005G067200 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 1.4e-119 434.5 625 40.2
RcHm_v2.0_Chr5g0031851 Rosa chinensis HOM05D004843 ORTHO05D005833 3.1e-119 433.3 657 40.8
VMungo1080G1831 Vigna mungo HOM05D004843 ORTHO05D005833 6.9e-119 432.2 627 40.4
Manes.15G090500 Manihot esculenta HOM05D004843 ORTHO05D005833 1.5e-118 431.0 643 41.2
Potri.012G106300 Populus trichocarpa HOM05D004843 ORTHO05D005833 5.9e-118 429.1 643 40.6
FvH4_3g19060 Fragaria vesca HOM05D004843 ORTHO05D005833 2.5e-116 423.7 616 42.0
MD10G1064700 Malus domestica HOM05D004843 ORTHO05D005833 4.2e-116 422.9 596 42.3
DCAR_031588 Daucus carota HOM05D004843 ORTHO05D005833 5.5e-116 422.5 548 43.8
HanXRQChr10g0302381 Helianthus annuus HOM05D004843 ORTHO05D005833 7.2e-116 422.2 626 42.3
Eucgr.F03287 Eucalyptus grandis HOM05D004843 ORTHO05D005833 1.2e-115 421.4 622 41.8
FAN25G1696 Fragaria x ananassa HOM05D004843 ORTHO05D005833 1.2e-115 421.4 616 42.0
Duzib268G0207 Durio zibethinus HOM05D004843 ORTHO05D005833 1.6e-115 421.0 596 43.5
Psat5g240000 Pisum sativum HOM05D004843 ORTHO05D005833 3.6e-115 419.9 626 40.4
MD03G1237200 Malus domestica HOM05D004843 ORTHO05D005833 2.6e-113 413.7 608 41.1
TPR.G29644 Trifolium pratense HOM05D004843 ORTHO05D005833 5.7e-113 412.5 632 42.1
Cpa.g.sc131.81 Carica papaya HOM05D004843 ORTHO05D005833 7.4e-113 412.1 581 42.3
Lalb_Chr25g0286141 Lupinus albus HOM05D004843 ORTHO05D005833 2.8e-112 410.2 622 39.9
SalBow7G4326 Salvia bowleyana HOM05D004843 ORTHO05D005833 3.1e-111 406.8 483 47.2
Aqoxy4G00544 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.2e-110 404.8 547 41.0
Gohir.A04G036900 Gossypium hirsutum HOM05D004843 ORTHO05D005833 7.7e-110 402.1 592 42.4
Sabra12G0078800 Salix brachista HOM05D004843 ORTHO05D005833 1.3e-109 401.4 696 36.8
EL10Ac4g08285 Beta vulgaris HOM05D004843 ORTHO05D005833 1.4e-108 397.9 601 41.6
Gohir.D05G347266 Gossypium hirsutum HOM05D004843 ORTHO05D005833 3.2e-108 396.7 585 41.7
Gorai.009G374700 Gossypium raimondii HOM05D004843 ORTHO05D005833 3.2e-108 396.7 586 42.3
arahy.Tifrunner.gnm1.ann1.60B7R0 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.6e-107 394.4 616 38.0
CAN.G349.3 Capsicum annuum HOM05D004843 ORTHO05D005833 1.1e-105 388.3 268 75.0
FAN11G0804 Fragaria x ananassa HOM05D004843 ORTHO05D005833 5.7e-105 386.0 616 40.1
AUR62036128 Chenopodium quinoa HOM05D004843 ORTHO05D005833 7.4e-105 385.6 625 39.4
CSS0012812 Camellia sinensis var. sinensis HOM05D004843 ORTHO05D005833 1.8e-103 380.9 440 47.7
arahy.Tifrunner.gnm1.ann1.G1PXE9 Arachis hypogaea HOM05D004843 ORTHO05D005833 1.2e-102 378.3 581 39.1
Medtr2g078390 Medicago truncatula HOM05D004843 ORTHO05D005833 5.9e-102 375.9 646 37.6
Sc03g0010280 Simmondsia chinensis HOM05D004843 ORTHO05D005833 1.1e-95 355.1 599 39.2
CiPaw.11G165700 Carya illinoinensis HOM05D004843 ORTHO05D005833 1.2e-89 335.1 607 37.6
AUR62026744 Chenopodium quinoa HOM05D004843 ORTHO05D005833 2.6e-89 334.0 507 42.2
AUR62019511 Chenopodium quinoa HOM05D004843 ORTHO05D005833 5.7e-89 332.8 540 41.5
Glyma.13G009900 Glycine max HOM05D004843 ORTHO05D005833 8.3e-88 328.9 506 37.5
Hund13862 Selenicereus undatus HOM05D004843 ORTHO05D005833 9.1e-87 325.5 704 33.8
PSO210G0781 Papaver somniferum HOM05D004843 ORTHO05D005833 8.6e-85 318.9 574 36.8
THA.LOC104798752 Tarenaya hassleriana HOM05D004843 ORTHO05D005833 7.2e-84 315.8 623 35.8
PSO832G1805 Papaver somniferum HOM05D004843 ORTHO05D005833 1.6e-83 314.7 581 37.2
Haze_09370 Corylus avellana HOM05D004843 ORTHO05D005833 1.2e-81 308.5 418 42.8
Phvul.005G068700 Phaseolus vulgaris HOM05D004843 ORTHO05D005833 4.3e-76 290.0 466 36.7
unitig_26.g10042 Utricularia gibba HOM05D004843 ORTHO05D005833 7.3e-76 289.3 453 41.5
Zm00001eb280030 Zea mays HOM05D004843 ORTHO05D005833 9.8e-73 278.9 544 34.0
Os06g0244100 Oryza sativa ssp. japonica HOM05D004843 ORTHO05D005833 4.9e-72 276.6 575 34.1
ATR0165G025 Amborella trichopoda HOM05D004843 ORTHO05D005833 8.3e-72 275.8 577 34.5
Oeu018948.1 Olea europaea HOM05D004843 ORTHO05D005833 1.6e-70 271.6 298 52.0
Aa31LG6G6390 Aethionema arabicum HOM05D000944 ORTHO05D003581 1.0e-69 268.9 613 31.3
CARHR043430 Cardamine hirsuta HOM05D004843 ORTHO05D005833 1.5e-68 265.0 638 32.3
CDE10G0946 Ceratophyllum demersum HOM05D004843 ORTHO05D005833 3.1e-66 257.3 441 37.2
TWI31G0686 Tripterygium wilfordii HOM05D004843 ORTHO05D005833 1.5e-65 255.0 548 33.4
ECA234G3172 Erigeron canadensis HOM05D004843 ORTHO05D005833 9.8e-65 252.3 334 44.0
Carub.0001s4239 Capsella rubella HOM05D004843 ORTHO05D005833 2.9e-64 250.8 633 31.8
Ca_15018_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 3.7e-64 250.4 408 38.7
Thecc.07G102200 Theobroma cacao HOM05D004843 ORTHO05D005833 4.9e-64 250.0 275 49.5
AL1G61600 Arabidopsis lyrata HOM05D004843 ORTHO05D005833 5.4e-63 246.5 621 30.4
SEGI_17777 Sequoiadendron giganteum HOM05D004843 ORTHO05D005833 1.2e-62 245.4 563 31.6
CAN.G349.2 Capsicum annuum HOM05D004843 ORTHO05D005833 1.0e-61 242.3 140 80.7
AT1G53200 Arabidopsis thaliana HOM05D004843 ORTHO05D005833 3.9e-61 240.4 561 31.7
Thhalv10011326m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 5.6e-60 236.5 612 29.6
Sp1g39780 Schrenkiella parvula HOM05D004843 ORTHO05D005833 5.6e-60 236.5 623 30.5
C06p14590 Brassica napus HOM05D004843 ORTHO05D005833 1.6e-59 235.0 626 30.2
BcaB02g10938 Brassica carinata HOM05D004843 ORTHO05D005833 1.1e-58 232.3 580 31.4
Atru.chr2.138 Acer truncatum HOM05D004843 ORTHO05D005833 1.4e-58 231.9 218 52.3
BolC6t36637H Brassica oleracea HOM05D004843 ORTHO05D005833 4.0e-58 230.3 653 29.6
BcaC08g44060 Brassica carinata HOM05D004843 ORTHO05D005833 1.2e-57 228.8 626 29.9
A05p18490 Brassica napus HOM05D004843 ORTHO05D005833 4.4e-57 226.9 644 29.3
BraA05t20741Z Brassica rapa HOM05D004843 ORTHO05D005833 1.3e-56 225.3 626 29.6
HPP92_010833 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.1e-55 222.2 401 36.4
HPP92_010831 Vanilla planifolia HOM05D004843 ORTHO05D005833 1.2e-54 218.8 489 32.3
Aqoxy7G02743 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 1.6e-54 218.4 229 48.5
Thecc.07G102000 Theobroma cacao HOM05D004843 ORTHO05D005833 3.0e-53 214.2 234 49.6
Thhalv10028227m.g Eutrema salsugineum HOM05D004843 ORTHO05D005833 1.2e-51 208.8 564 29.6
MBI02_g30880_MAGBIO Magnolia biondii HOM05D004843 ORTHO05D005833 1.2e-51 208.8 435 36.8
Ca_04025_v3 Cicer arietinum L. HOM05D004843 ORTHO05D005833 2.0e-49 201.4 344 36.9
Oeu038157.2 Olea europaea HOM05D004843 ORTHO05D005833 7.1e-47 193.0 240 48.8
DCAR_032123 Daucus carota HOM05D004843 ORTHO05D005833 2.1e-43 181.4 176 50.6
Oeu027285.1 Olea europaea HOM05D004843 ORTHO05D005833 2.6e-41 174.5 165 57.0
Pp3c12_9280 Physcomitrium patens HOM05D004843 ORTHO05D005833 1.5e-36 158.7 573 26.5
Atru.chr2.140 Acer truncatum HOM05D004843 ORTHO05D005833 9.6e-36 156.0 155 49.7
Thecc.07G102300 Theobroma cacao HOM05D004843 ORTHO05D005833 3.6e-35 154.1 209 42.6
A06p01130 Brassica napus HOM05D004843 ORTHO05D005833 8.1e-35 152.9 277 36.8
Aa31sc1038G10 Aethionema arabicum HOM05D004843 ORTHO05D005833 1.5e-33 148.7 477 26.6
BcaC08g43511 Brassica carinata HOM05D004843 ORTHO05D005833 5.4e-31 140.2 455 29.9
C06p08970 Brassica napus HOM05D004843 ORTHO05D005833 2.1e-30 138.3 234 38.5
Thecc.07G101600 Theobroma cacao HOM05D004843 ORTHO05D005833 6.0e-30 136.7 156 48.7
Mapoly0139s0008 Marchantia polymorpha HOM05D004843 ORTHO05D005833 1.0e-29 136.0 575 26.6
BolC6t35976H Brassica oleracea HOM05D004843 ORTHO05D005833 1.8e-29 135.2 243 38.3
Thecc.07G101400 Theobroma cacao HOM05D004843 ORTHO05D005833 1.5e-28 132.1 148 48.0
Oeu029262.1 Olea europaea HOM05D004843 ORTHO05D005833 5.6e-20 103.6 106 55.7
SHI27679 Sapria himalayana HOM05D000105 ORTHO05D000023 3.1e-18 97.8 132 37.1
BraA06t23340Z Brassica rapa HOM05D004843 ORTHO05D005833 1.7e-16 92.0 161 36.6
AagrBONN_evm.TU.Sc2ySwM_228.3860 Anthoceros agrestis HOM05D004843 ORTHO05D005833 2.2e-16 91.7 443 24.2
SHI27676 Sapria himalayana HOM05D004843 ORTHO05D005833 3.2e-15 87.8 368 23.1
Oeu052598.1 Olea europaea HOM05D004843 ORTHO05D005833 7.9e-14 83.2 232 29.7
unitig_26.g10043 Utricularia gibba HOM05D004843 ORTHO05D005833 4.8e-11 73.9 88 48.9
AagrBONN_evm.TU.Sc2ySwM_228.3857 Anthoceros agrestis HOM05D004843 ORTHO05D005833 6.3e-11 73.6 464 22.4
Oeu018912.1 Olea europaea HOM05D004843 ORTHO05D005833 1.4e-10 72.4 47 70.2
Aqoxy7G02744 Aquilegia oxysepala HOM05D004843 ORTHO05D005833 2.0e-09 68.6 66 42.4


User provided reference genes

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